RNA–Protein interactions for RNA: ENST00000497715.1

CUL3-212, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 2,400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-212ENST00000497715 LINC00527Q9UJ94 153 aa4.03□□□□□ -1.76
CUL3-212ENST00000497715 TDRD15B5MCY1 1934 aaKnown RBP4.03□□□□□ -1.76
CUL3-212ENST00000497715 PCDH15Q96QU1 1955 aa4.03□□□□□ -1.76
CUL3-212ENST00000497715 SLIT1O75093 1534 aa4.03□□□□□ -1.76
CUL3-212ENST00000497715 LMO7Q8WWI1 1683 aa4.03□□□□□ -1.76
CUL3-212ENST00000497715 KIAA1671Q9BY89 1806 aa4.03□□□□□ -1.76
CUL3-212ENST00000497715 PLXNB3Q9ULL4 1909 aa4.03□□□□□ -1.76
CUL3-212ENST00000497715 DOCK11Q5JSL3 2073 aa4.03□□□□□ -1.76
CUL3-212ENST00000497715 ARHGEF17Q96PE2 2063 aaPredicted RBP4.03□□□□□ -1.76
CUL3-212ENST00000497715 ZC3H12DA2A288 527 aaKnown RBP4.03□□□□□ -1.76
CUL3-212ENST00000497715 C8orf87E5RJ46 101 aa4.03□□□□□ -1.76
CUL3-212ENST00000497715 INS-IGF2F8WCM5 200 aa4.03□□□□□ -1.76
CUL3-212ENST00000497715 H3BP45 60 aa4.03□□□□□ -1.76
CUL3-212ENST00000497715 EFNA4P52798 201 aa4.03□□□□□ -1.76
CUL3-212ENST00000497715 RRN3P1Q2M238 152 aa4.03□□□□□ -1.76
CUL3-212ENST00000497715 PAPPA-AS1Q5QFB9 102 aa4.03□□□□□ -1.76
CUL3-212ENST00000497715 TMEM207Q6UWW9 146 aa4.03□□□□□ -1.76
CUL3-212ENST00000497715 BCL6BQ8N143 479 aaPredicted RBP4.03□□□□□ -1.76
CUL3-212ENST00000497715 TMEM99Q8N816 258 aa4.03□□□□□ -1.76
CUL3-212ENST00000497715 DCANP1Q8TF63 244 aa4.03□□□□□ -1.76
CUL3-212ENST00000497715 APOOQ9BUR5 198 aa4.03□□□□□ -1.76
CUL3-212ENST00000497715 DPH3P1Q9H4G8 78 aa4.03□□□□□ -1.76
CUL3-212ENST00000497715 OCIAD1Q9NX40 245 aa4.03□□□□□ -1.76
CUL3-212ENST00000497715 LRRC37A3O60309 1634 aa4.03□□□□□ -1.76
CUL3-212ENST00000497715 LRP6O75581 1613 aa4.03□□□□□ -1.76
CUL3-212ENST00000497715 MAST2Q6P0Q8 1798 aa4.03□□□□□ -1.76
CUL3-212ENST00000497715 TRAV2A0A0B4J234 112 aa4.02□□□□□ -1.77
CUL3-212ENST00000497715 A8MWV9 139 aa4.02□□□□□ -1.77
CUL3-212ENST00000497715 M0R1B8 84 aa4.02□□□□□ -1.77
CUL3-212ENST00000497715 SPINK4O60575 86 aa4.02□□□□□ -1.77
CUL3-212ENST00000497715 APCSP02743 223 aa4.02□□□□□ -1.77
CUL3-212ENST00000497715 MGST1P10620 155 aaKnown RBP4.02□□□□□ -1.77
CUL3-212ENST00000497715 EGR2P11161 476 aaPredicted RBP4.02□□□□□ -1.77
CUL3-212ENST00000497715 SP4Q02446 784 aa4.02□□□□□ -1.77
CUL3-212ENST00000497715 BPTFQ12830 3046 aa4.02□□□□□ -1.77
CUL3-212ENST00000497715 EBI3Q14213 229 aa4.02□□□□□ -1.77
CUL3-212ENST00000497715 RSPO4Q2I0M5 234 aaPredicted RBP4.02□□□□□ -1.77
CUL3-212ENST00000497715 SLC25A30Q5SVS4 291 aa4.02□□□□□ -1.77
CUL3-212ENST00000497715 C20orf204Q6ZNR8 217 aa4.02□□□□□ -1.77
CUL3-212ENST00000497715 ZNF584Q8IVC4 421 aa4.02□□□□□ -1.77
CUL3-212ENST00000497715 C1orf158Q8N1D5 194 aa4.02□□□□□ -1.77
CUL3-212ENST00000497715 RYBPQ8N488 228 aaPredicted RBP4.02□□□□□ -1.77
CUL3-212ENST00000497715 LRRC29Q8WV35 223 aa4.02□□□□□ -1.77
CUL3-212ENST00000497715 FXYD5Q96DB9 178 aa4.02□□□□□ -1.77
CUL3-212ENST00000497715 MRPL20Q9BYC9 149 aaKnown RBP4.02□□□□□ -1.77
CUL3-212ENST00000497715 KRTAP4-5Q9BYR2 181 aa4.02□□□□□ -1.77
CUL3-212ENST00000497715 NUP98P52948 1817 aa4.02□□□□□ -1.77
CUL3-212ENST00000497715 DDX60LQ5H9U9 1706 aaKnown RBP4.02□□□□□ -1.77
CUL3-212ENST00000497715 PXDNQ92626 1479 aa4.02□□□□□ -1.77
CUL3-212ENST00000497715 TRAV41A0A0B4J266 112 aa4.02□□□□□ -1.77
CUL3-212ENST00000497715 SLC25A16P16260 332 aa4.02□□□□□ -1.77
CUL3-212ENST00000497715 PI3P19957 117 aa4.02□□□□□ -1.77
CUL3-212ENST00000497715 MPV17P39210 176 aa4.02□□□□□ -1.77
CUL3-212ENST00000497715 FAM120AOSQ5T036 256 aa4.02□□□□□ -1.77
CUL3-212ENST00000497715 CD164L2Q6UWJ8 174 aa4.02□□□□□ -1.77
CUL3-212ENST00000497715 Q6ZS92 163 aa4.02□□□□□ -1.77
CUL3-212ENST00000497715 FP248Q71RG6 208 aaPredicted RBP4.02□□□□□ -1.77
CUL3-212ENST00000497715 SPATA3Q8NHX4 192 aa4.02□□□□□ -1.77
CUL3-212ENST00000497715 TTTY10Q9BZA0 68 aa4.02□□□□□ -1.77
CUL3-212ENST00000497715 BTAF1O14981 1849 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 MYO7AQ13402 2215 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 J3QLW9 94 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 PIN1P1O15428 100 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 SRSF10O75494 262 aaKnown RBP4.01□□□□□ -1.77
CUL3-212ENST00000497715 EPPINO95925 133 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 IGKCP01834 107 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 COX6A1P12074 109 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 PLA2G5P39877 138 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 LIM2P55344 173 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 C22orf39Q6P5X5 142 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 SFTPA2Q8IWL1 248 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 SFTPA1Q8IWL2 248 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 AMN1Q8IY45 258 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 PLA2G12AQ9BZM1 189 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 BCORQ6W2J9 1755 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 NUP214P35658 2090 aaPredicted RBP4.01□□□□□ -1.77
CUL3-212ENST00000497715 RGPD3A6NKT7 1758 aaPredicted RBP4.01□□□□□ -1.77
CUL3-212ENST00000497715 RGPD4Q7Z3J3 1758 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 NRAPQ86VF7 1730 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 H3BVH4 76 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 SMIM22K7EJ46 135 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 FFAR1O14842 300 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 PYYP10082 97 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 PSMB2P49721 201 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 HMGA2P52926 109 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 HERVK_113P61574 105 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 RPL38P63173 70 aaKnown RBP4.01□□□□□ -1.77
CUL3-212ENST00000497715 HBG1P69891 147 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 ZNF726P1Q15940 193 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 RTL8BQ17RB0 113 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 ATP5L2Q7Z4Y8 100 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 RNF182Q8N6D2 247 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 OR9G1Q8NH87 305 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 TMEM230Q96A57 120 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 FOXB1Q99853 325 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 RTL8AQ9BWD3 113 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 AICDAQ9GZX7 198 aa4.01□□□□□ -1.77
CUL3-212ENST00000497715 TCRBV5S1A1TA0A578 114 aa4□□□□□ -1.77
CUL3-212ENST00000497715 KNCNA6PVL3 124 aa4□□□□□ -1.77
CUL3-212ENST00000497715 SCRG1O75711 98 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms