RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 PBDC1Q9BVG4 233 aa10.11□□□□□ -0.79
VARS-228ENST00000495010 KLK11Q9UBX7 282 aa10.11□□□□□ -0.79
VARS-228ENST00000495010 ABCA13Q86UQ4 5058 aa10.1□□□□□ -0.79
VARS-228ENST00000495010 A0A0G2JRQ6 117 aa10.1□□□□□ -0.79
VARS-228ENST00000495010 UCP1P25874 307 aa10.1□□□□□ -0.79
VARS-228ENST00000495010 RORCP51449 518 aa10.1□□□□□ -0.79
VARS-228ENST00000495010 DEFB1P60022 68 aa10.1□□□□□ -0.79
VARS-228ENST00000495010 PSG9Q00887 426 aa10.1□□□□□ -0.79
VARS-228ENST00000495010 TNP2Q05952 138 aa10.1□□□□□ -0.79
VARS-228ENST00000495010 RNASE12Q5GAN4 147 aaKnown RBP10.1□□□□□ -0.79
VARS-228ENST00000495010 SPATA31B1PQ5VZV4 182 aa10.1□□□□□ -0.79
VARS-228ENST00000495010 ARRDC1Q8N5I2 433 aa10.1□□□□□ -0.79
VARS-228ENST00000495010 TMEM208Q9BTX3 173 aa10.1□□□□□ -0.79
VARS-228ENST00000495010 MAGT1Q9H0U3 335 aa10.1□□□□□ -0.79
VARS-228ENST00000495010 SLC35B3Q9H1N7 401 aa10.1□□□□□ -0.79
VARS-228ENST00000495010 PSG1P11464 419 aa10.09□□□□□ -0.79
VARS-228ENST00000495010 PSMB3P49720 205 aa10.09□□□□□ -0.79
VARS-228ENST00000495010 SCGB2B2Q4G0G5 96 aa10.09□□□□□ -0.79
VARS-228ENST00000495010 LHFPL1Q86WI0 220 aa10.09□□□□□ -0.79
VARS-228ENST00000495010 C6orf223Q8N319 242 aa10.09□□□□□ -0.79
VARS-228ENST00000495010 ZNF709Q8N972 641 aa10.09□□□□□ -0.79
VARS-228ENST00000495010 RNF125Q96EQ8 232 aa10.09□□□□□ -0.79
VARS-228ENST00000495010 CLUHP3Q96NS8 147 aa10.09□□□□□ -0.79
VARS-228ENST00000495010 FAM25AB3EWG3 89 aa10.08□□□□□ -0.8
VARS-228ENST00000495010 FAM25CB3EWG5 89 aa10.08□□□□□ -0.8
VARS-228ENST00000495010 FAM25GB3EWG6 89 aa10.08□□□□□ -0.8
VARS-228ENST00000495010 TNFAIP8O95379 198 aa10.08□□□□□ -0.8
VARS-228ENST00000495010 CD3DP04234 171 aa10.08□□□□□ -0.8
VARS-228ENST00000495010 TERB2Q8NHR7 220 aa10.08□□□□□ -0.8
VARS-228ENST00000495010 PPP1R14BQ96C90 147 aa10.08□□□□□ -0.8
VARS-228ENST00000495010 WDR12Q9GZL7 423 aaKnown RBP10.08□□□□□ -0.8
VARS-228ENST00000495010 CACNG5Q9UF02 275 aa10.08□□□□□ -0.8
VARS-228ENST00000495010 NACAE9PAV3 2078 aa10.07□□□□□ -0.8
VARS-228ENST00000495010 TEX13DA0A0J9YY54 714 aaPredicted RBP10.07□□□□□ -0.8
VARS-228ENST00000495010 NBDYA0A0U1RRE5 68 aa10.07□□□□□ -0.8
VARS-228ENST00000495010 CDS2O95674 445 aa10.07□□□□□ -0.8
VARS-228ENST00000495010 OR5AC1P0C628 307 aa10.07□□□□□ -0.8
VARS-228ENST00000495010 ELK1P19419 428 aa10.07□□□□□ -0.8
VARS-228ENST00000495010 TBPP20226 339 aa10.07□□□□□ -0.8
VARS-228ENST00000495010 ZNF79Q15937 498 aa10.07□□□□□ -0.8
VARS-228ENST00000495010 AARDQ4LEZ3 155 aa10.07□□□□□ -0.8
VARS-228ENST00000495010 FAM78BQ5VT40 261 aa10.07□□□□□ -0.8
VARS-228ENST00000495010 OR8G2PQ6IF36 304 aa10.07□□□□□ -0.8
VARS-228ENST00000495010 C1orf158Q8N1D5 194 aa10.07□□□□□ -0.8
VARS-228ENST00000495010 OR13C8Q8NGS7 320 aa10.07□□□□□ -0.8
VARS-228ENST00000495010 RBPMSQ93062 196 aaKnown RBP10.07□□□□□ -0.8
VARS-228ENST00000495010 TMEM222Q9H0R3 208 aa10.07□□□□□ -0.8
VARS-228ENST00000495010 VCX3AQ9NNX9 186 aa10.07□□□□□ -0.8
VARS-228ENST00000495010 CACFD1Q9UGQ2 172 aa10.07□□□□□ -0.8
VARS-228ENST00000495010 C14orf166Q9Y224 244 aaKnown RBP10.07□□□□□ -0.8
VARS-228ENST00000495010 ZFP92A6NM28 416 aa10.06□□□□□ -0.8
VARS-228ENST00000495010 HPGDSO60760 199 aa10.06□□□□□ -0.8
VARS-228ENST00000495010 NXPH3O95157 252 aa10.06□□□□□ -0.8
VARS-228ENST00000495010 NUDT3O95989 172 aa10.06□□□□□ -0.8
VARS-228ENST00000495010 FABP1P07148 127 aa10.06□□□□□ -0.8
VARS-228ENST00000495010 SUPT4H1P63272 117 aaKnown RBP10.06□□□□□ -0.8
VARS-228ENST00000495010 KLF9Q13886 244 aaPredicted RBP10.06□□□□□ -0.8
VARS-228ENST00000495010 Q8N1X5 172 aa10.06□□□□□ -0.8
VARS-228ENST00000495010 MARCH1Q8TCQ1 289 aa10.06□□□□□ -0.8
VARS-228ENST00000495010 GPR146Q96CH1 333 aa10.06□□□□□ -0.8
VARS-228ENST00000495010 ABHD1Q96SE0 405 aa10.06□□□□□ -0.8
VARS-228ENST00000495010 RPRMQ9NS64 109 aa10.06□□□□□ -0.8
VARS-228ENST00000495010 F6UB75 175 aa10.05□□□□□ -0.8
VARS-228ENST00000495010 ISLRO14498 428 aa10.05□□□□□ -0.8
VARS-228ENST00000495010 ALDH3B2P48448 385 aa10.05□□□□□ -0.8
VARS-228ENST00000495010 PAX9P55771 341 aa10.05□□□□□ -0.8
VARS-228ENST00000495010 CCL18P55774 89 aa10.05□□□□□ -0.8
VARS-228ENST00000495010 LYZP61626 148 aa10.05□□□□□ -0.8
VARS-228ENST00000495010 C1orf194Q5T5A4 169 aa10.05□□□□□ -0.8
VARS-228ENST00000495010 SAMD13Q5VXD3 122 aa10.05□□□□□ -0.8
VARS-228ENST00000495010 TMEM268Q5VZI3 342 aa10.05□□□□□ -0.8
VARS-228ENST00000495010 MZT2AQ6P582 158 aa10.05□□□□□ -0.8
VARS-228ENST00000495010 SELENOHQ8IZQ5 122 aaKnown RBP10.05□□□□□ -0.8
VARS-228ENST00000495010 OR8I2Q8N0Y5 310 aa10.05□□□□□ -0.8
VARS-228ENST00000495010 YIPF6Q96EC8 236 aa10.05□□□□□ -0.8
VARS-228ENST00000495010 SCRT2Q9NQ03 307 aa10.05□□□□□ -0.8
VARS-228ENST00000495010 A0A0J9YX75 114 aa10.04□□□□□ -0.8
VARS-228ENST00000495010 LYRM9A8MSI8 78 aa10.04□□□□□ -0.8
VARS-228ENST00000495010 F5H768 121 aa10.04□□□□□ -0.8
VARS-228ENST00000495010 GABARAPH6UMI1 98 aa10.04□□□□□ -0.8
VARS-228ENST00000495010 GABARAPO95166 117 aa10.04□□□□□ -0.8
VARS-228ENST00000495010 RAB3DO95716 219 aa10.04□□□□□ -0.8
VARS-228ENST00000495010 DEFB130BP0DP73 79 aa10.04□□□□□ -0.8
VARS-228ENST00000495010 DEFB130AP0DP74 79 aa10.04□□□□□ -0.8
VARS-228ENST00000495010 TAS2R19P59542 299 aa10.04□□□□□ -0.8
VARS-228ENST00000495010 MEF2DQ14814 521 aa10.04□□□□□ -0.8
VARS-228ENST00000495010 NMSQ5H8A3 153 aa10.04□□□□□ -0.8
VARS-228ENST00000495010 OR52I2Q8NH67 350 aa10.04□□□□□ -0.8
VARS-228ENST00000495010 GLYATL2Q8WU03 294 aa10.04□□□□□ -0.8
VARS-228ENST00000495010 TMEM170AQ8WVE7 144 aa10.04□□□□□ -0.8
VARS-228ENST00000495010 SLC35E1Q96K37 410 aa10.04□□□□□ -0.8
VARS-228ENST00000495010 C16orf92Q96LL3 132 aa10.04□□□□□ -0.8
VARS-228ENST00000495010 NAA60Q9H7X0 242 aa10.04□□□□□ -0.8
VARS-228ENST00000495010 DOK5Q9P104 306 aa10.04□□□□□ -0.8
VARS-228ENST00000495010 MTFP1Q9UDX5 166 aa10.04□□□□□ -0.8
VARS-228ENST00000495010 U3KQ87 197 aa10.04□□□□□ -0.8
VARS-228ENST00000495010 SNRPGP15A8MWD9 76 aa10.03□□□□□ -0.8
VARS-228ENST00000495010 SOCS3O14543 225 aa10.03□□□□□ -0.8
VARS-228ENST00000495010 ATP6V1G2O95670 118 aa10.03□□□□□ -0.8
VARS-228ENST00000495010 SULT1A3P0DMM9 295 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms