RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 UBE2L5PA0A1B0GUS4 154 aa9.56□□□□□ -0.88
SNX17-208ENST00000493711 LGALS9O00182 355 aa9.56□□□□□ -0.88
SNX17-208ENST00000493711 TOMM40O96008 361 aa9.56□□□□□ -0.88
SNX17-208ENST00000493711 FGF7P21781 194 aa9.56□□□□□ -0.88
SNX17-208ENST00000493711 ADMP35318 185 aa9.56□□□□□ -0.88
SNX17-208ENST00000493711 CAMLGP49069 296 aa9.56□□□□□ -0.88
SNX17-208ENST00000493711 TIGITQ495A1 244 aa9.56□□□□□ -0.88
SNX17-208ENST00000493711 PXDC1Q5TGL8 231 aa9.56□□□□□ -0.88
SNX17-208ENST00000493711 C1QL4Q86Z23 238 aa9.56□□□□□ -0.88
SNX17-208ENST00000493711 BPIFCQ8NFQ6 507 aa9.56□□□□□ -0.88
SNX17-208ENST00000493711 GNPNAT1Q96EK6 184 aaPredicted RBP9.56□□□□□ -0.88
SNX17-208ENST00000493711 RAX2Q96IS3 184 aa9.56□□□□□ -0.88
SNX17-208ENST00000493711 CHRDL1Q9BU40 450 aa9.56□□□□□ -0.88
SNX17-208ENST00000493711 SMIM3Q9BZL3 60 aa9.56□□□□□ -0.88
SNX17-208ENST00000493711 WDR61Q9GZS3 305 aaKnown RBP9.56□□□□□ -0.88
SNX17-208ENST00000493711 ARL6Q9H0F7 186 aa9.56□□□□□ -0.88
SNX17-208ENST00000493711 PFDN2Q9UHV9 154 aa9.56□□□□□ -0.88
SNX17-208ENST00000493711 PPP5D1E7EU14 171 aa9.55□□□□□ -0.88
SNX17-208ENST00000493711 AGPAT2O15120 278 aa9.55□□□□□ -0.88
SNX17-208ENST00000493711 BCL2L11O43521 198 aa9.55□□□□□ -0.88
SNX17-208ENST00000493711 OR2C1O95371 312 aa9.55□□□□□ -0.88
SNX17-208ENST00000493711 TRBV12-3P01733 135 aa9.55□□□□□ -0.88
SNX17-208ENST00000493711 PF4P02776 101 aa9.55□□□□□ -0.88
SNX17-208ENST00000493711 CXCL2P19875 107 aa9.55□□□□□ -0.88
SNX17-208ENST00000493711 HOXD3P31249 432 aaPredicted RBP9.55□□□□□ -0.88
SNX17-208ENST00000493711 ELLP55199 621 aaPredicted RBP9.55□□□□□ -0.88
SNX17-208ENST00000493711 CD300CQ08708 224 aa9.55□□□□□ -0.88
SNX17-208ENST00000493711 KLF5Q13887 457 aaPredicted RBP9.55□□□□□ -0.88
SNX17-208ENST00000493711 CYP2G1PQ6ZSU1 146 aa9.55□□□□□ -0.88
SNX17-208ENST00000493711 C18orf65Q6ZTR6 163 aa9.55□□□□□ -0.88
SNX17-208ENST00000493711 TMUB2Q71RG4 321 aa9.55□□□□□ -0.88
SNX17-208ENST00000493711 REC114Q7Z4M0 266 aa9.55□□□□□ -0.88
SNX17-208ENST00000493711 OR51G1Q8NGK1 321 aa9.55□□□□□ -0.88
SNX17-208ENST00000493711 GINS3Q9BRX5 216 aa9.55□□□□□ -0.88
SNX17-208ENST00000493711 UFC1Q9Y3C8 167 aa9.55□□□□□ -0.88
SNX17-208ENST00000493711 IGKV1D-37A0A075B6S9 117 aa9.54□□□□□ -0.88
SNX17-208ENST00000493711 IGKV1OR2-108A0A075B7D4 117 aa9.54□□□□□ -0.88
SNX17-208ENST00000493711 K7EMT4 169 aa9.54□□□□□ -0.88
SNX17-208ENST00000493711 RPL29P47914 159 aaKnown RBP9.54□□□□□ -0.88
SNX17-208ENST00000493711 DEFB136Q30KP8 78 aa9.54□□□□□ -0.88
SNX17-208ENST00000493711 WFDC1Q9HC57 220 aa9.54□□□□□ -0.88
SNX17-208ENST00000493711 PEMTQ9UBM1 199 aa9.54□□□□□ -0.88
SNX17-208ENST00000493711 SLC45A2Q9UMX9 530 aa9.54□□□□□ -0.88
SNX17-208ENST00000493711 RNF24Q9Y225 148 aa9.54□□□□□ -0.88
SNX17-208ENST00000493711 TIMM9Q9Y5J7 89 aa9.54□□□□□ -0.88
SNX17-208ENST00000493711 TET2Q6N021 2002 aaPredicted RBP9.54□□□□□ -0.88
SNX17-208ENST00000493711 LOC100996750A0A140TA64 210 aa9.53□□□□□ -0.88
SNX17-208ENST00000493711 FAM229AH3BQW9 127 aa9.53□□□□□ -0.88
SNX17-208ENST00000493711 YIF1AO95070 293 aa9.53□□□□□ -0.88
SNX17-208ENST00000493711 PSG1P11464 419 aa9.53□□□□□ -0.88
SNX17-208ENST00000493711 BMI1P35226 326 aa9.53□□□□□ -0.88
SNX17-208ENST00000493711 LGALSLQ3ZCW2 172 aaPredicted RBP9.53□□□□□ -0.88
SNX17-208ENST00000493711 Q6ZRG5 221 aa9.53□□□□□ -0.88
SNX17-208ENST00000493711 C9orf62Q8N4C0 152 aa9.53□□□□□ -0.88
SNX17-208ENST00000493711 TMEM190Q8WZ59 177 aa9.53□□□□□ -0.88
SNX17-208ENST00000493711 MARC2Q969Z3 335 aa9.53□□□□□ -0.88
SNX17-208ENST00000493711 NARS2Q96I59 477 aaKnown RBP9.53□□□□□ -0.88
SNX17-208ENST00000493711 MGST2Q99735 147 aa9.53□□□□□ -0.88
SNX17-208ENST00000493711 ELOVL1Q9BW60 279 aa9.53□□□□□ -0.88
SNX17-208ENST00000493711 NPCDR1Q9BY65 106 aa9.53□□□□□ -0.88
SNX17-208ENST00000493711 KRTAP4-6Q9BYQ5 205 aa9.53□□□□□ -0.88
SNX17-208ENST00000493711 DAZ1Q9NQZ3 744 aaKnown RBP9.53□□□□□ -0.88
SNX17-208ENST00000493711 PUS1Q9Y606 427 aaKnown RBP eCLIP9.53□□□□□ -0.88
SNX17-208ENST00000493711 WI2-2373I1.2A0A1W2PRP0 233 aa9.52□□□□□ -0.89
SNX17-208ENST00000493711 ZNF320A2RRD8 509 aa9.52□□□□□ -0.89
SNX17-208ENST00000493711 A8MWP6 167 aa9.52□□□□□ -0.89
SNX17-208ENST00000493711 TSPAN15O95858 294 aa9.52□□□□□ -0.89
SNX17-208ENST00000493711 HNRNPCP07910 306 aaKnown RBP eCLIP9.52□□□□□ -0.89
SNX17-208ENST00000493711 LINC00869P0C866 280 aa9.52□□□□□ -0.89
SNX17-208ENST00000493711 SYNJ2BPP57105 145 aa9.52□□□□□ -0.89
SNX17-208ENST00000493711 PLP1P60201 277 aa9.52□□□□□ -0.89
SNX17-208ENST00000493711 SERF2P84101 59 aa9.52□□□□□ -0.89
SNX17-208ENST00000493711 ZNF90Q03938 601 aa9.52□□□□□ -0.89
SNX17-208ENST00000493711 OPCMLQ14982 345 aa9.52□□□□□ -0.89
SNX17-208ENST00000493711 RPL7L1Q6DKI1 246 aaKnown RBP9.52□□□□□ -0.89
SNX17-208ENST00000493711 EIF5AL1Q6IS14 154 aaKnown RBP9.52□□□□□ -0.89
SNX17-208ENST00000493711 TOMM20LQ6UXN7 152 aa9.52□□□□□ -0.89
SNX17-208ENST00000493711 SLC51BQ86UW2 128 aa9.52□□□□□ -0.89
SNX17-208ENST00000493711 METTL26Q96S19 204 aa9.52□□□□□ -0.89
SNX17-208ENST00000493711 PFDN5Q99471 154 aa9.52□□□□□ -0.89
SNX17-208ENST00000493711 PSMG3Q9BT73 122 aaPredicted RBP9.52□□□□□ -0.89
SNX17-208ENST00000493711 MCRIP2Q9BUT9 160 aaKnown RBP9.52□□□□□ -0.89
SNX17-208ENST00000493711 GGTLC1Q9BX51 225 aa9.52□□□□□ -0.89
SNX17-208ENST00000493711 ZNF471Q9BX82 626 aaPredicted RBP9.52□□□□□ -0.89
SNX17-208ENST00000493711 OVOL1O14753 267 aa9.51□□□□□ -0.89
SNX17-208ENST00000493711 HYPMO75409 117 aa9.51□□□□□ -0.89
SNX17-208ENST00000493711 MBP02144 154 aa9.51□□□□□ -0.89
SNX17-208ENST00000493711 IL4P05112 153 aa9.51□□□□□ -0.89
SNX17-208ENST00000493711 TPT1P13693 172 aaKnown RBP9.51□□□□□ -0.89
SNX17-208ENST00000493711 NPPCP23582 126 aa9.51□□□□□ -0.89
SNX17-208ENST00000493711 SLURP1P55000 103 aa9.51□□□□□ -0.89
SNX17-208ENST00000493711 B2MP61769 119 aa9.51□□□□□ -0.89
SNX17-208ENST00000493711 STPG3Q8N7X2 389 aa9.51□□□□□ -0.89
SNX17-208ENST00000493711 OR1L4Q8NGR5 311 aa9.51□□□□□ -0.89
SNX17-208ENST00000493711 STOML3Q8TAV4 291 aa9.51□□□□□ -0.89
SNX17-208ENST00000493711 DLX4Q92988 240 aaPredicted RBP9.51□□□□□ -0.89
SNX17-208ENST00000493711 RNF125Q96EQ8 232 aa9.51□□□□□ -0.89
SNX17-208ENST00000493711 DUX3Q96PT4 197 aa9.51□□□□□ -0.89
SNX17-208ENST00000493711 C20orf24Q9BUV8 137 aa9.51□□□□□ -0.89
SNX17-208ENST00000493711 ARV1Q9H2C2 271 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms