RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 SCRT2Q9NQ03 307 aa12.46□□□□□ -0.41
NUP50-218ENST00000493456 HEYLQ9NQ87 328 aaPredicted RBP12.46□□□□□ -0.41
NUP50-218ENST00000493456 M0QYG6 137 aa12.45□□□□□ -0.42
NUP50-218ENST00000493456 RPS19P39019 145 aaKnown RBP12.45□□□□□ -0.42
NUP50-218ENST00000493456 RORCP51449 518 aa12.45□□□□□ -0.42
NUP50-218ENST00000493456 PAX9P55771 341 aa12.45□□□□□ -0.42
NUP50-218ENST00000493456 DEFB1P60022 68 aa12.45□□□□□ -0.42
NUP50-218ENST00000493456 SNX29P2Q8IUI4 249 aa12.45□□□□□ -0.42
NUP50-218ENST00000493456 C1orf158Q8N1D5 194 aa12.45□□□□□ -0.42
NUP50-218ENST00000493456 CCDC71LQ8N9Z2 235 aa12.45□□□□□ -0.42
NUP50-218ENST00000493456 ZNRF2Q8NHG8 242 aa12.45□□□□□ -0.42
NUP50-218ENST00000493456 NPIPB3Q92617 1050 aa12.45□□□□□ -0.42
NUP50-218ENST00000493456 SLC35B3Q9H1N7 401 aa12.45□□□□□ -0.42
NUP50-218ENST00000493456 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.45□□□□□ -0.42
NUP50-218ENST00000493456 COPZ2Q9P299 210 aa12.45□□□□□ -0.42
NUP50-218ENST00000493456 KLK11Q9UBX7 282 aa12.45□□□□□ -0.42
NUP50-218ENST00000493456 PSG1P11464 419 aa12.44□□□□□ -0.42
NUP50-218ENST00000493456 TGFBR1P36897 503 aa12.44□□□□□ -0.42
NUP50-218ENST00000493456 NEDD8Q15843 81 aa12.44□□□□□ -0.42
NUP50-218ENST00000493456 SP6Q3SY56 376 aa12.44□□□□□ -0.42
NUP50-218ENST00000493456 OR8G2PQ6IF36 304 aa12.44□□□□□ -0.42
NUP50-218ENST00000493456 EBLN2Q6P2I7 272 aa12.44□□□□□ -0.42
NUP50-218ENST00000493456 NOXA1Q86UR1 476 aa12.44□□□□□ -0.42
NUP50-218ENST00000493456 ARRDC1Q8N5I2 433 aa12.44□□□□□ -0.42
NUP50-218ENST00000493456 OR51G1Q8NGK1 321 aa12.44□□□□□ -0.42
NUP50-218ENST00000493456 RNF125Q96EQ8 232 aa12.44□□□□□ -0.42
NUP50-218ENST00000493456 WDR12Q9GZL7 423 aaKnown RBP12.44□□□□□ -0.42
NUP50-218ENST00000493456 Q9H521 79 aa12.44□□□□□ -0.42
NUP50-218ENST00000493456 NXPH3O95157 252 aa12.43□□□□□ -0.42
NUP50-218ENST00000493456 APOA1P02647 267 aa12.43□□□□□ -0.42
NUP50-218ENST00000493456 RNASE10Q5GAN6 216 aaKnown RBP12.43□□□□□ -0.42
NUP50-218ENST00000493456 ZFAND1Q8TCF1 268 aa12.43□□□□□ -0.42
NUP50-218ENST00000493456 ACY3Q96HD9 319 aa12.43□□□□□ -0.42
NUP50-218ENST00000493456 MAGT1Q9H0U3 335 aa12.43□□□□□ -0.42
NUP50-218ENST00000493456 LYRM9A8MSI8 78 aa12.42□□□□□ -0.42
NUP50-218ENST00000493456 CEBPZOSA8MTT3 80 aa12.42□□□□□ -0.42
NUP50-218ENST00000493456 SOCS3O14543 225 aa12.42□□□□□ -0.42
NUP50-218ENST00000493456 SUPT4H1P63272 117 aaKnown RBP12.42□□□□□ -0.42
NUP50-218ENST00000493456 C1orf194Q5T5A4 169 aa12.42□□□□□ -0.42
NUP50-218ENST00000493456 FAM78BQ5VT40 261 aa12.42□□□□□ -0.42
NUP50-218ENST00000493456 SAMD13Q5VXD3 122 aa12.42□□□□□ -0.42
NUP50-218ENST00000493456 TMEM208Q9BTX3 173 aa12.42□□□□□ -0.42
NUP50-218ENST00000493456 CACFD1Q9UGQ2 172 aa12.42□□□□□ -0.42
NUP50-218ENST00000493456 ISLRO14498 428 aa12.41□□□□□ -0.42
NUP50-218ENST00000493456 CDS2O95674 445 aa12.41□□□□□ -0.42
NUP50-218ENST00000493456 TBPP20226 339 aa12.41□□□□□ -0.42
NUP50-218ENST00000493456 CCL18P55774 89 aa12.41□□□□□ -0.42
NUP50-218ENST00000493456 SPATA12Q7Z6I5 190 aa12.41□□□□□ -0.42
NUP50-218ENST00000493456 TMEM170AQ8WVE7 144 aa12.41□□□□□ -0.42
NUP50-218ENST00000493456 PBDC1Q9BVG4 233 aa12.41□□□□□ -0.42
NUP50-218ENST00000493456 TMEM222Q9H0R3 208 aa12.41□□□□□ -0.42
NUP50-218ENST00000493456 COMMD3Q9UBI1 195 aa12.41□□□□□ -0.42
NUP50-218ENST00000493456 A0A0J9YX75 114 aa12.4□□□□□ -0.42
NUP50-218ENST00000493456 RBPMSQ93062 196 aaKnown RBP12.4□□□□□ -0.42
NUP50-218ENST00000493456 GPR146Q96CH1 333 aa12.4□□□□□ -0.42
NUP50-218ENST00000493456 IGF2BP2-AS1Q96M15 143 aa12.4□□□□□ -0.42
NUP50-218ENST00000493456 ABHD1Q96SE0 405 aa12.4□□□□□ -0.42
NUP50-218ENST00000493456 RPRMQ9NS64 109 aa12.4□□□□□ -0.42
NUP50-218ENST00000493456 CACNG5Q9UF02 275 aa12.4□□□□□ -0.42
NUP50-218ENST00000493456 F6UB75 175 aa12.39□□□□□ -0.43
NUP50-218ENST00000493456 NUDT3O95989 172 aa12.39□□□□□ -0.43
NUP50-218ENST00000493456 NMSQ5H8A3 153 aa12.39□□□□□ -0.43
NUP50-218ENST00000493456 OR13C8Q8NGS7 320 aa12.39□□□□□ -0.43
NUP50-218ENST00000493456 DOK5Q9P104 306 aa12.39□□□□□ -0.43
NUP50-218ENST00000493456 A8MTW9 85 aa12.38□□□□□ -0.43
NUP50-218ENST00000493456 CD3DP04234 171 aa12.38□□□□□ -0.43
NUP50-218ENST00000493456 OR5AC1P0C628 307 aa12.38□□□□□ -0.43
NUP50-218ENST00000493456 MEOX2P50222 304 aa12.38□□□□□ -0.43
NUP50-218ENST00000493456 TERB2Q8NHR7 220 aa12.38□□□□□ -0.43
NUP50-218ENST00000493456 DMBT1Q9UGM3 2413 aaPredicted RBP12.37□□□□□ -0.43
NUP50-218ENST00000493456 ZFP92A6NM28 416 aa12.37□□□□□ -0.43
NUP50-218ENST00000493456 F5H768 121 aa12.37□□□□□ -0.43
NUP50-218ENST00000493456 FABP1P07148 127 aa12.37□□□□□ -0.43
NUP50-218ENST00000493456 TSPOP30536 169 aa12.37□□□□□ -0.43
NUP50-218ENST00000493456 B2MP61769 119 aa12.37□□□□□ -0.43
NUP50-218ENST00000493456 LSM3P62310 102 aaKnown RBP12.37□□□□□ -0.43
NUP50-218ENST00000493456 KLF9Q13886 244 aaPredicted RBP12.37□□□□□ -0.43
NUP50-218ENST00000493456 LHFPL5Q8TAF8 219 aa12.37□□□□□ -0.43
NUP50-218ENST00000493456 GLYATL2Q8WU03 294 aa12.37□□□□□ -0.43
NUP50-218ENST00000493456 LINC00588Q9Y4M8 146 aa12.37□□□□□ -0.43
NUP50-218ENST00000493456 U3KQ87 197 aa12.37□□□□□ -0.43
NUP50-218ENST00000493456 TNFAIP8O95379 198 aa12.36□□□□□ -0.43
NUP50-218ENST00000493456 INSP01308 110 aa12.36□□□□□ -0.43
NUP50-218ENST00000493456 DEFB130BP0DP73 79 aa12.36□□□□□ -0.43
NUP50-218ENST00000493456 DEFB130AP0DP74 79 aa12.36□□□□□ -0.43
NUP50-218ENST00000493456 ELK1P19419 428 aa12.36□□□□□ -0.43
NUP50-218ENST00000493456 LYZP61626 148 aa12.36□□□□□ -0.43
NUP50-218ENST00000493456 TTC32Q5I0X7 151 aa12.36□□□□□ -0.43
NUP50-218ENST00000493456 AMTNQ6UX39 209 aa12.36□□□□□ -0.43
NUP50-218ENST00000493456 OR8I2Q8N0Y5 310 aa12.36□□□□□ -0.43
NUP50-218ENST00000493456 OR4C16Q8NGL9 310 aa12.36□□□□□ -0.43
NUP50-218ENST00000493456 MARCH1Q8TCQ1 289 aa12.36□□□□□ -0.43
NUP50-218ENST00000493456 TEX13DA0A0J9YY54 714 aaPredicted RBP12.35□□□□□ -0.43
NUP50-218ENST00000493456 ATP5G1P05496 136 aa12.35□□□□□ -0.43
NUP50-218ENST00000493456 ATP5G3P48201 142 aa12.35□□□□□ -0.43
NUP50-218ENST00000493456 ZNF90Q03938 601 aa12.35□□□□□ -0.43
NUP50-218ENST00000493456 SCGB2B2Q4G0G5 96 aa12.35□□□□□ -0.43
NUP50-218ENST00000493456 RNASE12Q5GAN4 147 aaKnown RBP12.35□□□□□ -0.43
NUP50-218ENST00000493456 SELENOHQ8IZQ5 122 aaKnown RBP12.35□□□□□ -0.43
NUP50-218ENST00000493456 PPP1R14BQ96C90 147 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms