RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 AGPAT2O15120 278 aa12.03□□□□□ -0.48
HPS4-216ENST00000493455 SAP30O75446 220 aa12.03□□□□□ -0.48
HPS4-216ENST00000493455 CAMLGP49069 296 aa12.03□□□□□ -0.48
HPS4-216ENST00000493455 RAB31Q13636 194 aa12.03□□□□□ -0.48
HPS4-216ENST00000493455 VWC2Q2TAL6 325 aa12.03□□□□□ -0.48
HPS4-216ENST00000493455 TMEM182Q6ZP80 229 aaPredicted RBP12.03□□□□□ -0.48
HPS4-216ENST00000493455 BPIFCQ8NFQ6 507 aa12.03□□□□□ -0.48
HPS4-216ENST00000493455 OR9G4Q8NGQ1 327 aa12.03□□□□□ -0.48
HPS4-216ENST00000493455 SCGB1C1Q8TD33 95 aa12.03□□□□□ -0.48
HPS4-216ENST00000493455 DOK5Q9P104 306 aa12.03□□□□□ -0.48
HPS4-216ENST00000493455 UFC1Q9Y3C8 167 aa12.03□□□□□ -0.48
HPS4-216ENST00000493455 HMSDA8MTL9 139 aa12.02□□□□□ -0.49
HPS4-216ENST00000493455 SEC14L6B5MCN3 397 aa12.02□□□□□ -0.49
HPS4-216ENST00000493455 IGLL1P15814 213 aa12.02□□□□□ -0.49
HPS4-216ENST00000493455 CXCL2P19875 107 aa12.02□□□□□ -0.49
HPS4-216ENST00000493455 MIC13Q5XKP0 118 aa12.02□□□□□ -0.49
HPS4-216ENST00000493455 REC114Q7Z4M0 266 aa12.02□□□□□ -0.49
HPS4-216ENST00000493455 ZNF414Q96IQ9 312 aa12.02□□□□□ -0.49
HPS4-216ENST00000493455 GINS3Q9BRX5 216 aa12.02□□□□□ -0.49
HPS4-216ENST00000493455 ELOVL1Q9BW60 279 aa12.02□□□□□ -0.49
HPS4-216ENST00000493455 ZFAND3Q9H8U3 227 aa12.02□□□□□ -0.49
HPS4-216ENST00000493455 IGHV3-66A0A0C4DH42 116 aa12.01□□□□□ -0.49
HPS4-216ENST00000493455 LGALS9O00182 355 aa12.01□□□□□ -0.49
HPS4-216ENST00000493455 LINC00869P0C866 280 aa12.01□□□□□ -0.49
HPS4-216ENST00000493455 ORM2P19652 201 aa12.01□□□□□ -0.49
HPS4-216ENST00000493455 NKX2-5P52952 324 aaPredicted RBP12.01□□□□□ -0.49
HPS4-216ENST00000493455 ZNF709Q8N972 641 aa12.01□□□□□ -0.49
HPS4-216ENST00000493455 HSD17B11Q8NBQ5 300 aa12.01□□□□□ -0.49
HPS4-216ENST00000493455 OR1B1Q8NGR6 318 aa12.01□□□□□ -0.49
HPS4-216ENST00000493455 PPP1R14BQ96C90 147 aa12.01□□□□□ -0.49
HPS4-216ENST00000493455 RNF125Q96EQ8 232 aa12.01□□□□□ -0.49
HPS4-216ENST00000493455 HYLS1Q96M11 299 aa12.01□□□□□ -0.49
HPS4-216ENST00000493455 GGTLC1Q9BX51 225 aa12.01□□□□□ -0.49
HPS4-216ENST00000493455 NPCDR1Q9BY65 106 aa12.01□□□□□ -0.49
HPS4-216ENST00000493455 WDR61Q9GZS3 305 aaKnown RBP12.01□□□□□ -0.49
HPS4-216ENST00000493455 ARL6Q9H0F7 186 aa12.01□□□□□ -0.49
HPS4-216ENST00000493455 LSM4Q9Y4Z0 139 aaKnown RBP12.01□□□□□ -0.49
HPS4-216ENST00000493455 BORCS7-ASMTA0A0B4J1R7 106 aa12□□□□□ -0.49
HPS4-216ENST00000493455 KANTRA0A1W2PQU2 76 aa12□□□□□ -0.49
HPS4-216ENST00000493455 C2orf70A6NJV1 201 aa12□□□□□ -0.49
HPS4-216ENST00000493455 ZNF266Q14584 549 aa12□□□□□ -0.49
HPS4-216ENST00000493455 USF2Q15853 346 aaPredicted RBP12□□□□□ -0.49
HPS4-216ENST00000493455 RPL7L1Q6DKI1 246 aaKnown RBP12□□□□□ -0.49
HPS4-216ENST00000493455 KCNRGQ8N5I3 272 aa12□□□□□ -0.49
HPS4-216ENST00000493455 DYNLRB2Q8TF09 96 aa12□□□□□ -0.49
HPS4-216ENST00000493455 METTL26Q96S19 204 aa12□□□□□ -0.49
HPS4-216ENST00000493455 ARPC5LQ9BPX5 153 aa12□□□□□ -0.49
HPS4-216ENST00000493455 RSG1Q9BU20 258 aa12□□□□□ -0.49
HPS4-216ENST00000493455 DAZ1Q9NQZ3 744 aaKnown RBP12□□□□□ -0.49
HPS4-216ENST00000493455 A0A0D9SG52 128 aa11.99□□□□□ -0.49
HPS4-216ENST00000493455 TMEM213A2RRL7 107 aa11.99□□□□□ -0.49
HPS4-216ENST00000493455 A8MWP6 167 aa11.99□□□□□ -0.49
HPS4-216ENST00000493455 C17orf112F2Z3M2 114 aa11.99□□□□□ -0.49
HPS4-216ENST00000493455 CSN3P07498 182 aa11.99□□□□□ -0.49
HPS4-216ENST00000493455 OR5G3P0C626 314 aa11.99□□□□□ -0.49
HPS4-216ENST00000493455 FOLR2P14207 255 aa11.99□□□□□ -0.49
HPS4-216ENST00000493455 SELENOTP62341 195 aa11.99□□□□□ -0.49
HPS4-216ENST00000493455 PRR31Q5SQ13 230 aa11.99□□□□□ -0.49
HPS4-216ENST00000493455 TMUB2Q71RG4 321 aa11.99□□□□□ -0.49
HPS4-216ENST00000493455 STPG3Q8N7X2 389 aa11.99□□□□□ -0.49
HPS4-216ENST00000493455 RABAC1Q9UI14 185 aa11.99□□□□□ -0.49
HPS4-216ENST00000493455 SLC45A2Q9UMX9 530 aa11.99□□□□□ -0.49
HPS4-216ENST00000493455 RFNGQ9Y644 331 aa11.99□□□□□ -0.49
HPS4-216ENST00000493455 PXMP4Q9Y6I8 212 aa11.99□□□□□ -0.49
HPS4-216ENST00000493455 WI2-2373I1.2A0A1W2PRP0 233 aa11.98□□□□□ -0.49
HPS4-216ENST00000493455 MPDU1O75352 247 aa11.98□□□□□ -0.49
HPS4-216ENST00000493455 APOHP02749 345 aaPredicted RBP11.98□□□□□ -0.49
HPS4-216ENST00000493455 HNRNPCP07910 306 aaKnown RBP eCLIP11.98□□□□□ -0.49
HPS4-216ENST00000493455 NPPCP23582 126 aa11.98□□□□□ -0.49
HPS4-216ENST00000493455 ELLP55199 621 aaPredicted RBP11.98□□□□□ -0.49
HPS4-216ENST00000493455 B2MP61769 119 aa11.98□□□□□ -0.49
HPS4-216ENST00000493455 ZNF345Q14585 488 aa11.98□□□□□ -0.49
HPS4-216ENST00000493455 OPCMLQ14982 345 aa11.98□□□□□ -0.49
HPS4-216ENST00000493455 NARS2Q96I59 477 aaKnown RBP11.98□□□□□ -0.49
HPS4-216ENST00000493455 ZNF471Q9BX82 626 aaPredicted RBP11.98□□□□□ -0.49
HPS4-216ENST00000493455 ANK2Q01484 3957 aa11.97□□□□□ -0.49
HPS4-216ENST00000493455 IGHV7-4-1A0A0J9YVY3 117 aa11.97□□□□□ -0.49
HPS4-216ENST00000493455 TAAR5O14804 337 aa11.97□□□□□ -0.49
HPS4-216ENST00000493455 BCL2L11O43521 198 aa11.97□□□□□ -0.49
HPS4-216ENST00000493455 COX7A2P2O60397 106 aa11.97□□□□□ -0.49
HPS4-216ENST00000493455 CBLN1P23435 193 aa11.97□□□□□ -0.49
HPS4-216ENST00000493455 LGALSLQ3ZCW2 172 aaPredicted RBP11.97□□□□□ -0.49
HPS4-216ENST00000493455 C9orf66Q5T8R8 295 aa11.97□□□□□ -0.49
HPS4-216ENST00000493455 IL34Q6ZMJ4 242 aa11.97□□□□□ -0.49
HPS4-216ENST00000493455 Q6ZRG5 221 aa11.97□□□□□ -0.49
HPS4-216ENST00000493455 MCRIP2Q9BUT9 160 aaKnown RBP11.97□□□□□ -0.49
HPS4-216ENST00000493455 SLC39A9Q9NUM3 307 aa11.97□□□□□ -0.49
HPS4-216ENST00000493455 VWFP04275 2813 aa11.97□□□□□ -0.49
HPS4-216ENST00000493455 K7EMT4 169 aa11.96□□□□□ -0.49
HPS4-216ENST00000493455 HYPMO75409 117 aa11.96□□□□□ -0.49
HPS4-216ENST00000493455 CFDP00746 253 aaPredicted RBP11.96□□□□□ -0.49
HPS4-216ENST00000493455 OXLD1Q5BKU9 147 aa11.96□□□□□ -0.49
HPS4-216ENST00000493455 FFAR4Q5NUL3 377 aa11.96□□□□□ -0.49
HPS4-216ENST00000493455 ADAMTSL5Q6ZMM2 481 aa11.96□□□□□ -0.49
HPS4-216ENST00000493455 ST8SIA2Q92186 375 aa11.96□□□□□ -0.49
HPS4-216ENST00000493455 UHRF2Q96PU4 802 aa11.96□□□□□ -0.49
HPS4-216ENST00000493455 RHPN1-AS1Q9BWJ2 59 aa11.96□□□□□ -0.49
HPS4-216ENST00000493455 KCNIP2Q9NS61 270 aa11.96□□□□□ -0.49
HPS4-216ENST00000493455 MRPL27Q9P0M9 148 aaKnown RBP11.96□□□□□ -0.49
HPS4-216ENST00000493455 HIGD1AQ9Y241 93 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms