RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 FAM106AQ4KMX7 169 aa14.3□□□□□ -0.12
MCF2L-230ENST00000491028 ZNF709Q8N972 641 aa14.3□□□□□ -0.12
MCF2L-230ENST00000491028 BPIFCQ8NFQ6 507 aa14.3□□□□□ -0.12
MCF2L-230ENST00000491028 MDFIQ99750 246 aa14.3□□□□□ -0.12
MCF2L-230ENST00000491028 ZNF471Q9BX82 626 aaPredicted RBP14.3□□□□□ -0.12
MCF2L-230ENST00000491028 SLC45A2Q9UMX9 530 aa14.3□□□□□ -0.12
MCF2L-230ENST00000491028 TIMM9Q9Y5J7 89 aa14.3□□□□□ -0.12
MCF2L-230ENST00000491028 PSG1P11464 419 aa14.29□□□□□ -0.12
MCF2L-230ENST00000491028 HSD17B11Q8NBQ5 300 aa14.29□□□□□ -0.12
MCF2L-230ENST00000491028 OR51G1Q8NGK1 321 aa14.29□□□□□ -0.12
MCF2L-230ENST00000491028 ZNF414Q96IQ9 312 aa14.29□□□□□ -0.12
MCF2L-230ENST00000491028 ARV1Q9H2C2 271 aa14.29□□□□□ -0.12
MCF2L-230ENST00000491028 PUS1Q9Y606 427 aaKnown RBP eCLIP14.29□□□□□ -0.12
MCF2L-230ENST00000491028 TENM1Q9UKZ4 2725 aa14.29□□□□□ -0.12
MCF2L-230ENST00000491028 DNHD1Q96M86 4753 aa14.29□□□□□ -0.12
MCF2L-230ENST00000491028 PRR20EP86478 221 aa14.28□□□□□ -0.12
MCF2L-230ENST00000491028 PRR20CP86479 221 aa14.28□□□□□ -0.12
MCF2L-230ENST00000491028 PRR20DP86480 221 aa14.28□□□□□ -0.12
MCF2L-230ENST00000491028 PRR20BP86481 221 aa14.28□□□□□ -0.12
MCF2L-230ENST00000491028 PRR20AP86496 221 aa14.28□□□□□ -0.12
MCF2L-230ENST00000491028 REC114Q7Z4M0 266 aa14.28□□□□□ -0.12
MCF2L-230ENST00000491028 SLC51BQ86UW2 128 aa14.28□□□□□ -0.12
MCF2L-230ENST00000491028 C1QL4Q86Z23 238 aa14.28□□□□□ -0.12
MCF2L-230ENST00000491028 STOML3Q8TAV4 291 aa14.28□□□□□ -0.12
MCF2L-230ENST00000491028 TMEM190Q8WZ59 177 aa14.28□□□□□ -0.12
MCF2L-230ENST00000491028 GNPNAT1Q96EK6 184 aaPredicted RBP14.28□□□□□ -0.12
MCF2L-230ENST00000491028 DUX3Q96PT4 197 aa14.28□□□□□ -0.12
MCF2L-230ENST00000491028 GINS3Q9BRX5 216 aa14.28□□□□□ -0.12
MCF2L-230ENST00000491028 PSMG3Q9BT73 122 aaPredicted RBP14.28□□□□□ -0.12
MCF2L-230ENST00000491028 RSG1Q9BU20 258 aa14.28□□□□□ -0.12
MCF2L-230ENST00000491028 ZFAND3Q9H8U3 227 aa14.28□□□□□ -0.12
MCF2L-230ENST00000491028 IGHV3-35A0A0C4DH35 117 aa14.27□□□□□ -0.13
MCF2L-230ENST00000491028 LGALS9O00182 355 aa14.27□□□□□ -0.13
MCF2L-230ENST00000491028 YIF1AO95070 293 aa14.27□□□□□ -0.13
MCF2L-230ENST00000491028 PF4P02776 101 aa14.27□□□□□ -0.13
MCF2L-230ENST00000491028 LINC00869P0C866 280 aa14.27□□□□□ -0.13
MCF2L-230ENST00000491028 TPT1P13693 172 aaKnown RBP14.27□□□□□ -0.13
MCF2L-230ENST00000491028 ATP6V0CP27449 155 aa14.27□□□□□ -0.13
MCF2L-230ENST00000491028 SLURP1P55000 103 aa14.27□□□□□ -0.13
MCF2L-230ENST00000491028 KLF5Q13887 457 aaPredicted RBP14.27□□□□□ -0.13
MCF2L-230ENST00000491028 PXDC1Q5TGL8 231 aa14.27□□□□□ -0.13
MCF2L-230ENST00000491028 TOMM20LQ6UXN7 152 aa14.27□□□□□ -0.13
MCF2L-230ENST00000491028 STPG3Q8N7X2 389 aa14.27□□□□□ -0.13
MCF2L-230ENST00000491028 PXMP4Q9Y6I8 212 aa14.27□□□□□ -0.13
MCF2L-230ENST00000491028 WI2-2373I1.2A0A1W2PRP0 233 aa14.26□□□□□ -0.13
MCF2L-230ENST00000491028 M0QZ24 198 aa14.26□□□□□ -0.13
MCF2L-230ENST00000491028 TSPAN15O95858 294 aa14.26□□□□□ -0.13
MCF2L-230ENST00000491028 IL4P05112 153 aa14.26□□□□□ -0.13
MCF2L-230ENST00000491028 GATA2P23769 480 aaPredicted RBP14.26□□□□□ -0.13
MCF2L-230ENST00000491028 PLP1P60201 277 aa14.26□□□□□ -0.13
MCF2L-230ENST00000491028 B2MP61769 119 aa14.26□□□□□ -0.13
MCF2L-230ENST00000491028 MIC13Q5XKP0 118 aa14.26□□□□□ -0.13
MCF2L-230ENST00000491028 TMEM182Q6ZP80 229 aaPredicted RBP14.26□□□□□ -0.13
MCF2L-230ENST00000491028 BAP18Q8IXM2 172 aa14.26□□□□□ -0.13
MCF2L-230ENST00000491028 SPATA3Q8NHX4 192 aa14.26□□□□□ -0.13
MCF2L-230ENST00000491028 RNF125Q96EQ8 232 aa14.26□□□□□ -0.13
MCF2L-230ENST00000491028 SLC39A9Q9NUM3 307 aa14.26□□□□□ -0.13
MCF2L-230ENST00000491028 A8MWP6 167 aa14.25□□□□□ -0.13
MCF2L-230ENST00000491028 ELLP55199 621 aaPredicted RBP14.25□□□□□ -0.13
MCF2L-230ENST00000491028 SYNJ2BPP57105 145 aa14.25□□□□□ -0.13
MCF2L-230ENST00000491028 UNQ9165/PRO28630Q6UXU0 137 aa14.25□□□□□ -0.13
MCF2L-230ENST00000491028 Q6ZRG5 221 aa14.25□□□□□ -0.13
MCF2L-230ENST00000491028 OR2G3Q8NGZ4 309 aa14.25□□□□□ -0.13
MCF2L-230ENST00000491028 RCC1LQ96I51 464 aaKnown RBP14.25□□□□□ -0.13
MCF2L-230ENST00000491028 UFC1Q9Y3C8 167 aa14.25□□□□□ -0.13
MCF2L-230ENST00000491028 COL6A5A8TX70 2615 aa14.24□□□□□ -0.13
MCF2L-230ENST00000491028 K7EMT4 169 aa14.24□□□□□ -0.13
MCF2L-230ENST00000491028 LYZP61626 148 aa14.24□□□□□ -0.13
MCF2L-230ENST00000491028 SERF2P84101 59 aa14.24□□□□□ -0.13
MCF2L-230ENST00000491028 ST8SIA2Q92186 375 aa14.24□□□□□ -0.13
MCF2L-230ENST00000491028 DLX4Q92988 240 aaPredicted RBP14.24□□□□□ -0.13
MCF2L-230ENST00000491028 PEMTQ9UBM1 199 aa14.24□□□□□ -0.13
MCF2L-230ENST00000491028 ZNF320A2RRD8 509 aa14.23□□□□□ -0.13
MCF2L-230ENST00000491028 SEC11BP0C7V7 166 aa14.23□□□□□ -0.13
MCF2L-230ENST00000491028 SPP1P10451 314 aa14.23□□□□□ -0.13
MCF2L-230ENST00000491028 USF2Q15853 346 aaPredicted RBP14.23□□□□□ -0.13
MCF2L-230ENST00000491028 FFAR4Q5NUL3 377 aa14.23□□□□□ -0.13
MCF2L-230ENST00000491028 S100A7AQ86SG5 101 aa14.23□□□□□ -0.13
MCF2L-230ENST00000491028 OR1L4Q8NGR5 311 aa14.23□□□□□ -0.13
MCF2L-230ENST00000491028 C20orf24Q9BUV8 137 aa14.23□□□□□ -0.13
MCF2L-230ENST00000491028 PBDC1Q9BVG4 233 aa14.23□□□□□ -0.13
MCF2L-230ENST00000491028 SH3BGRL3Q9H299 93 aa14.23□□□□□ -0.13
MCF2L-230ENST00000491028 DAZ1Q9NQZ3 744 aaKnown RBP14.23□□□□□ -0.13
MCF2L-230ENST00000491028 BOLA1Q9Y3E2 137 aa14.23□□□□□ -0.13
MCF2L-230ENST00000491028 ELOA3CA0A087WX78 387 aaPredicted RBP14.22□□□□□ -0.13
MCF2L-230ENST00000491028 OVOL1O14753 267 aa14.22□□□□□ -0.13
MCF2L-230ENST00000491028 S100A7P31151 101 aa14.22□□□□□ -0.13
MCF2L-230ENST00000491028 EIF5AL1Q6IS14 154 aaKnown RBP14.22□□□□□ -0.13
MCF2L-230ENST00000491028 LINC00482Q8N8I6 264 aa14.22□□□□□ -0.13
MCF2L-230ENST00000491028 OR9G4Q8NGQ1 327 aa14.22□□□□□ -0.13
MCF2L-230ENST00000491028 OR1B1Q8NGR6 318 aa14.22□□□□□ -0.13
MCF2L-230ENST00000491028 METTL26Q96S19 204 aa14.22□□□□□ -0.13
MCF2L-230ENST00000491028 PFDN5Q99471 154 aa14.22□□□□□ -0.13
MCF2L-230ENST00000491028 SLC25A32Q9H2D1 315 aa14.22□□□□□ -0.13
MCF2L-230ENST00000491028 RABAC1Q9UI14 185 aa14.22□□□□□ -0.13
MCF2L-230ENST00000491028 COX7A2P2O60397 106 aa14.21□□□□□ -0.13
MCF2L-230ENST00000491028 HYPMO75409 117 aa14.21□□□□□ -0.13
MCF2L-230ENST00000491028 MBP02144 154 aa14.21□□□□□ -0.13
MCF2L-230ENST00000491028 ORM2P19652 201 aa14.21□□□□□ -0.13
MCF2L-230ENST00000491028 ACOT6Q3I5F7 207 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms