RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 TMEM268Q5VZI3 342 aa7.13□□□□□ -1.27
TMEM39A-210ENST00000490099 LGI3Q8N145 548 aa7.13□□□□□ -1.27
TMEM39A-210ENST00000490099 C12orf45Q8N5I9 185 aaPredicted RBP7.13□□□□□ -1.27
TMEM39A-210ENST00000490099 MITD1Q8WV92 249 aa7.13□□□□□ -1.27
TMEM39A-210ENST00000490099 SEC22CQ9BRL7 303 aa7.13□□□□□ -1.27
TMEM39A-210ENST00000490099 MRPL18Q9H0U6 180 aaKnown RBP7.13□□□□□ -1.27
TMEM39A-210ENST00000490099 ENY2Q9NPA8 101 aa7.13□□□□□ -1.27
TMEM39A-210ENST00000490099 SHPKQ9UHJ6 478 aa7.13□□□□□ -1.27
TMEM39A-210ENST00000490099 RPS10-NUDT3A0A1W2PQS6 291 aa7.12□□□□□ -1.27
TMEM39A-210ENST00000490099 A0A1W2PS18 150 aa7.12□□□□□ -1.27
TMEM39A-210ENST00000490099 K7EQG2 157 aa7.12□□□□□ -1.27
TMEM39A-210ENST00000490099 PITX3O75364 302 aa7.12□□□□□ -1.27
TMEM39A-210ENST00000490099 JTBO76095 146 aa7.12□□□□□ -1.27
TMEM39A-210ENST00000490099 NXPH3O95157 252 aa7.12□□□□□ -1.27
TMEM39A-210ENST00000490099 GIG44P09565 113 aaPredicted RBP7.12□□□□□ -1.27
TMEM39A-210ENST00000490099 SULT1A3P0DMM9 295 aa7.12□□□□□ -1.27
TMEM39A-210ENST00000490099 SULT1A4P0DMN0 295 aa7.12□□□□□ -1.27
TMEM39A-210ENST00000490099 OPRK1P41145 380 aa7.12□□□□□ -1.27
TMEM39A-210ENST00000490099 TFPI2P48307 235 aa7.12□□□□□ -1.27
TMEM39A-210ENST00000490099 ATP5IP56385 69 aaPredicted RBP7.12□□□□□ -1.27
TMEM39A-210ENST00000490099 TIGITQ495A1 244 aa7.12□□□□□ -1.27
TMEM39A-210ENST00000490099 CEMP1Q6PRD7 247 aaPredicted RBP7.12□□□□□ -1.27
TMEM39A-210ENST00000490099 GBGT1Q8N5D6 347 aa7.12□□□□□ -1.27
TMEM39A-210ENST00000490099 FAM24BQ8N5W8 94 aa7.12□□□□□ -1.27
TMEM39A-210ENST00000490099 SLC24A4Q8NFF2 622 aa7.12□□□□□ -1.27
TMEM39A-210ENST00000490099 DCANP1Q8TF63 244 aa7.12□□□□□ -1.27
TMEM39A-210ENST00000490099 GATAD1Q8WUU5 269 aa7.12□□□□□ -1.27
TMEM39A-210ENST00000490099 GRAMD2BQ96HH9 432 aa7.12□□□□□ -1.27
TMEM39A-210ENST00000490099 METTL26Q96S19 204 aa7.12□□□□□ -1.27
TMEM39A-210ENST00000490099 MED28Q9H204 178 aa7.12□□□□□ -1.27
TMEM39A-210ENST00000490099 TMEM231Q9H6L2 316 aa7.12□□□□□ -1.27
TMEM39A-210ENST00000490099 HEYLQ9NQ87 328 aaPredicted RBP7.12□□□□□ -1.27
TMEM39A-210ENST00000490099 HSPB7Q9UBY9 170 aa7.12□□□□□ -1.27
TMEM39A-210ENST00000490099 PLECQ15149 4684 aaKnown RBP7.11□□□□□ -1.27
TMEM39A-210ENST00000490099 IGHV3-66A0A0C4DH42 116 aa7.11□□□□□ -1.27
TMEM39A-210ENST00000490099 IFNA21P01568 189 aa7.11□□□□□ -1.27
TMEM39A-210ENST00000490099 P2RY1P47900 373 aa7.11□□□□□ -1.27
TMEM39A-210ENST00000490099 LYZL2Q7Z4W2 148 aa7.11□□□□□ -1.27
TMEM39A-210ENST00000490099 NOXA1Q86UR1 476 aa7.11□□□□□ -1.27
TMEM39A-210ENST00000490099 LRTM2Q8N967 370 aa7.11□□□□□ -1.27
TMEM39A-210ENST00000490099 OR1S2Q8NGQ3 325 aa7.11□□□□□ -1.27
TMEM39A-210ENST00000490099 RNASE11Q8TAA1 199 aaKnown RBP7.11□□□□□ -1.27
TMEM39A-210ENST00000490099 GLMPQ8WWB7 406 aa7.11□□□□□ -1.27
TMEM39A-210ENST00000490099 SSBP4Q9BWG4 385 aaPredicted RBP7.11□□□□□ -1.27
TMEM39A-210ENST00000490099 PRR13Q9NZ81 148 aa7.11□□□□□ -1.27
TMEM39A-210ENST00000490099 U3KQ87 197 aa7.11□□□□□ -1.27
TMEM39A-210ENST00000490099 AGRNO00468 2067 aa7.1□□□□□ -1.27
TMEM39A-210ENST00000490099 hCG_2014768A0A024R1R8 64 aa7.1□□□□□ -1.27
TMEM39A-210ENST00000490099 IGKV3-7A0A075B6H7 116 aa7.1□□□□□ -1.27
TMEM39A-210ENST00000490099 NUPR2A6NF83 97 aa7.1□□□□□ -1.27
TMEM39A-210ENST00000490099 SCGB2A1O75556 95 aa7.1□□□□□ -1.27
TMEM39A-210ENST00000490099 NPY1RP25929 384 aa7.1□□□□□ -1.27
TMEM39A-210ENST00000490099 OR10J1P30954 320 aa7.1□□□□□ -1.27
TMEM39A-210ENST00000490099 BCAP31P51572 246 aa7.1□□□□□ -1.27
TMEM39A-210ENST00000490099 RND2P52198 227 aa7.1□□□□□ -1.27
TMEM39A-210ENST00000490099 DEFB131AP59861 70 aa7.1□□□□□ -1.27
TMEM39A-210ENST00000490099 RRAS2P62070 204 aaPredicted RBP7.1□□□□□ -1.27
TMEM39A-210ENST00000490099 SMCO1Q147U7 214 aa7.1□□□□□ -1.27
TMEM39A-210ENST00000490099 ETFRF1Q6IPR1 90 aa7.1□□□□□ -1.27
TMEM39A-210ENST00000490099 C16orf54Q6UWD8 224 aa7.1□□□□□ -1.27
TMEM39A-210ENST00000490099 TRPT1Q86TN4 253 aaKnown RBP7.1□□□□□ -1.27
TMEM39A-210ENST00000490099 TMEM217Q8N7C4 229 aa7.1□□□□□ -1.27
TMEM39A-210ENST00000490099 Q8WTZ3 238 aa7.1□□□□□ -1.27
TMEM39A-210ENST00000490099 ASB13Q8WXK3 278 aa7.1□□□□□ -1.27
TMEM39A-210ENST00000490099 LINC00476Q8WZB0 136 aa7.1□□□□□ -1.27
TMEM39A-210ENST00000490099 NPIPB3Q92617 1050 aa7.1□□□□□ -1.27
TMEM39A-210ENST00000490099 SEPSECSQ9HD40 501 aaKnown RBP7.1□□□□□ -1.27
TMEM39A-210ENST00000490099 TMED3Q9Y3Q3 217 aa7.1□□□□□ -1.27
TMEM39A-210ENST00000490099 HYDINQ4G0P3 5121 aa7.1□□□□□ -1.27
TMEM39A-210ENST00000490099 CEBPZOSA8MTT3 80 aa7.09□□□□□ -1.27
TMEM39A-210ENST00000490099 DNASE2O00115 360 aaPredicted RBP7.09□□□□□ -1.27
TMEM39A-210ENST00000490099 BUB3O43684 328 aa7.09□□□□□ -1.27
TMEM39A-210ENST00000490099 SLC25A6P12236 298 aa7.09□□□□□ -1.27
TMEM39A-210ENST00000490099 GPX4P36969 197 aaPredicted RBP7.09□□□□□ -1.27
TMEM39A-210ENST00000490099 USF2Q15853 346 aaPredicted RBP7.09□□□□□ -1.27
TMEM39A-210ENST00000490099 LEMD1Q68G75 181 aa7.09□□□□□ -1.27
TMEM39A-210ENST00000490099 CHAC2Q8WUX2 184 aa7.09□□□□□ -1.27
TMEM39A-210ENST00000490099 RARRES2Q99969 163 aa7.09□□□□□ -1.27
TMEM39A-210ENST00000490099 C11orf68Q9H3H3 251 aaKnown RBP7.09□□□□□ -1.27
TMEM39A-210ENST00000490099 IGKV1D-37A0A075B6S9 117 aa7.08□□□□□ -1.28
TMEM39A-210ENST00000490099 CXorf65A6NEN9 183 aa7.08□□□□□ -1.28
TMEM39A-210ENST00000490099 HELTA6NFD8 242 aa7.08□□□□□ -1.28
TMEM39A-210ENST00000490099 GOSR2O14653 212 aa7.08□□□□□ -1.28
TMEM39A-210ENST00000490099 EIF4EBP3O60516 100 aaPredicted RBP7.08□□□□□ -1.28
TMEM39A-210ENST00000490099 TOMM40O96008 361 aa7.08□□□□□ -1.28
TMEM39A-210ENST00000490099 HNRNPCP07910 306 aaKnown RBP eCLIP7.08□□□□□ -1.281e-6■□□□□ 10.1
TMEM39A-210ENST00000490099 RD3LP0DJH9 198 aa7.08□□□□□ -1.28
TMEM39A-210ENST00000490099 AP2S1P53680 142 aaPredicted RBP7.08□□□□□ -1.28
TMEM39A-210ENST00000490099 RPL11P62913 178 aaKnown RBP7.08□□□□□ -1.28
TMEM39A-210ENST00000490099 CYCSP99999 105 aaKnown RBP7.08□□□□□ -1.28
TMEM39A-210ENST00000490099 TMEM41BQ5BJD5 291 aa7.08□□□□□ -1.28
TMEM39A-210ENST00000490099 GSG1LQ6UXU4 331 aa7.08□□□□□ -1.28
TMEM39A-210ENST00000490099 CSNK1G2-AS1Q8NCQ2 148 aa7.08□□□□□ -1.28
TMEM39A-210ENST00000490099 OR11H2Q8NH07 326 aa7.08□□□□□ -1.28
TMEM39A-210ENST00000490099 DTD1Q8TEA8 209 aa7.08□□□□□ -1.28
TMEM39A-210ENST00000490099 RBKSQ9H477 322 aa7.08□□□□□ -1.28
TMEM39A-210ENST00000490099 MGAT4CQ9UBM8 478 aa7.08□□□□□ -1.28
TMEM39A-210ENST00000490099 EPPK1P58107 5090 aaKnown RBP7.08□□□□□ -1.28
TMEM39A-210ENST00000490099 ALMS1Q8TCU4 4167 aa7.07□□□□□ -1.28
TMEM39A-210ENST00000490099 A0A1B0GVG6 124 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms