RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 UBE2BP63146 152 aa2.39□□□□□ -2.03
KDM3A-213ENST00000488971 EIF5AP63241 154 aaKnown RBP2.39□□□□□ -2.03
KDM3A-213ENST00000488971 AMN1Q8IY45 258 aa2.39□□□□□ -2.03
KDM3A-213ENST00000488971 MIR7-3HGQ8N6C7 128 aa2.39□□□□□ -2.03
KDM3A-213ENST00000488971 STAG3L4Q8TBR4 150 aa2.39□□□□□ -2.03
KDM3A-213ENST00000488971 ADAT1Q9BUB4 502 aaKnown RBP2.39□□□□□ -2.03
KDM3A-213ENST00000488971 SNX12Q9UMY4 172 aa2.39□□□□□ -2.03
KDM3A-213ENST00000488971 RNF11Q9Y3C5 154 aa2.39□□□□□ -2.03
KDM3A-213ENST00000488971 PHLDA3Q9Y5J5 127 aa2.39□□□□□ -2.03
KDM3A-213ENST00000488971 PLXNB3Q9ULL4 1909 aa2.38□□□□□ -2.03
KDM3A-213ENST00000488971 TRAV13-1A0A0B4J241 112 aa2.38□□□□□ -2.03
KDM3A-213ENST00000488971 SPAARA0A1B0GVQ0 90 aa2.38□□□□□ -2.03
KDM3A-213ENST00000488971 UBFD1O14562 309 aaKnown RBP2.38□□□□□ -2.03
KDM3A-213ENST00000488971 CCL25O15444 150 aa2.38□□□□□ -2.03
KDM3A-213ENST00000488971 SYNJ1O43426 1573 aa2.38□□□□□ -2.03
KDM3A-213ENST00000488971 CXCL1P09341 107 aa2.38□□□□□ -2.03
KDM3A-213ENST00000488971 PTHLHP12272 177 aa2.38□□□□□ -2.03
KDM3A-213ENST00000488971 RPL22P35268 128 aaKnown RBP2.38□□□□□ -2.03
KDM3A-213ENST00000488971 FER1L6Q2WGJ9 1857 aa2.38□□□□□ -2.03
KDM3A-213ENST00000488971 HSD17B12Q53GQ0 312 aa2.38□□□□□ -2.03
KDM3A-213ENST00000488971 COL5A1-AS1Q5SY13 56 aa2.38□□□□□ -2.03
KDM3A-213ENST00000488971 LCN15Q6UWW0 184 aa2.38□□□□□ -2.03
KDM3A-213ENST00000488971 ANKRD31Q8N7Z5 1873 aa2.38□□□□□ -2.03
KDM3A-213ENST00000488971 TMEM105Q8N8V8 129 aa2.38□□□□□ -2.03
KDM3A-213ENST00000488971 OR5D14Q8NGL3 314 aa2.38□□□□□ -2.03
KDM3A-213ENST00000488971 OR8D4Q8NGM9 314 aa2.38□□□□□ -2.03
KDM3A-213ENST00000488971 NUP205Q92621 2012 aa2.38□□□□□ -2.03
KDM3A-213ENST00000488971 YPEL2Q96QA6 119 aa2.38□□□□□ -2.03
KDM3A-213ENST00000488971 CDK5RAP2Q96SN8 1893 aa2.38□□□□□ -2.03
KDM3A-213ENST00000488971 MRPL57Q9BQC6 102 aaKnown RBP2.38□□□□□ -2.03
KDM3A-213ENST00000488971 NAA38Q9BRA0 125 aaKnown RBP2.38□□□□□ -2.03
KDM3A-213ENST00000488971 SCAPERQ9BY12 1400 aa2.38□□□□□ -2.03
KDM3A-213ENST00000488971 RERGLQ9H628 205 aa2.38□□□□□ -2.03
KDM3A-213ENST00000488971 LINC00574Q9H8X3 128 aa2.38□□□□□ -2.03
KDM3A-213ENST00000488971 CCDC167Q9P0B6 97 aa2.38□□□□□ -2.03
KDM3A-213ENST00000488971 KLK5Q9Y337 293 aaPredicted RBP2.38□□□□□ -2.03
KDM3A-213ENST00000488971 S4R3C0 116 aa2.38□□□□□ -2.03
KDM3A-213ENST00000488971 PLXND1Q9Y4D7 1925 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 IGKV2D-24A0A075B6R9 120 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 TRAV27A0A087WT01 109 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 A0A087X0T9 212 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 IGHV3-21A0A0B4J1V1 117 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 FAM236AA0A1B0GUQ0 79 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 FAM236BA0A1B0GV22 79 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 C7orf66A4D0T2 115 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 OR2T8A6NH00 312 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 A8MWV9 139 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 LEUTXA8MZ59 168 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 H3BMG7 143 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 NDUFB3O43676 98 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 IGHV1-46P01743 117 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 IL4P05112 153 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 OR5AC1P0C628 307 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 HIST1H1BP16401 226 aaKnown RBP2.37□□□□□ -2.03
KDM3A-213ENST00000488971 CRYGSP22914 178 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 NPPCP23582 126 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 CRYBB3P26998 211 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 PSMB8P28062 276 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 TGFBR1P36897 503 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 MPV17P39210 176 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 RPL27AP46776 148 aaKnown RBP2.37□□□□□ -2.03
KDM3A-213ENST00000488971 DYNLT3P51808 116 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 ARPP19P56211 112 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 HIST1H4AP62805 103 aaKnown RBP2.37□□□□□ -2.03
KDM3A-213ENST00000488971 HBBP68871 147 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 MYL5Q02045 173 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 MEF2BQ02080 365 aaPredicted RBP2.37□□□□□ -2.03
KDM3A-213ENST00000488971 PLGLB1Q02325 96 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 EBI3Q14213 229 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 LGALS9BQ3B8N2 356 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 MRPL51Q4U2R6 128 aaKnown RBP2.37□□□□□ -2.03
KDM3A-213ENST00000488971 LINC01554Q52M75 96 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 MEIG1Q5JSS6 88 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 SPANXN3Q5MJ09 141 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 LGALS9CQ6DKI2 356 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 ZNF880Q6PDB4 577 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 ZNF767PQ75MW2 155 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 C3orf22Q8N5N4 141 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 ST20-AS1Q8NBB2 130 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 OR10AC1Q8NH08 325 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 OR4C12Q96R67 309 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 GABARAPL1Q9H0R8 117 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 TMEM133Q9H2Q1 129 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 Q9H521 79 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 FAM60AQ9NP50 221 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 PZPP20742 1482 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 MYOM2P54296 1465 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 PLA2R1Q13018 1463 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 PIK3C2AO00443 1686 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 CUL7Q14999 1698 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 ZFYVE16Q7Z3T8 1539 aa2.37□□□□□ -2.03
KDM3A-213ENST00000488971 DENND4CQ5VZ89 1909 aa2.36□□□□□ -2.03
KDM3A-213ENST00000488971 TICRRQ7Z2Z1 1910 aa2.36□□□□□ -2.03
KDM3A-213ENST00000488971 KDM6AO15550 1401 aaPredicted RBP2.36□□□□□ -2.03
KDM3A-213ENST00000488971 KIAA1107Q9UPP5 1409 aa2.36□□□□□ -2.03
KDM3A-213ENST00000488971 ECM29Q5VYK3 1845 aa2.36□□□□□ -2.03
KDM3A-213ENST00000488971 ATAD5Q96QE3 1844 aa2.36□□□□□ -2.03
KDM3A-213ENST00000488971 IGLV4-60A0A075B6I1 120 aa2.36□□□□□ -2.03
KDM3A-213ENST00000488971 IGKV1-9A0A0C4DH69 117 aa2.36□□□□□ -2.03
KDM3A-213ENST00000488971 A0A0D9SEW6 157 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms