RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 OR8D4Q8NGM9 314 aa2.29□□□□□ -2.04
FN1-222ENST00000485567 PP6455Q8WZ26 134 aa2.29□□□□□ -2.04
FN1-222ENST00000485567 OR4C12Q96R67 309 aa2.29□□□□□ -2.04
FN1-222ENST00000485567 SNHG12Q9BXW3 62 aa2.29□□□□□ -2.04
FN1-222ENST00000485567 MRPL32Q9BYC8 188 aaKnown RBP2.29□□□□□ -2.04
FN1-222ENST00000485567 TTTY13Q9BZ97 58 aa2.29□□□□□ -2.04
FN1-222ENST00000485567 TCEAL2Q9H3H9 227 aaPredicted RBP2.29□□□□□ -2.04
FN1-222ENST00000485567 BANF2Q9H503 90 aa2.29□□□□□ -2.04
FN1-222ENST00000485567 LINC00574Q9H8X3 128 aa2.29□□□□□ -2.04
FN1-222ENST00000485567 KLK5Q9Y337 293 aaPredicted RBP2.29□□□□□ -2.04
FN1-222ENST00000485567 SOX21Q9Y651 276 aaPredicted RBP2.29□□□□□ -2.04
FN1-222ENST00000485567 DOCK6Q96HP0 2047 aa2.29□□□□□ -2.04
FN1-222ENST00000485567 PHLPP1O60346 1717 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 CEP170Q5SW79 1584 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 RAPGEF2Q9Y4G8 1499 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 DSPPQ9NZW4 1301 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 IGHV3-21A0A0B4J1V1 117 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 TRAV13-1A0A0B4J241 112 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 A6NED7 52 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 ZNF727A8MUV8 499 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 A8MWP4 228 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 LEUTXA8MZ59 168 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 C16orf90A8MZG2 172 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 H3BMG7 143 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 M0R129 80 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 LEPROTO15243 131 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 CST7O76096 145 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 IGKV1D-33P01593 117 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 IGKV1-33P01594 117 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 IGHV1-46P01743 117 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 C1QAP02745 245 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 TRGV3P03979 118 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 APODP05090 189 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 CCL3P10147 92 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 CRHBPP24387 322 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 HLA-DMBP28068 263 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 RPL22P35268 128 aaKnown RBP2.28□□□□□ -2.04
FN1-222ENST00000485567 EIF2B2P49770 351 aaKnown RBP2.28□□□□□ -2.04
FN1-222ENST00000485567 HBBP68871 147 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 KRTAP13-3Q3SY46 172 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 KRTAP13-2Q52LG2 175 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 MEIG1Q5JSS6 88 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 C16orf47Q6ZP98 133 aaPredicted RBP2.28□□□□□ -2.04
FN1-222ENST00000485567 ZNF767PQ75MW2 155 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 BPIFA4PQ86YQ2 179 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 C4orf33Q8N1A6 199 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 WFDC11Q8NEX6 87 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 OR5D14Q8NGL3 314 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 MRPL57Q9BQC6 102 aaKnown RBP2.28□□□□□ -2.04
FN1-222ENST00000485567 GABARAPL1Q9H0R8 117 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 LINC00588Q9Y4M8 146 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 DOCK9Q9BZ29 2069 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 PLXNB3Q9ULL4 1909 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 KIF13BQ9NQT8 1826 aa2.28□□□□□ -2.04
FN1-222ENST00000485567 ZNF106Q9H2Y7 1883 aaKnown RBP2.27□□□□□ -2.05
FN1-222ENST00000485567 IFITM5A6NNB3 132 aa2.27□□□□□ -2.05
FN1-222ENST00000485567 K7ERS5 55 aa2.27□□□□□ -2.05
FN1-222ENST00000485567 TCRAP04437 139 aa2.27□□□□□ -2.05
FN1-222ENST00000485567 NPPCP23582 126 aa2.27□□□□□ -2.05
FN1-222ENST00000485567 KRTAP5-9P26371 169 aa2.27□□□□□ -2.05
FN1-222ENST00000485567 S100A4P26447 101 aaKnown RBP2.27□□□□□ -2.05
FN1-222ENST00000485567 ATP6V0CP27449 155 aa2.27□□□□□ -2.05
FN1-222ENST00000485567 RNASE4P34096 147 aaKnown RBP2.27□□□□□ -2.05
FN1-222ENST00000485567 SRP14P37108 136 aaKnown RBP2.27□□□□□ -2.05
FN1-222ENST00000485567 GUCA1AP43080 201 aaPredicted RBP2.27□□□□□ -2.05
FN1-222ENST00000485567 GNG4P50150 75 aa2.27□□□□□ -2.05
FN1-222ENST00000485567 DYNLT3P51808 116 aa2.27□□□□□ -2.05
FN1-222ENST00000485567 NDUFA6P56556 154 aa2.27□□□□□ -2.05
FN1-222ENST00000485567 UBE2BP63146 152 aa2.27□□□□□ -2.05
FN1-222ENST00000485567 EIF5AP63241 154 aaKnown RBP2.27□□□□□ -2.05
FN1-222ENST00000485567 CDK6Q00534 326 aa2.27□□□□□ -2.05
FN1-222ENST00000485567 MEF2BQ02080 365 aaPredicted RBP2.27□□□□□ -2.05
FN1-222ENST00000485567 HSD17B12Q53GQ0 312 aa2.27□□□□□ -2.05
FN1-222ENST00000485567 PHF5AQ7RTV0 110 aaKnown RBP2.27□□□□□ -2.05
FN1-222ENST00000485567 MMGT1Q8N4V1 131 aa2.27□□□□□ -2.05
FN1-222ENST00000485567 NAT14Q8WUY8 206 aa2.27□□□□□ -2.05
FN1-222ENST00000485567 RBPMSQ93062 196 aaKnown RBP2.27□□□□□ -2.05
FN1-222ENST00000485567 MAGOHBQ96A72 148 aaKnown RBP2.27□□□□□ -2.05
FN1-222ENST00000485567 C11orf1Q9H5F2 150 aa2.27□□□□□ -2.05
FN1-222ENST00000485567 SLC39A9Q9NUM3 307 aa2.27□□□□□ -2.05
FN1-222ENST00000485567 SNX12Q9UMY4 172 aa2.27□□□□□ -2.05
FN1-222ENST00000485567 CAMSAP2Q08AD1 1489 aa2.26□□□□□ -2.05
FN1-222ENST00000485567 GRIN2AQ12879 1464 aa2.26□□□□□ -2.05
FN1-222ENST00000485567 TRAPPC8Q9Y2L5 1435 aa2.26□□□□□ -2.05
FN1-222ENST00000485567 TMEM2Q9UHN6 1383 aa2.26□□□□□ -2.05
FN1-222ENST00000485567 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.26□□□□□ -2.05
FN1-222ENST00000485567 TRAV27A0A087WT01 109 aa2.26□□□□□ -2.05
FN1-222ENST00000485567 A0A1B0GW54 56 aa2.26□□□□□ -2.05
FN1-222ENST00000485567 MEIS3P1A6NDR6 274 aa2.26□□□□□ -2.05
FN1-222ENST00000485567 BBIP1A8MTZ0 92 aa2.26□□□□□ -2.05
FN1-222ENST00000485567 NCR2O95944 276 aa2.26□□□□□ -2.05
FN1-222ENST00000485567 HRASP01112 189 aa2.26□□□□□ -2.05
FN1-222ENST00000485567 KRASP01116 189 aa2.26□□□□□ -2.05
FN1-222ENST00000485567 SLC25A5P05141 298 aaKnown RBP2.26□□□□□ -2.05
FN1-222ENST00000485567 CCL5P13501 91 aa2.26□□□□□ -2.05
FN1-222ENST00000485567 HIST1H1BP16401 226 aaKnown RBP2.26□□□□□ -2.05
FN1-222ENST00000485567 CRYGSP22914 178 aa2.26□□□□□ -2.05
FN1-222ENST00000485567 AQP4P55087 323 aa2.26□□□□□ -2.05
FN1-222ENST00000485567 PLGLB1Q02325 96 aa2.26□□□□□ -2.05
FN1-222ENST00000485567 RPL18Q07020 188 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms