RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 ABCA1O95477 2261 aa10.98□□□□□ -0.65
CLK3-204ENST00000483723 PDE6DO43924 150 aa10.98□□□□□ -0.65
CLK3-204ENST00000483723 RD3LP0DJH9 198 aa10.98□□□□□ -0.65
CLK3-204ENST00000483723 ORM2P19652 201 aa10.98□□□□□ -0.65
CLK3-204ENST00000483723 ATP5G3P48201 142 aa10.98□□□□□ -0.65
CLK3-204ENST00000483723 UBE2G2P60604 165 aa10.98□□□□□ -0.65
CLK3-204ENST00000483723 FAM74A3Q4VXF1 159 aa10.98□□□□□ -0.65
CLK3-204ENST00000483723 AWAT1Q58HT5 328 aa10.98□□□□□ -0.65
CLK3-204ENST00000483723 LINC00305Q7Z4B0 112 aa10.98□□□□□ -0.65
CLK3-204ENST00000483723 OR51G1Q8NGK1 321 aa10.98□□□□□ -0.65
CLK3-204ENST00000483723 YTHDF2Q9Y5A9 579 aaKnown RBP10.98□□□□□ -0.65
CLK3-204ENST00000483723 PUS1Q9Y606 427 aaKnown RBP eCLIP10.98□□□□□ -0.65
CLK3-204ENST00000483723 APCP25054 2843 aa10.97□□□□□ -0.65
CLK3-204ENST00000483723 TRAV41A0A0B4J266 112 aa10.97□□□□□ -0.65
CLK3-204ENST00000483723 WI2-2373I1.2A0A1W2PRP0 233 aa10.97□□□□□ -0.65
CLK3-204ENST00000483723 C7orf77A4D0Y5 90 aa10.97□□□□□ -0.65
CLK3-204ENST00000483723 F6UZH7 168 aa10.97□□□□□ -0.65
CLK3-204ENST00000483723 GNG7O60262 68 aa10.97□□□□□ -0.65
CLK3-204ENST00000483723 CEBPGP53567 150 aa10.97□□□□□ -0.65
CLK3-204ENST00000483723 RHEBQ15382 184 aa10.97□□□□□ -0.65
CLK3-204ENST00000483723 CST9LP1Q5W188 147 aa10.97□□□□□ -0.65
CLK3-204ENST00000483723 ZNF491Q8N8L2 437 aa10.97□□□□□ -0.65
CLK3-204ENST00000483723 STXBP6Q8NFX7 210 aa10.97□□□□□ -0.65
CLK3-204ENST00000483723 OR5AU1Q8NGC0 362 aa10.97□□□□□ -0.65
CLK3-204ENST00000483723 OR1B1Q8NGR6 318 aa10.97□□□□□ -0.65
CLK3-204ENST00000483723 TVP23CQ96ET8 276 aa10.97□□□□□ -0.65
CLK3-204ENST00000483723 UHRF2Q96PU4 802 aa10.97□□□□□ -0.65
CLK3-204ENST00000483723 NIPSNAP3BQ9BS92 247 aa10.97□□□□□ -0.65
CLK3-204ENST00000483723 ZNF580Q9UK33 172 aa10.97□□□□□ -0.65
CLK3-204ENST00000483723 POLQO75417 2590 aa10.97□□□□□ -0.65
CLK3-204ENST00000483723 OR7C2O60412 319 aa10.96□□□□□ -0.65
CLK3-204ENST00000483723 BLCAPP62952 87 aa10.96□□□□□ -0.65
CLK3-204ENST00000483723 Q6YL49 198 aa10.96□□□□□ -0.65
CLK3-204ENST00000483723 CIARTQ8N365 385 aaPredicted RBP10.96□□□□□ -0.65
CLK3-204ENST00000483723 NECAP1Q8NC96 275 aa10.96□□□□□ -0.65
CLK3-204ENST00000483723 OR5R1Q8NH85 324 aa10.96□□□□□ -0.65
CLK3-204ENST00000483723 ZNF502Q8TBZ5 544 aa10.96□□□□□ -0.65
CLK3-204ENST00000483723 OR51M1Q9H341 326 aa10.96□□□□□ -0.65
CLK3-204ENST00000483723 SDF2L1Q9HCN8 221 aa10.96□□□□□ -0.65
CLK3-204ENST00000483723 S4R3C0 116 aa10.96□□□□□ -0.65
CLK3-204ENST00000483723 A0A1W2PRE2 83 aa10.95□□□□□ -0.66
CLK3-204ENST00000483723 ZNF727A8MUV8 499 aa10.95□□□□□ -0.66
CLK3-204ENST00000483723 OR2C1O95371 312 aa10.95□□□□□ -0.66
CLK3-204ENST00000483723 IGHV4-59P01825 116 aa10.95□□□□□ -0.66
CLK3-204ENST00000483723 CTSGP08311 255 aa10.95□□□□□ -0.66
CLK3-204ENST00000483723 PPIFP30405 207 aaKnown RBP10.95□□□□□ -0.66
CLK3-204ENST00000483723 RHOGP84095 191 aa10.95□□□□□ -0.66
CLK3-204ENST00000483723 PNRC1Q12796 327 aaPredicted RBP10.95□□□□□ -0.66
CLK3-204ENST00000483723 ZNF343Q6P1L6 599 aa10.95□□□□□ -0.66
CLK3-204ENST00000483723 FXYD5Q96DB9 178 aa10.95□□□□□ -0.66
CLK3-204ENST00000483723 ATP6V0BQ99437 205 aa10.95□□□□□ -0.66
CLK3-204ENST00000483723 PAXXQ9BUH6 204 aa10.95□□□□□ -0.66
CLK3-204ENST00000483723 PARLQ9H300 379 aa10.95□□□□□ -0.66
CLK3-204ENST00000483723 HIGD1AQ9Y241 93 aa10.95□□□□□ -0.66
CLK3-204ENST00000483723 NBPF19A0A087WUL8 3843 aa10.95□□□□□ -0.66
CLK3-204ENST00000483723 M0R036 132 aa10.95□□□□□ -0.66
CLK3-204ENST00000483723 C15orf32Q32M92 178 aa10.95□□□□□ -0.66
CLK3-204ENST00000483723 Q56UQ5 140 aa10.95□□□□□ -0.66
CLK3-204ENST00000483723 C11orf52Q96A22 123 aa10.95□□□□□ -0.66
CLK3-204ENST00000483723 ZNF414Q96IQ9 312 aa10.95□□□□□ -0.66
CLK3-204ENST00000483723 C20orf24Q9BUV8 137 aa10.95□□□□□ -0.66
CLK3-204ENST00000483723 TUBA4BQ9H853 241 aa10.95□□□□□ -0.66
CLK3-204ENST00000483723 H3BUA1 57 aa10.94□□□□□ -0.66
CLK3-204ENST00000483723 ADMP35318 185 aa10.94□□□□□ -0.66
CLK3-204ENST00000483723 LYZP61626 148 aa10.94□□□□□ -0.66
CLK3-204ENST00000483723 TMEM241Q24JQ0 296 aa10.94□□□□□ -0.66
CLK3-204ENST00000483723 C9orf152Q5JTZ5 239 aa10.94□□□□□ -0.66
CLK3-204ENST00000483723 Q6ZS46 218 aa10.94□□□□□ -0.66
CLK3-204ENST00000483723 Q8WTZ3 238 aa10.94□□□□□ -0.66
CLK3-204ENST00000483723 SMIM7Q9BQ49 75 aa10.94□□□□□ -0.66
CLK3-204ENST00000483723 SLC25A39Q9BZJ4 359 aaPredicted RBP10.94□□□□□ -0.66
CLK3-204ENST00000483723 RPS10P5Q9NQ39 176 aa10.94□□□□□ -0.66
CLK3-204ENST00000483723 GAR1Q9NY12 217 aaKnown RBP10.94□□□□□ -0.66
CLK3-204ENST00000483723 NAT8Q9UHE5 227 aa10.94□□□□□ -0.66
CLK3-204ENST00000483723 VPS13CQ709C8 3753 aa10.93□□□□□ -0.66
CLK3-204ENST00000483723 A0A087WWC5 75 aa10.93□□□□□ -0.66
CLK3-204ENST00000483723 B4DEV8 164 aa10.93□□□□□ -0.66
CLK3-204ENST00000483723 OR10J4P0C629 311 aa10.93□□□□□ -0.66
CLK3-204ENST00000483723 KIAA0141Q14154 515 aaPredicted RBP10.93□□□□□ -0.66
CLK3-204ENST00000483723 TMEM88Q6PEY1 159 aa10.93□□□□□ -0.66
CLK3-204ENST00000483723 ABCA12Q86UK0 2595 aa10.93□□□□□ -0.66
CLK3-204ENST00000483723 TEX29Q8N6K0 151 aa10.93□□□□□ -0.66
CLK3-204ENST00000483723 RPUSD4Q96CM3 377 aaKnown RBP10.93□□□□□ -0.66
CLK3-204ENST00000483723 RNF125Q96EQ8 232 aa10.93□□□□□ -0.66
CLK3-204ENST00000483723 SMCO4Q9NRQ5 59 aa10.93□□□□□ -0.66
CLK3-204ENST00000483723 TMEM14CQ9P0S9 112 aa10.93□□□□□ -0.66
CLK3-204ENST00000483723 TRBV7-1A0A0A6YYK4 115 aa10.92□□□□□ -0.66
CLK3-204ENST00000483723 FAM223BA6NKX1 122 aa10.92□□□□□ -0.66
CLK3-204ENST00000483723 H3BRN7 92 aa10.92□□□□□ -0.66
CLK3-204ENST00000483723 AP4M1O00189 453 aa10.92□□□□□ -0.66
CLK3-204ENST00000483723 NUPL2O15504 423 aaKnown RBP10.92□□□□□ -0.66
CLK3-204ENST00000483723 SCGB2A1O75556 95 aa10.92□□□□□ -0.66
CLK3-204ENST00000483723 NDUFB4O95168 129 aa10.92□□□□□ -0.66
CLK3-204ENST00000483723 IGHV3-23P01764 117 aa10.92□□□□□ -0.66
CLK3-204ENST00000483723 PYYP10082 97 aa10.92□□□□□ -0.66
CLK3-204ENST00000483723 UBE2L3P68036 154 aaKnown RBP10.92□□□□□ -0.66
CLK3-204ENST00000483723 CBLN2Q8IUK8 224 aa10.92□□□□□ -0.66
CLK3-204ENST00000483723 FAM223AQ8IWN6 122 aa10.92□□□□□ -0.66
CLK3-204ENST00000483723 SHANK2-AS3Q9BTD1 123 aa10.92□□□□□ -0.66
CLK3-204ENST00000483723 CHRDL1Q9BU40 450 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 289 ms