RNA–Protein interactions for RNA: ENST00000477949.1

USP33-208, Transcript of ubiquitin specific peptidase 33, human

TSL 2

Gene USP33, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP33-208	ENST00000477949	WBP4	O75554	376 aa	Known RBP	4.25	□□□□□ -1.73
USP33-208	ENST00000477949	NXPH4	O95158	308 aa		4.25	□□□□□ -1.73
USP33-208	ENST00000477949	HPRT1	P00492	218 aa		4.25	□□□□□ -1.73
USP33-208	ENST00000477949	IGKV1-17	P01599	117 aa		4.25	□□□□□ -1.73
USP33-208	ENST00000477949	MAPK3	P27361	379 aa	Predicted RBP	4.25	□□□□□ -1.73
USP33-208	ENST00000477949	RANBP1	P43487	201 aa		4.25	□□□□□ -1.73
USP33-208	ENST00000477949	PAX9	P55771	341 aa		4.25	□□□□□ -1.73
USP33-208	ENST00000477949	SNRPD3	P62318	126 aa	Known RBP	4.25	□□□□□ -1.73
USP33-208	ENST00000477949	PSG9	Q00887	426 aa		4.25	□□□□□ -1.73
USP33-208	ENST00000477949	P2RY14	Q15391	338 aa		4.25	□□□□□ -1.73
USP33-208	ENST00000477949	MSMO1	Q15800	293 aa		4.25	□□□□□ -1.73
USP33-208	ENST00000477949	ANXA2R	Q3ZCQ2	193 aa		4.25	□□□□□ -1.73
USP33-208	ENST00000477949	CADM3	Q8N126	398 aa		4.25	□□□□□ -1.73
USP33-208	ENST00000477949	MS4A15	Q8N5U1	240 aa		4.25	□□□□□ -1.73
USP33-208	ENST00000477949		Q8N814	137 aa		4.25	□□□□□ -1.73
USP33-208	ENST00000477949	PRR26	Q8N8Z3	221 aa		4.25	□□□□□ -1.73
USP33-208	ENST00000477949	CCDC197	Q8NCU1	140 aa		4.25	□□□□□ -1.73
USP33-208	ENST00000477949	OR56B1	Q8NGI3	324 aa		4.25	□□□□□ -1.73
USP33-208	ENST00000477949	SLC25A32	Q9H2D1	315 aa		4.25	□□□□□ -1.73
USP33-208	ENST00000477949	FAM212B	Q9NTI7	297 aa	Predicted RBP	4.25	□□□□□ -1.73
USP33-208	ENST00000477949	ELF5	Q9UKW6	265 aa	Predicted RBP	4.25	□□□□□ -1.73
USP33-208	ENST00000477949	NSG2	Q9Y328	171 aa		4.25	□□□□□ -1.73
USP33-208	ENST00000477949		F6UB75	175 aa		4.24	□□□□□ -1.73
USP33-208	ENST00000477949	SLC17A2	O00624	439 aa		4.24	□□□□□ -1.73
USP33-208	ENST00000477949	RS1	O15537	224 aa		4.24	□□□□□ -1.73
USP33-208	ENST00000477949	HIST1H1D	P16402	221 aa	Known RBP	4.24	□□□□□ -1.73
USP33-208	ENST00000477949	ELK1	P19419	428 aa		4.24	□□□□□ -1.73
USP33-208	ENST00000477949	NPBWR1	P48145	328 aa		4.24	□□□□□ -1.73
USP33-208	ENST00000477949	RORC	P51449	518 aa		4.24	□□□□□ -1.73
USP33-208	ENST00000477949	IZUMO4	Q1ZYL8	232 aa		4.24	□□□□□ -1.73
USP33-208	ENST00000477949	OR13F1	Q8NGS4	319 aa		4.24	□□□□□ -1.73
USP33-208	ENST00000477949	RAB3C	Q96E17	227 aa		4.24	□□□□□ -1.73
USP33-208	ENST00000477949	TMEM80	Q96HE8	168 aa		4.24	□□□□□ -1.73
USP33-208	ENST00000477949	VSIG2	Q96IQ7	327 aa		4.24	□□□□□ -1.73
USP33-208	ENST00000477949	C7orf50	Q9BRJ6	194 aa	Known RBP	4.24	□□□□□ -1.73
USP33-208	ENST00000477949	HINT2	Q9BX68	163 aa		4.24	□□□□□ -1.73
USP33-208	ENST00000477949	WDR12	Q9GZL7	423 aa	Known RBP	4.24	□□□□□ -1.73
USP33-208	ENST00000477949	PLEKHA2	Q9HB19	425 aa		4.24	□□□□□ -1.73
USP33-208	ENST00000477949	SCPEP1	Q9HB40	452 aa		4.24	□□□□□ -1.73
USP33-208	ENST00000477949	CCL28	Q9NRJ3	127 aa		4.24	□□□□□ -1.73
USP33-208	ENST00000477949	COMMD9	Q9P000	198 aa		4.24	□□□□□ -1.73
USP33-208	ENST00000477949	OR51B2	Q9Y5P1	312 aa		4.24	□□□□□ -1.73
USP33-208	ENST00000477949		A0A0J9YX75	114 aa		4.23	□□□□□ -1.73
USP33-208	ENST00000477949		A0A1B0GUV1	79 aa		4.23	□□□□□ -1.73
USP33-208	ENST00000477949	GAGE12J	A6NER3	117 aa		4.23	□□□□□ -1.73
USP33-208	ENST00000477949	EFCAB10	A6NFE3	127 aa		4.23	□□□□□ -1.73
USP33-208	ENST00000477949	RHOD	O00212	210 aa		4.23	□□□□□ -1.73
USP33-208	ENST00000477949	SULT1C2	O00338	296 aa		4.23	□□□□□ -1.73
USP33-208	ENST00000477949	EI24	O14681	340 aa		4.23	□□□□□ -1.73
USP33-208	ENST00000477949	BUB3	O43684	328 aa		4.23	□□□□□ -1.73
USP33-208	ENST00000477949	MYL12A	P19105	171 aa		4.23	□□□□□ -1.73
USP33-208	ENST00000477949	DTYMK	P23919	212 aa		4.23	□□□□□ -1.73
USP33-208	ENST00000477949	OR5I1	Q13606	314 aa		4.23	□□□□□ -1.73
USP33-208	ENST00000477949	FAM78B	Q5VT40	261 aa		4.23	□□□□□ -1.73
USP33-208	ENST00000477949	OR4B1	Q8NGF8	309 aa		4.23	□□□□□ -1.73
USP33-208	ENST00000477949	MOB3A	Q96BX8	217 aa		4.23	□□□□□ -1.73
USP33-208	ENST00000477949	URB1-AS1	Q96HZ7	61 aa		4.23	□□□□□ -1.73
USP33-208	ENST00000477949	CLN5	O75503	358 aa		4.22	□□□□□ -1.73
USP33-208	ENST00000477949	UCHL1	P09936	223 aa		4.22	□□□□□ -1.73
USP33-208	ENST00000477949	CTXN2	P0C2S0	81 aa		4.22	□□□□□ -1.73
USP33-208	ENST00000477949	EIF2B2	P49770	351 aa	Known RBP	4.22	□□□□□ -1.73
USP33-208	ENST00000477949	AP2S1	P53680	142 aa	Predicted RBP	4.22	□□□□□ -1.73
USP33-208	ENST00000477949	CLDN12	P56749	244 aa		4.22	□□□□□ -1.73
USP33-208	ENST00000477949	MRPS15	P82914	257 aa	Known RBP	4.22	□□□□□ -1.73
USP33-208	ENST00000477949	WFDC2	Q14508	124 aa		4.22	□□□□□ -1.73
USP33-208	ENST00000477949	C2orf76	Q3KRA6	126 aa		4.22	□□□□□ -1.73
USP33-208	ENST00000477949	SPATA31B1P	Q5VZV4	182 aa		4.22	□□□□□ -1.73
USP33-208	ENST00000477949	DMBX1	Q8NFW5	382 aa		4.22	□□□□□ -1.73
USP33-208	ENST00000477949	OR10R2	Q8NGX6	335 aa		4.22	□□□□□ -1.73
USP33-208	ENST00000477949	RNASE8	Q8TDE3	154 aa	Known RBP	4.22	□□□□□ -1.73
USP33-208	ENST00000477949	PINX1	Q96BK5	328 aa	Known RBP	4.22	□□□□□ -1.73
USP33-208	ENST00000477949	GPR146	Q96CH1	333 aa		4.22	□□□□□ -1.73
USP33-208	ENST00000477949	TMEM56	Q96MV1	263 aa		4.22	□□□□□ -1.73
USP33-208	ENST00000477949	ABHD1	Q96SE0	405 aa		4.22	□□□□□ -1.73
USP33-208	ENST00000477949	LINC00467	Q9BRT7	94 aa		4.22	□□□□□ -1.73
USP33-208	ENST00000477949	C9orf16	Q9BUW7	83 aa		4.22	□□□□□ -1.73
USP33-208	ENST00000477949	CHAC1	Q9BUX1	264 aa		4.22	□□□□□ -1.73
USP33-208	ENST00000477949		M0R2Z0	102 aa		4.21	□□□□□ -1.74
USP33-208	ENST00000477949	ATP5H	O75947	161 aa		4.21	□□□□□ -1.74
USP33-208	ENST00000477949	SCGB1D2	O95969	90 aa		4.21	□□□□□ -1.74
USP33-208	ENST00000477949	IGLV2-8	P01709	118 aa		4.21	□□□□□ -1.74
USP33-208	ENST00000477949	PSMB3	P49720	205 aa		4.21	□□□□□ -1.74
USP33-208	ENST00000477949	WNT4	P56705	351 aa		4.21	□□□□□ -1.74
USP33-208	ENST00000477949	ST3GAL4	Q11206	333 aa		4.21	□□□□□ -1.74
USP33-208	ENST00000477949	TIGIT	Q495A1	244 aa		4.21	□□□□□ -1.74
USP33-208	ENST00000477949	C1orf146	Q5VVC0	180 aa		4.21	□□□□□ -1.74
USP33-208	ENST00000477949	ZFP1	Q6P2D0	407 aa		4.21	□□□□□ -1.74
USP33-208	ENST00000477949	CNIH2	Q6PI25	160 aa		4.21	□□□□□ -1.74
USP33-208	ENST00000477949	SIGLEC15	Q6ZMC9	328 aa		4.21	□□□□□ -1.74
USP33-208	ENST00000477949	TMED4	Q7Z7H5	227 aa		4.21	□□□□□ -1.74
USP33-208	ENST00000477949	BAP18	Q8IXM2	172 aa		4.21	□□□□□ -1.74
USP33-208	ENST00000477949	CIRBP-AS1	Q8TBR5	109 aa		4.21	□□□□□ -1.74
USP33-208	ENST00000477949	FAM3D	Q96BQ1	224 aa		4.21	□□□□□ -1.74
USP33-208	ENST00000477949	TMEM208	Q9BTX3	173 aa		4.21	□□□□□ -1.74
USP33-208	ENST00000477949	NOP10	Q9NPE3	64 aa	Known RBP	4.21	□□□□□ -1.74
USP33-208	ENST00000477949	PLCXD1	Q9NUJ7	323 aa		4.21	□□□□□ -1.74
USP33-208	ENST00000477949	PRND	Q9UKY0	176 aa		4.21	□□□□□ -1.74
USP33-208	ENST00000477949	RAB22A	Q9UL26	194 aa		4.21	□□□□□ -1.74
USP33-208	ENST00000477949	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	4.21	□□□□□ -1.74
USP33-208	ENST00000477949	LPA	P08519	4548 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms