RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 MOSP00540 346 aa9.66□□□□□ -0.86
U2AF1-209ENST00000475639 CTRLP40313 264 aa9.66□□□□□ -0.86
U2AF1-209ENST00000475639 PIMREGQ9BSJ6 248 aa9.66□□□□□ -0.86
U2AF1-209ENST00000475639 ERG28Q9UKR5 140 aa9.66□□□□□ -0.86
U2AF1-209ENST00000475639 RNF114Q9Y508 228 aa9.66□□□□□ -0.86
U2AF1-209ENST00000475639 IGHV3-49A0A0A0MS15 119 aa9.65□□□□□ -0.86
U2AF1-209ENST00000475639 IGHV2-70DA0A0C4DH43 119 aa9.65□□□□□ -0.86
U2AF1-209ENST00000475639 TMEM42Q69YG0 159 aa9.65□□□□□ -0.86
U2AF1-209ENST00000475639 TTC28Q96AY4 2481 aa9.65□□□□□ -0.86
U2AF1-209ENST00000475639 LINC01565O15544 149 aa9.65□□□□□ -0.86
U2AF1-209ENST00000475639 CISD3P0C7P0 127 aa9.65□□□□□ -0.86
U2AF1-209ENST00000475639 TEX45Q8NA69 505 aa9.65□□□□□ -0.86
U2AF1-209ENST00000475639 OSR1Q8TAX0 266 aaPredicted RBP9.65□□□□□ -0.86
U2AF1-209ENST00000475639 C21orf62Q9NYP8 219 aa9.65□□□□□ -0.86
U2AF1-209ENST00000475639 FABP5P3A8MUU1 101 aa9.65□□□□□ -0.86
U2AF1-209ENST00000475639 GAGE13Q4V321 117 aa9.65□□□□□ -0.86
U2AF1-209ENST00000475639 FAM19A2Q8N3H0 131 aa9.65□□□□□ -0.86
U2AF1-209ENST00000475639 ABHD17AQ96GS6 310 aa9.65□□□□□ -0.86
U2AF1-209ENST00000475639 ASCL2Q99929 193 aa9.65□□□□□ -0.86
U2AF1-209ENST00000475639 TRAV2A0A0B4J234 112 aa9.65□□□□□ -0.87
U2AF1-209ENST00000475639 DPM2O94777 84 aa9.65□□□□□ -0.87
U2AF1-209ENST00000475639 CTSSP25774 331 aa9.65□□□□□ -0.87
U2AF1-209ENST00000475639 DRD3P35462 400 aa9.65□□□□□ -0.87
U2AF1-209ENST00000475639 PLA2G5P39877 138 aa9.65□□□□□ -0.87
U2AF1-209ENST00000475639 SAXO1Q8IYX7 474 aa9.65□□□□□ -0.87
U2AF1-209ENST00000475639 RPP21Q9H633 154 aaKnown RBP9.65□□□□□ -0.87
U2AF1-209ENST00000475639 IGKV3D-20A0A0C4DH25 116 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 ZNF688P0C7X2 276 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 FBLN7Q53RD9 439 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 OCIAD2Q56VL3 154 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 PEAR1Q5VY43 1037 aaPredicted RBP9.64□□□□□ -0.87
U2AF1-209ENST00000475639 TMEM54Q969K7 222 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 VGLL1Q99990 258 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 TM2D1Q9BX74 207 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 TTTY12Q9BZ98 90 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 FNDC4Q9H6D8 234 aaPredicted RBP9.64□□□□□ -0.87
U2AF1-209ENST00000475639 ST20Q9HBF5 79 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 NRN1Q9NPD7 142 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 ARHGAP21Q5T5U3 1957 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 IGHV2OR16-5A0A0B4J2B6 119 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 IGHMP01871 453 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 ADMP35318 185 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 CD69Q07108 199 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 PNKDQ8N490 385 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 SIGLEC12Q96PQ1 595 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 IFI27L2Q9H2X8 130 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 DPM3Q9P2X0 92 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 A0A1W2PRS3 328 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 IL11P20809 199 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 SEC11AP67812 179 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 TMEM92Q6UXU6 159 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 DTX2Q86UW9 622 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 ZNF703Q9H7S9 590 aaPredicted RBP9.64□□□□□ -0.87
U2AF1-209ENST00000475639 ELOVL5Q9NYP7 299 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 LAMTOR3Q9UHA4 124 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 PCNX1Q96RV3 2341 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 F8WEM9 126 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 PAX9P55771 341 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 OR10J3Q5JRS4 329 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 Q8N976 141 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 OR52E5Q8NH55 327 aa9.64□□□□□ -0.87
U2AF1-209ENST00000475639 VWC2LB2RUY7 222 aa9.63□□□□□ -0.87
U2AF1-209ENST00000475639 DRAM1Q8N682 238 aa9.63□□□□□ -0.87
U2AF1-209ENST00000475639 COQ2Q96H96 371 aa9.63□□□□□ -0.87
U2AF1-209ENST00000475639 ATG2BQ96BY7 2078 aa9.63□□□□□ -0.87
U2AF1-209ENST00000475639 DOCK11Q5JSL3 2073 aa9.63□□□□□ -0.87
U2AF1-209ENST00000475639 A0A087WX48 190 aa9.63□□□□□ -0.87
U2AF1-209ENST00000475639 MUC21A0A0G2JKD1 596 aa9.63□□□□□ -0.87
U2AF1-209ENST00000475639 A0A0U1RRA0 63 aa9.63□□□□□ -0.87
U2AF1-209ENST00000475639 MUC21A0A140T8X8 626 aa9.63□□□□□ -0.87
U2AF1-209ENST00000475639 M0R2P5 195 aa9.63□□□□□ -0.87
U2AF1-209ENST00000475639 SERF1AO75920 110 aa9.63□□□□□ -0.87
U2AF1-209ENST00000475639 MORN2Q502X0 79 aa9.63□□□□□ -0.87
U2AF1-209ENST00000475639 ORMDL2Q53FV1 153 aa9.63□□□□□ -0.87
U2AF1-209ENST00000475639 MUC21Q5SSG8 566 aa9.63□□□□□ -0.87
U2AF1-209ENST00000475639 LILRA6Q6PI73 481 aa9.63□□□□□ -0.87
U2AF1-209ENST00000475639 TMEM144Q7Z5S9 345 aa9.63□□□□□ -0.87
U2AF1-209ENST00000475639 SPANXA1Q9NS26 97 aa9.63□□□□□ -0.87
U2AF1-209ENST00000475639 FBXL7Q9UJT9 491 aa9.63□□□□□ -0.87
U2AF1-209ENST00000475639 ADAMTS9Q9P2N4 1935 aa9.63□□□□□ -0.87
U2AF1-209ENST00000475639 IGLC2P0DOY2 106 aa9.63□□□□□ -0.87
U2AF1-209ENST00000475639 IGLC3P0DOY3 106 aa9.63□□□□□ -0.87
U2AF1-209ENST00000475639 MYOD1P15172 320 aa9.63□□□□□ -0.87
U2AF1-209ENST00000475639 LINC00158P58513 81 aa9.63□□□□□ -0.87
U2AF1-209ENST00000475639 C16orf54Q6UWD8 224 aa9.63□□□□□ -0.87
U2AF1-209ENST00000475639 CACNG8Q8WXS5 425 aa9.63□□□□□ -0.87
U2AF1-209ENST00000475639 TRAV9-2A0A087WT02 112 aa9.62□□□□□ -0.87
U2AF1-209ENST00000475639 TRAV8-1A0A0A6YYK1 113 aa9.62□□□□□ -0.87
U2AF1-209ENST00000475639 CELA2BP08218 269 aaPredicted RBP9.62□□□□□ -0.87
U2AF1-209ENST00000475639 ESDP10768 282 aa9.62□□□□□ -0.87
U2AF1-209ENST00000475639 C1orf162Q8NEQ5 155 aaPredicted RBP9.62□□□□□ -0.87
U2AF1-209ENST00000475639 GPHA2Q96T91 129 aa9.62□□□□□ -0.87
U2AF1-209ENST00000475639 RPP25Q9BUL9 199 aaKnown RBP9.62□□□□□ -0.87
U2AF1-209ENST00000475639 CGAP01215 116 aa9.62□□□□□ -0.87
U2AF1-209ENST00000475639 WNT2P09544 360 aa9.62□□□□□ -0.87
U2AF1-209ENST00000475639 ID3Q02535 119 aa9.62□□□□□ -0.87
U2AF1-209ENST00000475639 SRSF1Q07955 248 aaKnown RBP eCLIP9.62□□□□□ -0.87
U2AF1-209ENST00000475639 SPAARA0A1B0GVQ0 90 aa9.62□□□□□ -0.87
U2AF1-209ENST00000475639 LEPP41159 167 aa9.62□□□□□ -0.87
U2AF1-209ENST00000475639 CHCHD5Q9BSY4 110 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms