RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 LINC01587Q99440 93 aa4.77□□□□□ -1.65
HDAC1-204ENST00000471488 WDR12Q9GZL7 423 aaKnown RBP4.77□□□□□ -1.65
HDAC1-204ENST00000471488 FXYD6Q9H0Q3 95 aa4.77□□□□□ -1.65
HDAC1-204ENST00000471488 BATF3Q9NR55 127 aa4.77□□□□□ -1.65
HDAC1-204ENST00000471488 RABL2AQ9UBK7 228 aaPredicted RBP4.77□□□□□ -1.65
HDAC1-204ENST00000471488 PLA2G2DQ9UNK4 145 aa4.77□□□□□ -1.65
HDAC1-204ENST00000471488 TNFRSF18Q9Y5U5 241 aa4.77□□□□□ -1.65
HDAC1-204ENST00000471488 A0A1W2PPQ1 181 aa4.76□□□□□ -1.65
HDAC1-204ENST00000471488 CBY3A6NI87 242 aa4.76□□□□□ -1.65
HDAC1-204ENST00000471488 BUB3O43684 328 aa4.76□□□□□ -1.65
HDAC1-204ENST00000471488 IGKV1-39P01597 117 aa4.76□□□□□ -1.65
HDAC1-204ENST00000471488 IGKV1D-39P04432 117 aa4.76□□□□□ -1.65
HDAC1-204ENST00000471488 PRB4P10163 310 aaPredicted RBP4.76□□□□□ -1.65
HDAC1-204ENST00000471488 PGAM2P15259 253 aa4.76□□□□□ -1.65
HDAC1-204ENST00000471488 ZNF182P17025 639 aaPredicted RBP4.76□□□□□ -1.65
HDAC1-204ENST00000471488 AZU1P20160 251 aa4.76□□□□□ -1.65
HDAC1-204ENST00000471488 GCSHP23434 173 aa4.76□□□□□ -1.65
HDAC1-204ENST00000471488 HLA-DMAP28067 261 aa4.76□□□□□ -1.65
HDAC1-204ENST00000471488 PSMB3P49720 205 aa4.76□□□□□ -1.65
HDAC1-204ENST00000471488 FGL1Q08830 312 aa4.76□□□□□ -1.65
HDAC1-204ENST00000471488 ESRGQ1W209 222 aa4.76□□□□□ -1.65
HDAC1-204ENST00000471488 TRIM16LQ309B1 348 aa4.76□□□□□ -1.65
HDAC1-204ENST00000471488 SERTAD4-AS1Q5TG53 156 aa4.76□□□□□ -1.65
HDAC1-204ENST00000471488 SFXN4Q6P4A7 337 aa4.76□□□□□ -1.65
HDAC1-204ENST00000471488 SPARTQ8N0X7 666 aa4.76□□□□□ -1.65
HDAC1-204ENST00000471488 OR5H6Q8NGV6 325 aa4.76□□□□□ -1.65
HDAC1-204ENST00000471488 NPIPB3Q92617 1050 aa4.76□□□□□ -1.65
HDAC1-204ENST00000471488 GPR146Q96CH1 333 aa4.76□□□□□ -1.65
HDAC1-204ENST00000471488 IGF2BP2-AS1Q96M15 143 aa4.76□□□□□ -1.65
HDAC1-204ENST00000471488 VCXQ9H320 206 aa4.76□□□□□ -1.65
HDAC1-204ENST00000471488 NOP10Q9NPE3 64 aaKnown RBP4.76□□□□□ -1.65
HDAC1-204ENST00000471488 HEYLQ9NQ87 328 aaPredicted RBP4.76□□□□□ -1.65
HDAC1-204ENST00000471488 DIABLOQ9NR28 239 aa4.76□□□□□ -1.65
HDAC1-204ENST00000471488 RPRMQ9NS64 109 aa4.76□□□□□ -1.65
HDAC1-204ENST00000471488 DOK5Q9P104 306 aa4.76□□□□□ -1.65
HDAC1-204ENST00000471488 U3KQE9 123 aa4.76□□□□□ -1.65
HDAC1-204ENST00000471488 A0A0J9YX75 114 aa4.75□□□□□ -1.65
HDAC1-204ENST00000471488 TRDV1A0A1B0GX56 115 aa4.75□□□□□ -1.65
HDAC1-204ENST00000471488 IGLC1P0CG04 106 aa4.75□□□□□ -1.65
HDAC1-204ENST00000471488 M6PRP20645 277 aa4.75□□□□□ -1.65
HDAC1-204ENST00000471488 HRH1P35367 487 aa4.75□□□□□ -1.65
HDAC1-204ENST00000471488 LYZP61626 148 aa4.75□□□□□ -1.65
HDAC1-204ENST00000471488 RHOBP62745 196 aa4.75□□□□□ -1.65
HDAC1-204ENST00000471488 ZNF79Q15937 498 aa4.75□□□□□ -1.65
HDAC1-204ENST00000471488 CDPF1Q6NVV7 123 aa4.75□□□□□ -1.65
HDAC1-204ENST00000471488 OR8I2Q8N0Y5 310 aa4.75□□□□□ -1.65
HDAC1-204ENST00000471488 SLC25A39Q9BZJ4 359 aaPredicted RBP4.75□□□□□ -1.65
HDAC1-204ENST00000471488 AUNIPQ9H7T9 357 aa4.75□□□□□ -1.65
HDAC1-204ENST00000471488 SLC25A22Q9H936 323 aa4.75□□□□□ -1.65
HDAC1-204ENST00000471488 SEPSECSQ9HD40 501 aaKnown RBP4.75□□□□□ -1.65
HDAC1-204ENST00000471488 C8orf4Q9NR00 106 aa4.75□□□□□ -1.65
HDAC1-204ENST00000471488 PFDN2Q9UHV9 154 aa4.75□□□□□ -1.65
HDAC1-204ENST00000471488 FAT1Q14517 4588 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 A0A0B4J293 547 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 GAGE12BA1L429 117 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 ZFP92A6NM28 416 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 CEBPZOSA8MTT3 80 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 BOLA2-SMG1P6H3BVE0 249 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 ATP6V1G1O75348 118 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 GAGE7O76087 117 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 TOMM40O96008 361 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 CLEC2LP0C7M8 214 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 GAGE12FP0CL80 117 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 GAGE12GP0CL81 117 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 GAGE12IP0CL82 117 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 PSG1P11464 419 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 PI3P19957 117 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 PSMB9P28065 219 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 HSPA13P48723 471 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 TAS2R46P59540 309 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 YPEL3P61236 119 aaPredicted RBP4.74□□□□□ -1.65
HDAC1-204ENST00000471488 CTAG1AP78358 180 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 OR2F1Q13607 317 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 SPATA31B1PQ5VZV4 182 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 IGFL4Q6B9Z1 124 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 LPCAT3Q6P1A2 487 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 PRSS54Q6PEW0 395 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 CADM3Q8N126 398 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 OR10J6PQ8NGY7 276 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 RXFP4Q8TDU9 374 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 RNF125Q96EQ8 232 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 RRNAD1Q96FB5 475 aaKnown RBP4.74□□□□□ -1.65
HDAC1-204ENST00000471488 C20orf173Q96LM9 149 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 TXNL4BQ9NX01 149 aaKnown RBP4.74□□□□□ -1.65
HDAC1-204ENST00000471488 NDUFB11Q9NX14 153 aa4.74□□□□□ -1.65
HDAC1-204ENST00000471488 MRPS16Q9Y3D3 137 aaKnown RBP4.74□□□□□ -1.65
HDAC1-204ENST00000471488 TIMM8BQ9Y5J9 83 aaPredicted RBP4.74□□□□□ -1.65
HDAC1-204ENST00000471488 A0A087WTM6 91 aa4.73□□□□□ -1.65
HDAC1-204ENST00000471488 A0A096LPF7 62 aa4.73□□□□□ -1.65
HDAC1-204ENST00000471488 IGLV5-52A0A0A0MRZ9 124 aa4.73□□□□□ -1.65
HDAC1-204ENST00000471488 FAM25EA8MYX2 175 aa4.73□□□□□ -1.65
HDAC1-204ENST00000471488 ZNF701M0R085 212 aaPredicted RBP4.73□□□□□ -1.65
HDAC1-204ENST00000471488 ISLRO14498 428 aa4.73□□□□□ -1.65
HDAC1-204ENST00000471488 SIVA1O15304 175 aa4.73□□□□□ -1.65
HDAC1-204ENST00000471488 ADAP1O75689 374 aa4.73□□□□□ -1.65
HDAC1-204ENST00000471488 ATG12O94817 140 aa4.73□□□□□ -1.65
HDAC1-204ENST00000471488 IGKV1-5P01602 117 aa4.73□□□□□ -1.65
HDAC1-204ENST00000471488 PLA2G1BP04054 148 aaKnown RBP4.73□□□□□ -1.65
HDAC1-204ENST00000471488 SLC25A4P12235 298 aa4.73□□□□□ -1.65
HDAC1-204ENST00000471488 UCP1P25874 307 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms