RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 CXXC4Q9H2H0 198 aa11.15□□□□□ -0.62
NPHP4-207ENST00000470763 ABCA1O95477 2261 aa11.15□□□□□ -0.62
NPHP4-207ENST00000470763 TANC2Q9HCD6 1990 aa11.14□□□□□ -0.63
NPHP4-207ENST00000470763 KLK10O43240 276 aa11.14□□□□□ -0.63
NPHP4-207ENST00000470763 COX7A2P2O60397 106 aa11.14□□□□□ -0.63
NPHP4-207ENST00000470763 AGFG2O95081 481 aa11.14□□□□□ -0.63
NPHP4-207ENST00000470763 PET117Q6UWS5 81 aa11.14□□□□□ -0.63
NPHP4-207ENST00000470763 NCR2O95944 276 aa11.14□□□□□ -0.63
NPHP4-207ENST00000470763 COX8AP10176 69 aa11.14□□□□□ -0.63
NPHP4-207ENST00000470763 CT45A1Q5HYN5 189 aa11.14□□□□□ -0.63
NPHP4-207ENST00000470763 BHLHA15Q7RTS1 189 aaPredicted RBP11.14□□□□□ -0.63
NPHP4-207ENST00000470763 CT45A3Q8NHU0 189 aa11.14□□□□□ -0.63
NPHP4-207ENST00000470763 MS4A6AQ9H2W1 248 aa11.14□□□□□ -0.63
NPHP4-207ENST00000470763 RPP21Q9H633 154 aaKnown RBP11.14□□□□□ -0.63
NPHP4-207ENST00000470763 PSMB11A5LHX3 300 aa11.14□□□□□ -0.63
NPHP4-207ENST00000470763 CHEK1O14757 476 aa11.14□□□□□ -0.63
NPHP4-207ENST00000470763 IGKV1-16P04430 117 aa11.14□□□□□ -0.63
NPHP4-207ENST00000470763 SLC25A5P05141 298 aaKnown RBP11.14□□□□□ -0.63
NPHP4-207ENST00000470763 FTH1P19P0C7X4 201 aa11.14□□□□□ -0.63
NPHP4-207ENST00000470763 KIR2DS2P43631 304 aa11.14□□□□□ -0.63
NPHP4-207ENST00000470763 GTF2H5Q6ZYL4 71 aa11.14□□□□□ -0.63
NPHP4-207ENST00000470763 C19orf24Q9BVV8 132 aa11.14□□□□□ -0.63
NPHP4-207ENST00000470763 IGKV1D-17A0A075B6S4 117 aa11.13□□□□□ -0.63
NPHP4-207ENST00000470763 FNDC10F2Z333 226 aa11.13□□□□□ -0.63
NPHP4-207ENST00000470763 H3BTX0 84 aa11.13□□□□□ -0.63
NPHP4-207ENST00000470763 PRCDQ00LT1 54 aa11.13□□□□□ -0.63
NPHP4-207ENST00000470763 TMEM177Q53S58 311 aa11.13□□□□□ -0.63
NPHP4-207ENST00000470763 VWA1Q6PCB0 445 aa11.13□□□□□ -0.63
NPHP4-207ENST00000470763 MRPL32Q9BYC8 188 aaKnown RBP11.13□□□□□ -0.63
NPHP4-207ENST00000470763 MOSP00540 346 aa11.13□□□□□ -0.63
NPHP4-207ENST00000470763 OR5AL1P0C617 328 aa11.13□□□□□ -0.63
NPHP4-207ENST00000470763 ZNRD1Q9P1U0 126 aa11.13□□□□□ -0.63
NPHP4-207ENST00000470763 SRRM4A7MD48 611 aaKnown RBP11.12□□□□□ -0.63
NPHP4-207ENST00000470763 C10orf113Q5VZT2 155 aa11.12□□□□□ -0.63
NPHP4-207ENST00000470763 TEX50A0A1B0GTY4 177 aa11.12□□□□□ -0.63
NPHP4-207ENST00000470763 P01737 135 aa11.12□□□□□ -0.63
NPHP4-207ENST00000470763 RNASE2P10153 161 aaKnown RBP11.12□□□□□ -0.63
NPHP4-207ENST00000470763 CD69Q07108 199 aa11.12□□□□□ -0.63
NPHP4-207ENST00000470763 PATE2Q6UY27 113 aa11.12□□□□□ -0.63
NPHP4-207ENST00000470763 CALYQ9NYX4 217 aa11.12□□□□□ -0.63
NPHP4-207ENST00000470763 HSPB8Q9UJY1 196 aa11.12□□□□□ -0.63
NPHP4-207ENST00000470763 DSCAMO60469 2012 aa11.12□□□□□ -0.63
NPHP4-207ENST00000470763 PKD1L2Q7Z442 2459 aa11.12□□□□□ -0.63
NPHP4-207ENST00000470763 A8MWL6 223 aa11.12□□□□□ -0.63
NPHP4-207ENST00000470763 GNG7O60262 68 aa11.12□□□□□ -0.63
NPHP4-207ENST00000470763 SEC11AP67812 179 aa11.12□□□□□ -0.63
NPHP4-207ENST00000470763 LINC01545Q5VT33 79 aa11.12□□□□□ -0.63
NPHP4-207ENST00000470763 FXYD5Q96DB9 178 aa11.12□□□□□ -0.63
NPHP4-207ENST00000470763 RABAC1Q9UI14 185 aa11.12□□□□□ -0.63
NPHP4-207ENST00000470763 PRNDQ9UKY0 176 aa11.12□□□□□ -0.63
NPHP4-207ENST00000470763 SMG1Q96Q15 3661 aaKnown RBP11.11□□□□□ -0.63
NPHP4-207ENST00000470763 PGPA6NDG6 321 aa11.11□□□□□ -0.63
NPHP4-207ENST00000470763 C9orf118A6NHY6 69 aa11.11□□□□□ -0.63
NPHP4-207ENST00000470763 DEFB127Q9H1M4 99 aa11.11□□□□□ -0.63
NPHP4-207ENST00000470763 PRSS47A8MTI9 375 aa11.11□□□□□ -0.63
NPHP4-207ENST00000470763 J3QW42 95 aa11.11□□□□□ -0.63
NPHP4-207ENST00000470763 PRB4P10163 310 aaPredicted RBP11.11□□□□□ -0.63
NPHP4-207ENST00000470763 IGHV1-2P23083 117 aa11.11□□□□□ -0.63
NPHP4-207ENST00000470763 GUSBP1Q15486 140 aa11.11□□□□□ -0.63
NPHP4-207ENST00000470763 Q5PR19 223 aa11.11□□□□□ -0.63
NPHP4-207ENST00000470763 ABHD17BQ5VST6 288 aa11.11□□□□□ -0.63
NPHP4-207ENST00000470763 OR10AG1Q8NH19 301 aa11.11□□□□□ -0.63
NPHP4-207ENST00000470763 ABI3Q9P2A4 366 aa11.11□□□□□ -0.63
NPHP4-207ENST00000470763 EPDR1Q9UM22 224 aa11.11□□□□□ -0.63
NPHP4-207ENST00000470763 K7EP34 96 aa11.1□□□□□ -0.63
NPHP4-207ENST00000470763 KIR3DS1Q14943 382 aa11.1□□□□□ -0.63
NPHP4-207ENST00000470763 RNFT1Q5M7Z0 435 aa11.1□□□□□ -0.63
NPHP4-207ENST00000470763 Q71RC1 249 aaPredicted RBP11.1□□□□□ -0.63
NPHP4-207ENST00000470763 OR2K2Q8NGT1 345 aa11.1□□□□□ -0.63
NPHP4-207ENST00000470763 RND1Q92730 232 aa11.1□□□□□ -0.63
NPHP4-207ENST00000470763 TMEM186Q96B77 213 aa11.1□□□□□ -0.63
NPHP4-207ENST00000470763 CLUHP3Q96NS8 147 aa11.1□□□□□ -0.63
NPHP4-207ENST00000470763 A0A0G2JLM5 398 aa11.1□□□□□ -0.63
NPHP4-207ENST00000470763 UPK2O00526 184 aa11.1□□□□□ -0.63
NPHP4-207ENST00000470763 C2orf83Q53S99 150 aa11.1□□□□□ -0.63
NPHP4-207ENST00000470763 PDPNQ86YL7 162 aa11.1□□□□□ -0.63
NPHP4-207ENST00000470763 OR4A5Q8NH83 315 aa11.1□□□□□ -0.63
NPHP4-207ENST00000470763 GPR82Q96P67 336 aa11.1□□□□□ -0.63
NPHP4-207ENST00000470763 ZNF257Q9Y2Q1 563 aa11.1□□□□□ -0.63
NPHP4-207ENST00000470763 MSRB2Q9Y3D2 182 aa11.1□□□□□ -0.63
NPHP4-207ENST00000470763 F2RL2O00254 374 aa11.1□□□□□ -0.63
NPHP4-207ENST00000470763 APOHP02749 345 aaPredicted RBP11.1□□□□□ -0.63
NPHP4-207ENST00000470763 FAM201AQ5SY85 155 aa11.1□□□□□ -0.63
NPHP4-207ENST00000470763 LINC00305Q7Z4B0 112 aa11.1□□□□□ -0.63
NPHP4-207ENST00000470763 OR2Z1Q8NG97 314 aa11.1□□□□□ -0.63
NPHP4-207ENST00000470763 OR8A1Q8NGG7 326 aa11.1□□□□□ -0.63
NPHP4-207ENST00000470763 NEU4Q8WWR8 484 aaPredicted RBP11.1□□□□□ -0.63
NPHP4-207ENST00000470763 NPIPB3Q92617 1050 aa11.1□□□□□ -0.63
NPHP4-207ENST00000470763 ZFYVE26Q68DK2 2539 aa11.09□□□□□ -0.63
NPHP4-207ENST00000470763 MGST3O14880 152 aa11.09□□□□□ -0.63
NPHP4-207ENST00000470763 RBPMS2Q6ZRY4 209 aaKnown RBP11.09□□□□□ -0.63
NPHP4-207ENST00000470763 ITLN1Q8WWA0 313 aa11.09□□□□□ -0.63
NPHP4-207ENST00000470763 DAZAP1Q96EP5 407 aaKnown RBP11.09□□□□□ -0.63
NPHP4-207ENST00000470763 DSCAML1Q8TD84 2053 aa11.09□□□□□ -0.63
NPHP4-207ENST00000470763 ORM2P19652 201 aa11.09□□□□□ -0.63
NPHP4-207ENST00000470763 ACP1P24666 158 aa11.09□□□□□ -0.63
NPHP4-207ENST00000470763 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.08□□□□□ -0.64
NPHP4-207ENST00000470763 A6NDN8 102 aa11.08□□□□□ -0.64
NPHP4-207ENST00000470763 E7EUB6 86 aa11.08□□□□□ -0.64
NPHP4-207ENST00000470763 SAA1P0DJI8 122 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms