RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 SLC25A2Q9BXI2 301 aa14.2□□□□□ -0.14
SMC4-211ENST00000469858 F8W735 103 aaPredicted RBP14.19□□□□□ -0.14
SMC4-211ENST00000469858 RD3LP0DJH9 198 aa14.19□□□□□ -0.14
SMC4-211ENST00000469858 ATP5G3P48201 142 aa14.19□□□□□ -0.14
SMC4-211ENST00000469858 RHOGP84095 191 aa14.19□□□□□ -0.14
SMC4-211ENST00000469858 C9orf139Q6ZV77 190 aa14.19□□□□□ -0.14
SMC4-211ENST00000469858 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.19□□□□□ -0.14
SMC4-211ENST00000469858 OR5AU1Q8NGC0 362 aa14.19□□□□□ -0.14
SMC4-211ENST00000469858 C20orf24Q9BUV8 137 aa14.19□□□□□ -0.14
SMC4-211ENST00000469858 TEX15Q9BXT5 2789 aa14.19□□□□□ -0.14
SMC4-211ENST00000469858 M0R036 132 aa14.18□□□□□ -0.14
SMC4-211ENST00000469858 HYPMO75409 117 aa14.18□□□□□ -0.14
SMC4-211ENST00000469858 IGHG2P01859 326 aa14.18□□□□□ -0.14
SMC4-211ENST00000469858 FABP1P07148 127 aa14.18□□□□□ -0.14
SMC4-211ENST00000469858 OR10J4P0C629 311 aa14.18□□□□□ -0.14
SMC4-211ENST00000469858 C15orf32Q32M92 178 aa14.18□□□□□ -0.14
SMC4-211ENST00000469858 FAM167A-AS1Q96KT0 104 aa14.18□□□□□ -0.14
SMC4-211ENST00000469858 ZNF48Q96MX3 618 aaPredicted RBP14.18□□□□□ -0.14
SMC4-211ENST00000469858 MS4A10Q96PG2 267 aa14.18□□□□□ -0.14
SMC4-211ENST00000469858 UNC79Q9P2D8 2635 aa14.18□□□□□ -0.14
SMC4-211ENST00000469858 TRAV30A0A087WSZ9 112 aa14.18□□□□□ -0.14
SMC4-211ENST00000469858 CRIP2P52943 208 aaPredicted RBP14.18□□□□□ -0.14
SMC4-211ENST00000469858 PLP1P60201 277 aa14.18□□□□□ -0.14
SMC4-211ENST00000469858 C19orf54Q5BKX5 351 aa14.18□□□□□ -0.14
SMC4-211ENST00000469858 Q6ZS46 218 aa14.18□□□□□ -0.14
SMC4-211ENST00000469858 TMEM167BQ9NRX6 74 aa14.18□□□□□ -0.14
SMC4-211ENST00000469858 YTHDF2Q9Y5A9 579 aaKnown RBP14.18□□□□□ -0.14
SMC4-211ENST00000469858 ITPR2Q14571 2701 aa14.17□□□□□ -0.14
SMC4-211ENST00000469858 TRBV9A0A0B4J1U6 114 aa14.17□□□□□ -0.14
SMC4-211ENST00000469858 OR2T8A6NH00 312 aa14.17□□□□□ -0.14
SMC4-211ENST00000469858 H3BQ15 152 aa14.17□□□□□ -0.14
SMC4-211ENST00000469858 TOMM40O96008 361 aa14.17□□□□□ -0.14
SMC4-211ENST00000469858 KLK9Q2XQG4 91 aa14.17□□□□□ -0.14
SMC4-211ENST00000469858 AWAT1Q58HT5 328 aa14.17□□□□□ -0.14
SMC4-211ENST00000469858 OR51G1Q8NGK1 321 aa14.17□□□□□ -0.14
SMC4-211ENST00000469858 KLK9Q9UKQ9 250 aa14.17□□□□□ -0.14
SMC4-211ENST00000469858 TMEM250H0YL14 139 aa14.16□□□□□ -0.14
SMC4-211ENST00000469858 IGF1P05019 195 aa14.16□□□□□ -0.14
SMC4-211ENST00000469858 OR5R1Q8NH85 324 aa14.16□□□□□ -0.14
SMC4-211ENST00000469858 VN1R17PQ8TDU5 208 aa14.16□□□□□ -0.14
SMC4-211ENST00000469858 NOL4LQ96MY1 436 aaPredicted RBP14.16□□□□□ -0.14
SMC4-211ENST00000469858 NIPSNAP3BQ9BS92 247 aa14.16□□□□□ -0.14
SMC4-211ENST00000469858 HIGD1AQ9Y241 93 aa14.16□□□□□ -0.14
SMC4-211ENST00000469858 FAM74A7A6NL05 159 aa14.16□□□□□ -0.14
SMC4-211ENST00000469858 PYYP10082 97 aa14.16□□□□□ -0.14
SMC4-211ENST00000469858 UBE2L3P68036 154 aaKnown RBP14.16□□□□□ -0.14
SMC4-211ENST00000469858 ZNF674Q2M3X9 581 aa14.16□□□□□ -0.14
SMC4-211ENST00000469858 Q6YL49 198 aa14.16□□□□□ -0.14
SMC4-211ENST00000469858 IL17RELQ6ZVW7 336 aa14.16□□□□□ -0.14
SMC4-211ENST00000469858 NECAP1Q8NC96 275 aa14.16□□□□□ -0.14
SMC4-211ENST00000469858 RPUSD4Q96CM3 377 aaKnown RBP14.16□□□□□ -0.14
SMC4-211ENST00000469858 NUPL2O15504 423 aaKnown RBP14.15□□□□□ -0.14
SMC4-211ENST00000469858 YPEL3P61236 119 aaPredicted RBP14.15□□□□□ -0.14
SMC4-211ENST00000469858 FAM74A3Q4VXF1 159 aa14.15□□□□□ -0.14
SMC4-211ENST00000469858 TMEM88Q6PEY1 159 aa14.15□□□□□ -0.14
SMC4-211ENST00000469858 PAXXQ9BUH6 204 aa14.15□□□□□ -0.14
SMC4-211ENST00000469858 ZNF727A8MUV8 499 aa14.14□□□□□ -0.15
SMC4-211ENST00000469858 PDE6DO43924 150 aa14.14□□□□□ -0.15
SMC4-211ENST00000469858 IL4P05112 153 aa14.14□□□□□ -0.15
SMC4-211ENST00000469858 AKR1C3P42330 323 aa14.14□□□□□ -0.15
SMC4-211ENST00000469858 ZNF502Q8TBZ5 544 aa14.14□□□□□ -0.15
SMC4-211ENST00000469858 TXN2Q99757 166 aa14.14□□□□□ -0.15
SMC4-211ENST00000469858 OR51M1Q9H341 326 aa14.14□□□□□ -0.15
SMC4-211ENST00000469858 VPREB3Q9UKI3 123 aa14.14□□□□□ -0.15
SMC4-211ENST00000469858 AP4M1O00189 453 aa14.14□□□□□ -0.15
SMC4-211ENST00000469858 SCGB2A1O75556 95 aa14.14□□□□□ -0.15
SMC4-211ENST00000469858 FCGR2BP31994 310 aaPredicted RBP14.14□□□□□ -0.15
SMC4-211ENST00000469858 GPR183P32249 361 aa14.14□□□□□ -0.15
SMC4-211ENST00000469858 LEMD1Q68G75 181 aa14.14□□□□□ -0.15
SMC4-211ENST00000469858 ZNF491Q8N8L2 437 aa14.14□□□□□ -0.15
SMC4-211ENST00000469858 RNF125Q96EQ8 232 aa14.14□□□□□ -0.15
SMC4-211ENST00000469858 SMIM7Q9BQ49 75 aa14.14□□□□□ -0.15
SMC4-211ENST00000469858 TXNDC17Q9BRA2 123 aa14.14□□□□□ -0.15
SMC4-211ENST00000469858 PARLQ9H300 379 aa14.14□□□□□ -0.15
SMC4-211ENST00000469858 RPS10P5Q9NQ39 176 aa14.14□□□□□ -0.15
SMC4-211ENST00000469858 FASNP49327 2511 aaKnown RBP14.14□□□□□ -0.15
SMC4-211ENST00000469858 FLNAP21333 2647 aaKnown RBP14.14□□□□□ -0.15
SMC4-211ENST00000469858 DNASE2O00115 360 aaPredicted RBP14.13□□□□□ -0.15
SMC4-211ENST00000469858 NDUFS6O75380 124 aaKnown RBP14.13□□□□□ -0.15
SMC4-211ENST00000469858 CTSGP08311 255 aa14.13□□□□□ -0.15
SMC4-211ENST00000469858 CBLN2Q8IUK8 224 aa14.13□□□□□ -0.15
SMC4-211ENST00000469858 Q8WTZ3 238 aa14.13□□□□□ -0.15
SMC4-211ENST00000469858 TVP23CQ96ET8 276 aa14.13□□□□□ -0.15
SMC4-211ENST00000469858 CHRDL1Q9BU40 450 aa14.13□□□□□ -0.15
SMC4-211ENST00000469858 C7orf77A4D0Y5 90 aa14.13□□□□□ -0.15
SMC4-211ENST00000469858 F6UZH7 168 aa14.13□□□□□ -0.15
SMC4-211ENST00000469858 HOXA3O43365 443 aaPredicted RBP14.13□□□□□ -0.15
SMC4-211ENST00000469858 NPPCP23582 126 aa14.13□□□□□ -0.15
SMC4-211ENST00000469858 SUN5Q8TC36 379 aa14.13□□□□□ -0.15
SMC4-211ENST00000469858 EEF1AKMT3Q96AZ1 226 aa14.13□□□□□ -0.15
SMC4-211ENST00000469858 SLC25A39Q9BZJ4 359 aaPredicted RBP14.13□□□□□ -0.15
SMC4-211ENST00000469858 MRPL27Q9P0M9 148 aaKnown RBP14.13□□□□□ -0.15
SMC4-211ENST00000469858 SCO2A0A1W2PP80 73 aa14.12□□□□□ -0.15
SMC4-211ENST00000469858 TRGV3P03979 118 aa14.12□□□□□ -0.15
SMC4-211ENST00000469858 SNRPCP09234 159 aaKnown RBP14.12□□□□□ -0.15
SMC4-211ENST00000469858 PPIFP30405 207 aaKnown RBP14.12□□□□□ -0.15
SMC4-211ENST00000469858 ADMP35318 185 aa14.12□□□□□ -0.15
SMC4-211ENST00000469858 TMEM95Q3KNT9 176 aa14.12□□□□□ -0.15
SMC4-211ENST00000469858 CCDC140Q96MF4 163 aa14.12□□□□□ -0.15
SMC4-211ENST00000469858 ARL2-SNX15V9GYD0 113 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms