RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 LILRB2Q8N423 598 aa9.6□□□□□ -0.87
SPTLC1-204ENST00000469778 TMEM217Q8N7C4 229 aa9.6□□□□□ -0.87
SPTLC1-204ENST00000469778 INO80EQ8NBZ0 244 aaPredicted RBP9.6□□□□□ -0.87
SPTLC1-204ENST00000469778 OR2T35Q8NGX2 323 aa9.6□□□□□ -0.87
SPTLC1-204ENST00000469778 WDR89Q96FK6 387 aaPredicted RBP9.6□□□□□ -0.87
SPTLC1-204ENST00000469778 ZFAND3Q9H8U3 227 aa9.6□□□□□ -0.87
SPTLC1-204ENST00000469778 MBD2Q9UBB5 411 aa9.6□□□□□ -0.87
SPTLC1-204ENST00000469778 SMPXQ9UHP9 88 aa9.6□□□□□ -0.87
SPTLC1-204ENST00000469778 SLC45A2Q9UMX9 530 aa9.6□□□□□ -0.87
SPTLC1-204ENST00000469778 LSM4Q9Y4Z0 139 aaKnown RBP9.6□□□□□ -0.87
SPTLC1-204ENST00000469778 IGKV1OR2-108A0A075B7D4 117 aa9.59□□□□□ -0.87
SPTLC1-204ENST00000469778 IGHV3-35A0A0C4DH35 117 aa9.59□□□□□ -0.87
SPTLC1-204ENST00000469778 IGHV7-4-1A0A0J9YVY3 117 aa9.59□□□□□ -0.87
SPTLC1-204ENST00000469778 SMCO3A2RU48 225 aa9.59□□□□□ -0.87
SPTLC1-204ENST00000469778 CRYBB3P26998 211 aa9.59□□□□□ -0.87
SPTLC1-204ENST00000469778 ARL16Q0P5N6 197 aa9.59□□□□□ -0.87
SPTLC1-204ENST00000469778 DEFB114Q30KQ6 69 aa9.59□□□□□ -0.87
SPTLC1-204ENST00000469778 TM4SF20Q53R12 229 aa9.59□□□□□ -0.87
SPTLC1-204ENST00000469778 LAMTOR1Q6IAA8 161 aa9.59□□□□□ -0.87
SPTLC1-204ENST00000469778 LCN12Q6JVE5 192 aa9.59□□□□□ -0.87
SPTLC1-204ENST00000469778 ZNF546Q86UE3 836 aa9.59□□□□□ -0.87
SPTLC1-204ENST00000469778 BPIFCQ8NFQ6 507 aa9.59□□□□□ -0.87
SPTLC1-204ENST00000469778 DYNLRB2Q8TF09 96 aa9.59□□□□□ -0.87
SPTLC1-204ENST00000469778 GRAMD2BQ96HH9 432 aa9.59□□□□□ -0.87
SPTLC1-204ENST00000469778 AQP10Q96PS8 301 aa9.59□□□□□ -0.87
SPTLC1-204ENST00000469778 WDR83OSQ9Y284 106 aa9.59□□□□□ -0.87
SPTLC1-204ENST00000469778 WI2-2373I1.2A0A1W2PRP0 233 aa9.58□□□□□ -0.88
SPTLC1-204ENST00000469778 EIF2B2P49770 351 aaKnown RBP9.58□□□□□ -0.88
SPTLC1-204ENST00000469778 AP2S1P53680 142 aaPredicted RBP9.58□□□□□ -0.88
SPTLC1-204ENST00000469778 PLP1P60201 277 aa9.58□□□□□ -0.88
SPTLC1-204ENST00000469778 NHLH2Q02577 135 aa9.58□□□□□ -0.88
SPTLC1-204ENST00000469778 BEAN1Q3B7T3 259 aa9.58□□□□□ -0.88
SPTLC1-204ENST00000469778 CYP2G1PQ6ZSU1 146 aa9.58□□□□□ -0.88
SPTLC1-204ENST00000469778 OR5C1Q8NGR4 320 aa9.58□□□□□ -0.88
SPTLC1-204ENST00000469778 RNF125Q96EQ8 232 aa9.58□□□□□ -0.88
SPTLC1-204ENST00000469778 ZNF414Q96IQ9 312 aa9.58□□□□□ -0.88
SPTLC1-204ENST00000469778 VSIRQ9H7M9 311 aa9.58□□□□□ -0.88
SPTLC1-204ENST00000469778 KCNIP2Q9NS61 270 aa9.58□□□□□ -0.88
SPTLC1-204ENST00000469778 RABAC1Q9UI14 185 aa9.58□□□□□ -0.88
SPTLC1-204ENST00000469778 HSPB11Q9Y547 144 aa9.58□□□□□ -0.88
SPTLC1-204ENST00000469778 G3V4G9 280 aa9.57□□□□□ -0.88
SPTLC1-204ENST00000469778 CCNKO75909 580 aa9.57□□□□□ -0.88
SPTLC1-204ENST00000469778 IL4P05112 153 aa9.57□□□□□ -0.88
SPTLC1-204ENST00000469778 HNRNPCP07910 306 aaKnown RBP eCLIP9.57□□□□□ -0.88
SPTLC1-204ENST00000469778 ZNF90Q03938 601 aa9.57□□□□□ -0.88
SPTLC1-204ENST00000469778 C1orf194Q5T5A4 169 aa9.57□□□□□ -0.88
SPTLC1-204ENST00000469778 RHPN1-AS1Q9BWJ2 59 aa9.57□□□□□ -0.88
SPTLC1-204ENST00000469778 U3KQE9 123 aa9.57□□□□□ -0.88
SPTLC1-204ENST00000469778 ELOA3CA0A087WX78 387 aaPredicted RBP9.56□□□□□ -0.88
SPTLC1-204ENST00000469778 CHEK1O14757 476 aa9.56□□□□□ -0.88
SPTLC1-204ENST00000469778 AGPAT2O15120 278 aa9.56□□□□□ -0.88
SPTLC1-204ENST00000469778 IFNA5P01569 189 aa9.56□□□□□ -0.88
SPTLC1-204ENST00000469778 CAMLGP49069 296 aa9.56□□□□□ -0.88
SPTLC1-204ENST00000469778 CMC4P56277 68 aaPredicted RBP9.56□□□□□ -0.88
SPTLC1-204ENST00000469778 BTNL8Q6UX41 500 aa9.56□□□□□ -0.88
SPTLC1-204ENST00000469778 ADAMTSL5Q6ZMM2 481 aa9.56□□□□□ -0.88
SPTLC1-204ENST00000469778 Q6ZRG5 221 aa9.56□□□□□ -0.88
SPTLC1-204ENST00000469778 RBPMS2Q6ZRY4 209 aaKnown RBP9.56□□□□□ -0.88
SPTLC1-204ENST00000469778 ATP5SQ99766 215 aa9.56□□□□□ -0.88
SPTLC1-204ENST00000469778 NEURL2Q9BR09 285 aa9.56□□□□□ -0.88
SPTLC1-204ENST00000469778 PARD6GQ9BYG4 376 aaPredicted RBP9.56□□□□□ -0.88
SPTLC1-204ENST00000469778 FBXL17Q9UF56 701 aa9.56□□□□□ -0.88
SPTLC1-204ENST00000469778 ZNF256Q9Y2P7 627 aaPredicted RBP9.56□□□□□ -0.88
SPTLC1-204ENST00000469778 HELTA6NFD8 242 aa9.55□□□□□ -0.88
SPTLC1-204ENST00000469778 HMSDA8MTL9 139 aa9.55□□□□□ -0.88
SPTLC1-204ENST00000469778 TSPAN4O14817 238 aa9.55□□□□□ -0.88
SPTLC1-204ENST00000469778 HYPMO75409 117 aa9.55□□□□□ -0.88
SPTLC1-204ENST00000469778 RPL29P47914 159 aaKnown RBP9.55□□□□□ -0.88
SPTLC1-204ENST00000469778 PAFAH1B2P68402 229 aa9.55□□□□□ -0.88
SPTLC1-204ENST00000469778 ZNF266Q14584 549 aa9.55□□□□□ -0.88
SPTLC1-204ENST00000469778 ZNF709Q8N972 641 aa9.55□□□□□ -0.88
SPTLC1-204ENST00000469778 SCGB1C1Q8TD33 95 aa9.55□□□□□ -0.88
SPTLC1-204ENST00000469778 SPAG8Q99932 426 aaPredicted RBP9.55□□□□□ -0.88
SPTLC1-204ENST00000469778 TNFSF18Q9UNG2 199 aa9.55□□□□□ -0.88
SPTLC1-204ENST00000469778 NBEAL1Q6ZS30 2694 aa9.54□□□□□ -0.88
SPTLC1-204ENST00000469778 TRAV2A0A0B4J234 112 aa9.54□□□□□ -0.88
SPTLC1-204ENST00000469778 C17orf112F2Z3M2 114 aa9.54□□□□□ -0.88
SPTLC1-204ENST00000469778 TAAR5O14804 337 aa9.54□□□□□ -0.88
SPTLC1-204ENST00000469778 BUB3O43684 328 aa9.54□□□□□ -0.88
SPTLC1-204ENST00000469778 OR2F1Q13607 317 aa9.54□□□□□ -0.88
SPTLC1-204ENST00000469778 CD300EQ496F6 205 aaPredicted RBP9.54□□□□□ -0.88
SPTLC1-204ENST00000469778 Q5BKY6 102 aa9.54□□□□□ -0.88
SPTLC1-204ENST00000469778 TCTE3Q8IZS6 198 aa9.54□□□□□ -0.88
SPTLC1-204ENST00000469778 GPR82Q96P67 336 aa9.54□□□□□ -0.88
SPTLC1-204ENST00000469778 MGST2Q99735 147 aa9.54□□□□□ -0.88
SPTLC1-204ENST00000469778 MLXQ9UH92 298 aa9.54□□□□□ -0.88
SPTLC1-204ENST00000469778 IGHV3OR16-8A0A075B7F1 116 aa9.53□□□□□ -0.88
SPTLC1-204ENST00000469778 FXYD6-FXYD2A0A087WZ82 144 aa9.53□□□□□ -0.88
SPTLC1-204ENST00000469778 UBE2L5PA0A1B0GUS4 154 aa9.53□□□□□ -0.88
SPTLC1-204ENST00000469778 ZNF207O43670 478 aaKnown RBP9.53□□□□□ -0.88
SPTLC1-204ENST00000469778 LINC00869P0C866 280 aa9.53□□□□□ -0.88
SPTLC1-204ENST00000469778 FGF7P21781 194 aa9.53□□□□□ -0.88
SPTLC1-204ENST00000469778 LYZP61626 148 aa9.53□□□□□ -0.88
SPTLC1-204ENST00000469778 PRR20EP86478 221 aa9.53□□□□□ -0.88
SPTLC1-204ENST00000469778 PRR20CP86479 221 aa9.53□□□□□ -0.88
SPTLC1-204ENST00000469778 PRR20DP86480 221 aa9.53□□□□□ -0.88
SPTLC1-204ENST00000469778 PRR20BP86481 221 aa9.53□□□□□ -0.88
SPTLC1-204ENST00000469778 PRR20AP86496 221 aa9.53□□□□□ -0.88
SPTLC1-204ENST00000469778 CLINT1Q14677 625 aa9.53□□□□□ -0.88
SPTLC1-204ENST00000469778 USF2Q15853 346 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms