RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 IGLC1P0CG04 106 aa9.5□□□□□ -0.89
HDAC4-207ENST00000461113 NPPCP23582 126 aa9.5□□□□□ -0.89
HDAC4-207ENST00000461113 PAX9P55771 341 aa9.5□□□□□ -0.89
HDAC4-207ENST00000461113 DLK1P80370 383 aa9.5□□□□□ -0.89
HDAC4-207ENST00000461113 IL15RAQ13261 267 aa9.5□□□□□ -0.89
HDAC4-207ENST00000461113 RAB31Q13636 194 aa9.5□□□□□ -0.89
HDAC4-207ENST00000461113 TOMM20LQ6UXN7 152 aa9.5□□□□□ -0.89
HDAC4-207ENST00000461113 UNQ9165/PRO28630Q6UXU0 137 aa9.5□□□□□ -0.89
HDAC4-207ENST00000461113 RBPMS2Q6ZRY4 209 aaKnown RBP9.5□□□□□ -0.89
HDAC4-207ENST00000461113 ACOT7LQ6ZUV0 252 aa9.5□□□□□ -0.89
HDAC4-207ENST00000461113 LILRB2Q8N423 598 aa9.5□□□□□ -0.89
HDAC4-207ENST00000461113 THAP6Q8TBB0 222 aa9.5□□□□□ -0.89
HDAC4-207ENST00000461113 PPP1R1CQ8WVI7 109 aa9.5□□□□□ -0.89
HDAC4-207ENST00000461113 CITED4Q96RK1 184 aa9.5□□□□□ -0.89
HDAC4-207ENST00000461113 LYRM2Q9NU23 88 aaPredicted RBP9.5□□□□□ -0.89
HDAC4-207ENST00000461113 MRPL36Q9P0J6 103 aaKnown RBP9.5□□□□□ -0.89
HDAC4-207ENST00000461113 ZNF256Q9Y2P7 627 aaPredicted RBP9.5□□□□□ -0.89
HDAC4-207ENST00000461113 TMEM213A2RRL7 107 aa9.49□□□□□ -0.89
HDAC4-207ENST00000461113 FAM24AA6NFZ4 105 aa9.49□□□□□ -0.89
HDAC4-207ENST00000461113 FNDC10F2Z333 226 aa9.49□□□□□ -0.89
HDAC4-207ENST00000461113 ZNF207O43670 478 aaKnown RBP9.49□□□□□ -0.89
HDAC4-207ENST00000461113 JTBO76095 146 aa9.49□□□□□ -0.89
HDAC4-207ENST00000461113 TOMM40O96008 361 aa9.49□□□□□ -0.89
HDAC4-207ENST00000461113 IGKV1-17P01599 117 aa9.49□□□□□ -0.89
HDAC4-207ENST00000461113 IGLV1-51P01701 117 aa9.49□□□□□ -0.89
HDAC4-207ENST00000461113 CD5P06127 495 aa9.49□□□□□ -0.89
HDAC4-207ENST00000461113 S100A11P31949 105 aa9.49□□□□□ -0.89
HDAC4-207ENST00000461113 NUP62P37198 522 aaPredicted RBP9.49□□□□□ -0.89
HDAC4-207ENST00000461113 P2RY1P47900 373 aa9.49□□□□□ -0.89
HDAC4-207ENST00000461113 SULT1A1P50225 295 aa9.49□□□□□ -0.89
HDAC4-207ENST00000461113 H2BFSP57053 126 aa9.49□□□□□ -0.89
HDAC4-207ENST00000461113 RRAS2P62070 204 aaPredicted RBP9.49□□□□□ -0.89
HDAC4-207ENST00000461113 FGL1Q08830 312 aa9.49□□□□□ -0.89
HDAC4-207ENST00000461113 IL34Q6ZMJ4 242 aa9.49□□□□□ -0.89
HDAC4-207ENST00000461113 TMEM144Q7Z5S9 345 aa9.49□□□□□ -0.89
HDAC4-207ENST00000461113 OR51G1Q8NGK1 321 aa9.49□□□□□ -0.89
HDAC4-207ENST00000461113 GRAMD2BQ96HH9 432 aa9.49□□□□□ -0.89
HDAC4-207ENST00000461113 TRGV9Q99603 122 aa9.49□□□□□ -0.89
HDAC4-207ENST00000461113 NPVFQ9HCQ7 196 aa9.49□□□□□ -0.89
HDAC4-207ENST00000461113 IGHV3OR16-8A0A075B7F1 116 aa9.48□□□□□ -0.89
HDAC4-207ENST00000461113 CST7O76096 145 aa9.48□□□□□ -0.89
HDAC4-207ENST00000461113 EIF2B2P49770 351 aaKnown RBP9.48□□□□□ -0.89
HDAC4-207ENST00000461113 SLC38A11Q08AI6 406 aa9.48□□□□□ -0.89
HDAC4-207ENST00000461113 FCN2Q15485 313 aa9.48□□□□□ -0.89
HDAC4-207ENST00000461113 GUCA2BQ16661 112 aa9.48□□□□□ -0.89
HDAC4-207ENST00000461113 ATP6V1FQ16864 119 aa9.48□□□□□ -0.89
HDAC4-207ENST00000461113 S100A7AQ86SG5 101 aa9.48□□□□□ -0.89
HDAC4-207ENST00000461113 TMEM252Q8N6L7 170 aa9.48□□□□□ -0.89
HDAC4-207ENST00000461113 TMEM217Q8N7C4 229 aa9.48□□□□□ -0.89
HDAC4-207ENST00000461113 TRAV25A0A0B4J276 109 aa9.47□□□□□ -0.89
HDAC4-207ENST00000461113 IGHV7-4-1A0A0J9YVY3 117 aa9.47□□□□□ -0.89
HDAC4-207ENST00000461113 MPC2O95563 127 aa9.47□□□□□ -0.89
HDAC4-207ENST00000461113 IL4P05112 153 aa9.47□□□□□ -0.89
HDAC4-207ENST00000461113 C8orf88P0DMB2 117 aa9.47□□□□□ -0.89
HDAC4-207ENST00000461113 GP9P14770 177 aa9.47□□□□□ -0.89
HDAC4-207ENST00000461113 SELENOTP62341 195 aa9.47□□□□□ -0.89
HDAC4-207ENST00000461113 PAFAH1B2P68402 229 aa9.47□□□□□ -0.89
HDAC4-207ENST00000461113 BAXQ07812 192 aa9.47□□□□□ -0.89
HDAC4-207ENST00000461113 DEFB114Q30KQ6 69 aa9.47□□□□□ -0.89
HDAC4-207ENST00000461113 CD300EQ496F6 205 aaPredicted RBP9.47□□□□□ -0.89
HDAC4-207ENST00000461113 TEPPQ6URK8 271 aa9.47□□□□□ -0.89
HDAC4-207ENST00000461113 BTNL8Q6UX41 500 aa9.47□□□□□ -0.89
HDAC4-207ENST00000461113 GTSCR1Q86UQ5 136 aa9.47□□□□□ -0.89
HDAC4-207ENST00000461113 THAP8Q8NA92 274 aa9.47□□□□□ -0.89
HDAC4-207ENST00000461113 BPIFCQ8NFQ6 507 aa9.47□□□□□ -0.89
HDAC4-207ENST00000461113 PPP1R14BQ96C90 147 aa9.47□□□□□ -0.89
HDAC4-207ENST00000461113 PBDC1Q9BVG4 233 aa9.47□□□□□ -0.89
HDAC4-207ENST00000461113 RHPN1-AS1Q9BWJ2 59 aa9.47□□□□□ -0.89
HDAC4-207ENST00000461113 UQCC1Q9NVA1 299 aa9.47□□□□□ -0.89
HDAC4-207ENST00000461113 SMPXQ9UHP9 88 aa9.47□□□□□ -0.89
HDAC4-207ENST00000461113 RABAC1Q9UI14 185 aa9.47□□□□□ -0.89
HDAC4-207ENST00000461113 PMS2P5A8MQ11 134 aa9.46□□□□□ -0.9
HDAC4-207ENST00000461113 PRSS46E5RG02 174 aa9.46□□□□□ -0.9
HDAC4-207ENST00000461113 HNRNPCP07910 306 aaKnown RBP eCLIP9.46□□□□□ -0.9
HDAC4-207ENST00000461113 GIPP09681 153 aaPredicted RBP9.46□□□□□ -0.9
HDAC4-207ENST00000461113 PSG1P11464 419 aa9.46□□□□□ -0.9
HDAC4-207ENST00000461113 RAP2BP61225 183 aa9.46□□□□□ -0.9
HDAC4-207ENST00000461113 LYZP61626 148 aa9.46□□□□□ -0.9
HDAC4-207ENST00000461113 OR2F1Q13607 317 aa9.46□□□□□ -0.9
HDAC4-207ENST00000461113 HAPLN4Q86UW8 402 aa9.46□□□□□ -0.9
HDAC4-207ENST00000461113 TMEM147Q9BVK8 224 aa9.46□□□□□ -0.9
HDAC4-207ENST00000461113 ZMAT4Q9H898 229 aa9.46□□□□□ -0.9
HDAC4-207ENST00000461113 SMAD5-AS1Q9Y6J3 95 aa9.46□□□□□ -0.9
HDAC4-207ENST00000461113 CHEK1O14757 476 aa9.45□□□□□ -0.9
HDAC4-207ENST00000461113 CCNKO75909 580 aa9.45□□□□□ -0.9
HDAC4-207ENST00000461113 CXCL3P19876 107 aa9.45□□□□□ -0.9
HDAC4-207ENST00000461113 RPL11P62913 178 aaKnown RBP9.45□□□□□ -0.9
HDAC4-207ENST00000461113 ZNF90Q03938 601 aa9.45□□□□□ -0.9
HDAC4-207ENST00000461113 CYP2G1PQ6ZSU1 146 aa9.45□□□□□ -0.9
HDAC4-207ENST00000461113 OR11H7Q8NGC8 314 aa9.45□□□□□ -0.9
HDAC4-207ENST00000461113 RNF125Q96EQ8 232 aa9.45□□□□□ -0.9
HDAC4-207ENST00000461113 C11orf1Q9H5F2 150 aa9.45□□□□□ -0.9
HDAC4-207ENST00000461113 ZFAND3Q9H8U3 227 aa9.45□□□□□ -0.9
HDAC4-207ENST00000461113 OR5AC2Q9NZP5 309 aa9.45□□□□□ -0.9
HDAC4-207ENST00000461113 RNF24Q9Y225 148 aa9.45□□□□□ -0.9
HDAC4-207ENST00000461113 IGHV3-49A0A0A0MS15 119 aa9.44□□□□□ -0.9
HDAC4-207ENST00000461113 IGSF23A1L1A6 192 aa9.44□□□□□ -0.9
HDAC4-207ENST00000461113 CRYBB3P26998 211 aa9.44□□□□□ -0.9
HDAC4-207ENST00000461113 AP2S1P53680 142 aaPredicted RBP9.44□□□□□ -0.9
HDAC4-207ENST00000461113 EWSR1Q01844 656 aaKnown RBP eCLIP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms