RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 PEF1Q9UBV8 284 aaKnown RBP16.4■□□□□ 0.22
SHOX2-203ENST00000441443 POLEQ07864 2286 aa16.4■□□□□ 0.22
SHOX2-203ENST00000441443 SLC25A5P05141 298 aaKnown RBP16.4■□□□□ 0.22
SHOX2-203ENST00000441443 FNDC4Q9H6D8 234 aaPredicted RBP16.4■□□□□ 0.22
SHOX2-203ENST00000441443 TMEM238C9JI98 176 aa16.39■□□□□ 0.21
SHOX2-203ENST00000441443 FAM162BQ5T6X4 162 aa16.39■□□□□ 0.21
SHOX2-203ENST00000441443 DUX4L9Q6RFH8 374 aaPredicted RBP16.39■□□□□ 0.21
SHOX2-203ENST00000441443 RND1Q92730 232 aa16.39■□□□□ 0.21
SHOX2-203ENST00000441443 NAA38Q9BRA0 125 aaKnown RBP16.39■□□□□ 0.21
SHOX2-203ENST00000441443 IGLC1P0CG04 106 aa16.39■□□□□ 0.21
SHOX2-203ENST00000441443 INO80CQ6PI98 192 aaPredicted RBP16.39■□□□□ 0.21
SHOX2-203ENST00000441443 C9orf106Q8NAJ2 232 aa16.39■□□□□ 0.21
SHOX2-203ENST00000441443 FXYD5Q96DB9 178 aa16.39■□□□□ 0.21
SHOX2-203ENST00000441443 RPP21Q9H633 154 aaKnown RBP16.39■□□□□ 0.21
SHOX2-203ENST00000441443 DMXL2Q8TDJ6 3036 aa16.39■□□□□ 0.21
SHOX2-203ENST00000441443 DYSFO75923 2080 aa16.39■□□□□ 0.21
SHOX2-203ENST00000441443 MOSP00540 346 aa16.38■□□□□ 0.21
SHOX2-203ENST00000441443 REG1BP48304 166 aa16.38■□□□□ 0.21
SHOX2-203ENST00000441443 GCSAMQ8N6F7 178 aa16.38■□□□□ 0.21
SHOX2-203ENST00000441443 PPP1R35Q8TAP8 253 aa16.38■□□□□ 0.21
SHOX2-203ENST00000441443 FAM231BA6NCW3 169 aa16.38■□□□□ 0.21
SHOX2-203ENST00000441443 GAGE10A6NGK3 116 aa16.38■□□□□ 0.21
SHOX2-203ENST00000441443 H3BTX0 84 aa16.38■□□□□ 0.21
SHOX2-203ENST00000441443 TMUB1Q9BVT8 246 aa16.38■□□□□ 0.21
SHOX2-203ENST00000441443 ZNF257Q9Y2Q1 563 aa16.38■□□□□ 0.21
SHOX2-203ENST00000441443 PGPA6NDG6 321 aa16.37■□□□□ 0.21
SHOX2-203ENST00000441443 SRRM5B3KS81 715 aa16.37■□□□□ 0.21
SHOX2-203ENST00000441443 LIPFP07098 398 aa16.37■□□□□ 0.21
SHOX2-203ENST00000441443 ARF6P62330 175 aa16.37■□□□□ 0.21
SHOX2-203ENST00000441443 CR1LQ2VPA4 569 aa16.37■□□□□ 0.21
SHOX2-203ENST00000441443 NPIPB3Q92617 1050 aa16.37■□□□□ 0.21
SHOX2-203ENST00000441443 E7EUB6 86 aa16.37■□□□□ 0.21
SHOX2-203ENST00000441443 CECR9P0C854 216 aa16.37■□□□□ 0.21
SHOX2-203ENST00000441443 SAA1P0DJI8 122 aaPredicted RBP16.37■□□□□ 0.21
SHOX2-203ENST00000441443 TCTAP57738 103 aa16.37■□□□□ 0.21
SHOX2-203ENST00000441443 TMEM177Q53S58 311 aa16.37■□□□□ 0.21
SHOX2-203ENST00000441443 C2orf91Q6ZV80 131 aa16.37■□□□□ 0.21
SHOX2-203ENST00000441443 WFDC8Q8IUA0 241 aa16.37■□□□□ 0.21
SHOX2-203ENST00000441443 EPDR1Q9UM22 224 aa16.37■□□□□ 0.21
SHOX2-203ENST00000441443 TEX45Q8NA69 505 aa16.37■□□□□ 0.21
SHOX2-203ENST00000441443 H1FXQ92522 213 aaKnown RBP16.37■□□□□ 0.21
SHOX2-203ENST00000441443 NAV3Q8IVL0 2385 aa16.36■□□□□ 0.21
SHOX2-203ENST00000441443 P01737 135 aa16.36■□□□□ 0.21
SHOX2-203ENST00000441443 HLA-DRB1P01911 266 aa16.36■□□□□ 0.21
SHOX2-203ENST00000441443 PET117Q6UWS5 81 aa16.36■□□□□ 0.21
SHOX2-203ENST00000441443 A8MWL6 223 aa16.36■□□□□ 0.21
SHOX2-203ENST00000441443 CHEK1O14757 476 aa16.36■□□□□ 0.21
SHOX2-203ENST00000441443 LINC00305Q7Z4B0 112 aa16.36■□□□□ 0.21
SHOX2-203ENST00000441443 OR1L8Q8NGR8 309 aa16.36■□□□□ 0.21
SHOX2-203ENST00000441443 ADGRG4Q8IZF6 3080 aa16.35■□□□□ 0.21
SHOX2-203ENST00000441443 CT45A6P0DMU7 189 aa16.35■□□□□ 0.21
SHOX2-203ENST00000441443 CT45A5P0DMU8 189 aa16.35■□□□□ 0.21
SHOX2-203ENST00000441443 CT45A7P0DMV0 189 aa16.35■□□□□ 0.21
SHOX2-203ENST00000441443 POU2AF1Q16633 256 aa16.35■□□□□ 0.21
SHOX2-203ENST00000441443 PDPNQ86YL7 162 aa16.35■□□□□ 0.21
SHOX2-203ENST00000441443 ZNF714Q96N38 554 aa16.35■□□□□ 0.21
SHOX2-203ENST00000441443 GPR82Q96P67 336 aa16.35■□□□□ 0.21
SHOX2-203ENST00000441443 IGKV3-15P01624 115 aa16.35■□□□□ 0.21
SHOX2-203ENST00000441443 CGB3P0DN86 165 aa16.35■□□□□ 0.21
SHOX2-203ENST00000441443 CGB7P0DN87 165 aa16.35■□□□□ 0.21
SHOX2-203ENST00000441443 HTR1DP28221 377 aa16.35■□□□□ 0.21
SHOX2-203ENST00000441443 MOGAT3Q86VF5 341 aa16.35■□□□□ 0.21
SHOX2-203ENST00000441443 BPIFA4PQ86YQ2 179 aa16.35■□□□□ 0.21
SHOX2-203ENST00000441443 SMIM12Q96EX1 92 aa16.35■□□□□ 0.21
SHOX2-203ENST00000441443 ORM2P19652 201 aa16.35■□□□□ 0.21
SHOX2-203ENST00000441443 KIR2DL2P43627 348 aaPredicted RBP16.35■□□□□ 0.21
SHOX2-203ENST00000441443 Q6ZT83 130 aa16.35■□□□□ 0.21
SHOX2-203ENST00000441443 FER1L6-AS1Q8NA97 138 aa16.35■□□□□ 0.21
SHOX2-203ENST00000441443 MRPL36Q9P0J6 103 aaKnown RBP16.35■□□□□ 0.21
SHOX2-203ENST00000441443 KBTBD11-OT1A0A1B0GTJ5 212 aa16.34■□□□□ 0.21
SHOX2-203ENST00000441443 OR1B1Q8NGR6 318 aa16.34■□□□□ 0.21
SHOX2-203ENST00000441443 MS4A6AQ9H2W1 248 aa16.34■□□□□ 0.21
SHOX2-203ENST00000441443 SMG1Q96Q15 3661 aaKnown RBP16.34■□□□□ 0.21
SHOX2-203ENST00000441443 KLK10O43240 276 aa16.34■□□□□ 0.21
SHOX2-203ENST00000441443 NCR2O95944 276 aa16.34■□□□□ 0.21
SHOX2-203ENST00000441443 ADTRPQ96IZ2 230 aa16.34■□□□□ 0.21
SHOX2-203ENST00000441443 DSCAMO60469 2012 aa16.33■□□□□ 0.21
SHOX2-203ENST00000441443 DLL1O00548 723 aa16.33■□□□□ 0.21
SHOX2-203ENST00000441443 OR5AL1P0C617 328 aa16.33■□□□□ 0.21
SHOX2-203ENST00000441443 RBMXL3Q8N7X1 1067 aaKnown RBP16.33■□□□□ 0.21
SHOX2-203ENST00000441443 COX8AP10176 69 aa16.33■□□□□ 0.2
SHOX2-203ENST00000441443 MYCNOSP40205 109 aa16.33■□□□□ 0.2
SHOX2-203ENST00000441443 TMEM97Q5BJF2 176 aa16.33■□□□□ 0.2
SHOX2-203ENST00000441443 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.33■□□□□ 0.2
SHOX2-203ENST00000441443 OR1L4Q8NGR5 311 aa16.33■□□□□ 0.2
SHOX2-203ENST00000441443 MLST8Q9BVC4 326 aa16.33■□□□□ 0.2
SHOX2-203ENST00000441443 PRSS22Q9GZN4 317 aa16.33■□□□□ 0.2
SHOX2-203ENST00000441443 HSPB8Q9UJY1 196 aa16.33■□□□□ 0.2
SHOX2-203ENST00000441443 ZNF318Q5VUA4 2279 aa16.33■□□□□ 0.2
SHOX2-203ENST00000441443 FSTL3O95633 263 aa16.32■□□□□ 0.2
SHOX2-203ENST00000441443 MSMPQ1L6U9 139 aa16.32■□□□□ 0.2
SHOX2-203ENST00000441443 C10orf55Q5SWW7 151 aa16.32■□□□□ 0.2
SHOX2-203ENST00000441443 DEFB108BQ8NET1 73 aa16.32■□□□□ 0.2
SHOX2-203ENST00000441443 ITLN1Q8WWA0 313 aa16.32■□□□□ 0.2
SHOX2-203ENST00000441443 DAZAP1Q96EP5 407 aaKnown RBP16.32■□□□□ 0.2
SHOX2-203ENST00000441443 TRAV17A0A0B4J275 112 aa16.32■□□□□ 0.2
SHOX2-203ENST00000441443 RBPMS2Q6ZRY4 209 aaKnown RBP16.32■□□□□ 0.2
SHOX2-203ENST00000441443 Q71RC1 249 aaPredicted RBP16.32■□□□□ 0.2
SHOX2-203ENST00000441443 JMJD8Q96S16 334 aa16.32■□□□□ 0.2
SHOX2-203ENST00000441443 ZGRF1Q86YA3 2104 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms