RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 C4orf22Q6V702 233 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 OR4P4Q8NGL7 312 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 OR13C9Q8NGT0 318 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 ZNRF2Q8NHG8 242 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 ANGPTL6Q8NI99 470 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 CASTOR1Q8WTX7 329 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 CACNG8Q8WXS5 425 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 PPP1R14BQ96C90 147 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 PPCDCQ96CD2 204 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 ADTRPQ96IZ2 230 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 TEX37Q96LM6 180 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 ZNF714Q96N38 554 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 TMEM133Q9H2Q1 129 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 CACYBPQ9HB71 228 aaKnown RBP1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 PARP11Q9NR21 331 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 SDHAF2Q9NX18 166 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 ZNF586Q9NXT0 402 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 TAS2R7Q9NYW3 318 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 ANXA10Q9UJ72 324 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 PYCARDQ9ULZ3 195 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 ERGIC3Q9Y282 383 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 AP3M1Q9Y2T2 418 aa1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 CARHSP1Q9Y2V2 147 aaKnown RBP1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 SYNE2Q8WXH0 6885 aaKnown RBP1.54□□□□□ -2.16
HMGB3P12-201ENST00000438745 LOC389332A0A1B0GUA5 103 aa1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 TCAPO15273 167 aa1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 ENTPD6O75354 484 aa1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 SC5DO75845 299 aa1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 CST2P09228 141 aa1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 MIFP14174 115 aa1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 SLC18A1P54219 525 aa1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 SPCS2Q15005 226 aa1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 USF2Q15853 346 aaPredicted RBP1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 IMPG1Q17R60 797 aa1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 DEFB114Q30KQ6 69 aa1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 C12orf74Q32Q52 190 aa1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 IDNKQ5T6J7 187 aa1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 Q6ZRU5 148 aa1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 TCF24Q7RTU0 167 aa1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 TCF23Q7RTU1 214 aa1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 TRAPPC6BQ86SZ2 158 aa1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 C4orf33Q8N1A6 199 aa1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 TCTEX1D1Q8N7M0 179 aa1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 OR5AK3PQ8NH89 298 aa1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 OR5P2Q8WZ92 322 aa1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 SLC35G5Q96KT7 338 aa1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 IGF2BP2-AS1Q96M15 143 aa1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 HSPB9Q9BQS6 159 aa1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 THTPAQ9BU02 230 aa1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 WDR55Q9H6Y2 383 aaPredicted RBP1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 POPDC3Q9HBV1 291 aa1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 C12orf4Q9NQ89 552 aa1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 CHTOPQ9Y3Y2 248 aaKnown RBP1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 AMMECR1Q9Y4X0 333 aaPredicted RBP1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 POLR3HQ9Y535 204 aaPredicted RBP1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 ICOSQ9Y6W8 199 aa1.53□□□□□ -2.16
HMGB3P12-201ENST00000438745 IGKV1OR2-108A0A075B7D4 117 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 A0A087WTM6 91 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 EXOC1LA0A1B0GW35 172 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 hADV38S2A0JD32 116 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 OR6C6A6NF89 314 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 CD300LBA8K4G0 201 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 BUB1B-PAK6H3BSN5 160 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 PLPP3O14495 311 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 ISLRO14498 428 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 POLR3GO15318 223 aaPredicted RBP1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 COX7A2P2O60397 106 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 MLNP12872 115 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 M6PRP20645 277 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 BGNP21810 368 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 S100A2P29034 98 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 NUP62P37198 522 aaPredicted RBP1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 KRTAP12-4P60329 112 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 GPR176Q14439 515 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 HLA-DRB5Q30154 266 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 UBE2NLQ5JXB2 153 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 SPANXN3Q5MJ09 141 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 C10orf128Q5T292 105 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 MRPL2Q5T653 305 aaKnown RBP1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 FAM27BQ5VT28 67 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 AMMECR1LQ6DCA0 310 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 Q8NAQ8 132 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 ZNF555Q8NEP9 628 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 OR1M1Q8NGA1 313 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 OR6N2Q8NGY6 317 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 OR2T10Q8NGZ9 312 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 OR5J2Q8NH18 312 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 MITD1Q8WV92 249 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 C1orf54Q8WWF1 131 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 RBP7Q96R05 134 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 COPS4Q9BT78 406 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 HINT2Q9BX68 163 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 ZNF436Q9C0F3 470 aaPredicted RBP1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 VCX3AQ9NNX9 186 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 ACOT13Q9NPJ3 140 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 ANGPT4Q9Y264 503 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 POLR1DQ9Y2S0 133 aa1.52□□□□□ -2.17
HMGB3P12-201ENST00000438745 SSPOA2VEC9 5147 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 TRAV3A0A0B4J244 114 aa1.51□□□□□ -2.17
HMGB3P12-201ENST00000438745 A0A0B4J2C4 111 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms