RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 PRDM13Q9H4Q3 707 aa11.9□□□□□ -0.5
ACTB-204ENST00000425660 C11orf94C9JXX5 98 aa11.89□□□□□ -0.51
ACTB-204ENST00000425660 YPEL3P61236 119 aaPredicted RBP11.89□□□□□ -0.51
ACTB-204ENST00000425660 TIGITQ495A1 244 aa11.89□□□□□ -0.51
ACTB-204ENST00000425660 OR5R1Q8NH85 324 aa11.89□□□□□ -0.51
ACTB-204ENST00000425660 SLC25A2Q9BXI2 301 aa11.89□□□□□ -0.51
ACTB-204ENST00000425660 TMEM167BQ9NRX6 74 aa11.89□□□□□ -0.51
ACTB-204ENST00000425660 ZNF355PQ9NSJ1 428 aa11.89□□□□□ -0.51
ACTB-204ENST00000425660 DOK5Q9P104 306 aa11.89□□□□□ -0.51
ACTB-204ENST00000425660 FBXL7Q9UJT9 491 aa11.89□□□□□ -0.51
ACTB-204ENST00000425660 TRAV41A0A0B4J266 112 aa11.88□□□□□ -0.51
ACTB-204ENST00000425660 HYPMO75409 117 aa11.88□□□□□ -0.51
ACTB-204ENST00000425660 BRI3O95415 125 aa11.88□□□□□ -0.51
ACTB-204ENST00000425660 TOMM40O96008 361 aa11.88□□□□□ -0.51
ACTB-204ENST00000425660 IGHV4-59P01825 116 aa11.88□□□□□ -0.51
ACTB-204ENST00000425660 RD3LP0DJH9 198 aa11.88□□□□□ -0.51
ACTB-204ENST00000425660 ORM2P19652 201 aa11.88□□□□□ -0.51
ACTB-204ENST00000425660 LINC00305Q7Z4B0 112 aa11.88□□□□□ -0.51
ACTB-204ENST00000425660 NECAP1Q8NC96 275 aa11.88□□□□□ -0.51
ACTB-204ENST00000425660 UHRF2Q96PU4 802 aa11.88□□□□□ -0.51
ACTB-204ENST00000425660 ZNF580Q9UK33 172 aa11.88□□□□□ -0.51
ACTB-204ENST00000425660 MXRA5Q9NR99 2828 aa11.88□□□□□ -0.51
ACTB-204ENST00000425660 PDE6DO43924 150 aa11.88□□□□□ -0.51
ACTB-204ENST00000425660 GNG7O60262 68 aa11.88□□□□□ -0.51
ACTB-204ENST00000425660 OR51G1Q8NGK1 321 aa11.88□□□□□ -0.51
ACTB-204ENST00000425660 OR1B1Q8NGR6 318 aa11.88□□□□□ -0.51
ACTB-204ENST00000425660 AKAP9Q99996 3911 aa11.87□□□□□ -0.51
ACTB-204ENST00000425660 SETXQ7Z333 2677 aaKnown RBP11.87□□□□□ -0.51
ACTB-204ENST00000425660 FAM74A7A6NL05 159 aa11.87□□□□□ -0.51
ACTB-204ENST00000425660 H3BQ15 152 aa11.87□□□□□ -0.51
ACTB-204ENST00000425660 OR7C2O60412 319 aa11.87□□□□□ -0.51
ACTB-204ENST00000425660 CEBPGP53567 150 aa11.87□□□□□ -0.51
ACTB-204ENST00000425660 BLCAPP62952 87 aa11.87□□□□□ -0.51
ACTB-204ENST00000425660 RHOGP84095 191 aa11.87□□□□□ -0.51
ACTB-204ENST00000425660 BTN1A1Q13410 526 aa11.87□□□□□ -0.51
ACTB-204ENST00000425660 C15orf32Q32M92 178 aa11.87□□□□□ -0.51
ACTB-204ENST00000425660 Q6YL49 198 aa11.87□□□□□ -0.51
ACTB-204ENST00000425660 OR4F5Q8NH21 305 aa11.87□□□□□ -0.51
ACTB-204ENST00000425660 ZNF502Q8TBZ5 544 aa11.87□□□□□ -0.51
ACTB-204ENST00000425660 OR4F4Q96R69 305 aa11.87□□□□□ -0.51
ACTB-204ENST00000425660 NIPSNAP3BQ9BS92 247 aa11.87□□□□□ -0.51
ACTB-204ENST00000425660 MRPL27Q9P0M9 148 aaKnown RBP11.87□□□□□ -0.51
ACTB-204ENST00000425660 TRAV5A0A0B4J249 113 aa11.86□□□□□ -0.51
ACTB-204ENST00000425660 OR2C1O95371 312 aa11.86□□□□□ -0.51
ACTB-204ENST00000425660 PPIFP30405 207 aaKnown RBP11.86□□□□□ -0.51
ACTB-204ENST00000425660 ATP5G3P48201 142 aa11.86□□□□□ -0.51
ACTB-204ENST00000425660 UBE2G2P60604 165 aa11.86□□□□□ -0.51
ACTB-204ENST00000425660 TEX29Q8N6K0 151 aa11.86□□□□□ -0.51
ACTB-204ENST00000425660 ZNF491Q8N8L2 437 aa11.86□□□□□ -0.51
ACTB-204ENST00000425660 STXBP6Q8NFX7 210 aa11.86□□□□□ -0.51
ACTB-204ENST00000425660 OR5AU1Q8NGC0 362 aa11.86□□□□□ -0.51
ACTB-204ENST00000425660 YTHDF2Q9Y5A9 579 aaKnown RBP11.86□□□□□ -0.51
ACTB-204ENST00000425660 S4R3C0 116 aa11.86□□□□□ -0.51
ACTB-204ENST00000425660 CTSGP08311 255 aa11.86□□□□□ -0.51
ACTB-204ENST00000425660 RHEBQ15382 184 aa11.86□□□□□ -0.51
ACTB-204ENST00000425660 Q56UQ5 140 aa11.86□□□□□ -0.51
ACTB-204ENST00000425660 AWAT1Q58HT5 328 aa11.86□□□□□ -0.51
ACTB-204ENST00000425660 CST9LP1Q5W188 147 aa11.86□□□□□ -0.51
ACTB-204ENST00000425660 ATP6V0BQ99437 205 aa11.86□□□□□ -0.51
ACTB-204ENST00000425660 PUS1Q9Y606 427 aaKnown RBP eCLIP11.86□□□□□ -0.513e-13■□□□□ 8.3
ACTB-204ENST00000425660 WI2-2373I1.2A0A1W2PRP0 233 aa11.85□□□□□ -0.51
ACTB-204ENST00000425660 CYSRT1A8MQ03 144 aa11.85□□□□□ -0.51
ACTB-204ENST00000425660 H3BUA1 57 aa11.85□□□□□ -0.51
ACTB-204ENST00000425660 DNASE2O00115 360 aaPredicted RBP11.85□□□□□ -0.51
ACTB-204ENST00000425660 SCGB2A1O75556 95 aa11.85□□□□□ -0.51
ACTB-204ENST00000425660 NPPCP23582 126 aa11.85□□□□□ -0.51
ACTB-204ENST00000425660 FAM74A3Q4VXF1 159 aa11.85□□□□□ -0.51
ACTB-204ENST00000425660 C9orf152Q5JTZ5 239 aa11.85□□□□□ -0.51
ACTB-204ENST00000425660 VPREB3Q9UKI3 123 aa11.85□□□□□ -0.51
ACTB-204ENST00000425660 HIGD1AQ9Y241 93 aa11.85□□□□□ -0.51
ACTB-204ENST00000425660 A0A1W2PRE2 83 aa11.84□□□□□ -0.51
ACTB-204ENST00000425660 FAM223BA6NKX1 122 aa11.84□□□□□ -0.51
ACTB-204ENST00000425660 F6UZH7 168 aa11.84□□□□□ -0.51
ACTB-204ENST00000425660 AP4M1O00189 453 aa11.84□□□□□ -0.51
ACTB-204ENST00000425660 LYZP61626 148 aa11.84□□□□□ -0.51
ACTB-204ENST00000425660 PNRC1Q12796 327 aaPredicted RBP11.84□□□□□ -0.51
ACTB-204ENST00000425660 Q6ZS46 218 aa11.84□□□□□ -0.51
ACTB-204ENST00000425660 FAM223AQ8IWN6 122 aa11.84□□□□□ -0.51
ACTB-204ENST00000425660 FXYD5Q96DB9 178 aa11.84□□□□□ -0.51
ACTB-204ENST00000425660 RNF125Q96EQ8 232 aa11.84□□□□□ -0.51
ACTB-204ENST00000425660 PAXXQ9BUH6 204 aa11.84□□□□□ -0.51
ACTB-204ENST00000425660 PARLQ9H300 379 aa11.84□□□□□ -0.51
ACTB-204ENST00000425660 OR51M1Q9H341 326 aa11.84□□□□□ -0.51
ACTB-204ENST00000425660 GAR1Q9NY12 217 aaKnown RBP11.84□□□□□ -0.51
ACTB-204ENST00000425660 FLNAP21333 2647 aaKnown RBP11.84□□□□□ -0.51
ACTB-204ENST00000425660 C7orf77A4D0Y5 90 aa11.83□□□□□ -0.51
ACTB-204ENST00000425660 OR2T8A6NH00 312 aa11.83□□□□□ -0.51
ACTB-204ENST00000425660 OR10J4P0C629 311 aa11.83□□□□□ -0.51
ACTB-204ENST00000425660 ADMP35318 185 aa11.83□□□□□ -0.51
ACTB-204ENST00000425660 UBE2L3P68036 154 aaKnown RBP11.83□□□□□ -0.51
ACTB-204ENST00000425660 Q8WTZ3 238 aa11.83□□□□□ -0.51
ACTB-204ENST00000425660 TVP23CQ96ET8 276 aa11.83□□□□□ -0.51
ACTB-204ENST00000425660 CCDC140Q96MF4 163 aa11.83□□□□□ -0.51
ACTB-204ENST00000425660 SLC25A39Q9BZJ4 359 aaPredicted RBP11.83□□□□□ -0.51
ACTB-204ENST00000425660 TRBV7-1A0A0A6YYK4 115 aa11.83□□□□□ -0.52
ACTB-204ENST00000425660 ZNF727A8MUV8 499 aa11.83□□□□□ -0.52
ACTB-204ENST00000425660 M0R036 132 aa11.83□□□□□ -0.52
ACTB-204ENST00000425660 IGHV3-23P01764 117 aa11.83□□□□□ -0.52
ACTB-204ENST00000425660 IL4P05112 153 aa11.83□□□□□ -0.52
ACTB-204ENST00000425660 CFHR3Q02985 330 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms