RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 SLC25A4P12235 298 aa6.91□□□□□ -1.3
NUP50-205ENST00000419387 INPP1P49441 399 aa6.91□□□□□ -1.3
NUP50-205ENST00000419387 UBE2MP61081 183 aaKnown RBP6.91□□□□□ -1.3
NUP50-205ENST00000419387 DHRS2Q13268 280 aa6.91□□□□□ -1.3
NUP50-205ENST00000419387 LEMD1Q68G75 181 aa6.91□□□□□ -1.3
NUP50-205ENST00000419387 NRARPQ7Z6K4 114 aa6.91□□□□□ -1.3
NUP50-205ENST00000419387 OR1S2Q8NGQ3 325 aa6.91□□□□□ -1.3
NUP50-205ENST00000419387 OR11H2Q8NH07 326 aa6.91□□□□□ -1.3
NUP50-205ENST00000419387 RNASEH2CQ8TDP1 164 aaKnown RBP6.91□□□□□ -1.3
NUP50-205ENST00000419387 Q8WTZ3 238 aa6.91□□□□□ -1.3
NUP50-205ENST00000419387 PHLDA1Q8WV24 401 aaPredicted RBP6.91□□□□□ -1.3
NUP50-205ENST00000419387 IL22RA2Q969J5 263 aa6.91□□□□□ -1.3
NUP50-205ENST00000419387 NARS2Q96I59 477 aaKnown RBP6.91□□□□□ -1.3
NUP50-205ENST00000419387 KRTAP4-12Q9BQ66 201 aa6.91□□□□□ -1.3
NUP50-205ENST00000419387 CACFD1Q9UGQ2 172 aa6.91□□□□□ -1.3
NUP50-205ENST00000419387 TRAV6A0A075B6T7 132 aa6.9□□□□□ -1.3
NUP50-205ENST00000419387 A0A0B4J2A0 478 aa6.9□□□□□ -1.3
NUP50-205ENST00000419387 CENPXA8MT69 81 aa6.9□□□□□ -1.3
NUP50-205ENST00000419387 K7EQG2 157 aa6.9□□□□□ -1.3
NUP50-205ENST00000419387 IGLC1P0CG04 106 aa6.9□□□□□ -1.3
NUP50-205ENST00000419387 SULT1A3P0DMM9 295 aa6.9□□□□□ -1.3
NUP50-205ENST00000419387 SULT1A4P0DMN0 295 aa6.9□□□□□ -1.3
NUP50-205ENST00000419387 P2RY1P47900 373 aa6.9□□□□□ -1.3
NUP50-205ENST00000419387 RND2P52198 227 aa6.9□□□□□ -1.3
NUP50-205ENST00000419387 YPEL3P61236 119 aaPredicted RBP6.9□□□□□ -1.3
NUP50-205ENST00000419387 ETFRF1Q6IPR1 90 aa6.9□□□□□ -1.3
NUP50-205ENST00000419387 PRSS54Q6PEW0 395 aa6.9□□□□□ -1.3
NUP50-205ENST00000419387 NOXA1Q86UR1 476 aa6.9□□□□□ -1.3
NUP50-205ENST00000419387 STHQ8IWL8 128 aa6.9□□□□□ -1.3
NUP50-205ENST00000419387 SLC24A4Q8NFF2 622 aa6.9□□□□□ -1.3
NUP50-205ENST00000419387 STXBP6Q8NFX7 210 aa6.9□□□□□ -1.3
NUP50-205ENST00000419387 GRAMD2BQ96HH9 432 aa6.9□□□□□ -1.3
NUP50-205ENST00000419387 C20orf85Q9H1P6 137 aa6.9□□□□□ -1.3
NUP50-205ENST00000419387 C11orf68Q9H3H3 251 aaKnown RBP6.9□□□□□ -1.3
NUP50-205ENST00000419387 NUDT15Q9NV35 164 aa6.9□□□□□ -1.3
NUP50-205ENST00000419387 SHPKQ9UHJ6 478 aa6.9□□□□□ -1.3
NUP50-205ENST00000419387 U3KQE9 123 aa6.9□□□□□ -1.3
NUP50-205ENST00000419387 NXPH3O95157 252 aa6.89□□□□□ -1.31
NUP50-205ENST00000419387 HNRNPCP07910 306 aaKnown RBP eCLIP6.89□□□□□ -1.31
NUP50-205ENST00000419387 NPY1RP25929 384 aa6.89□□□□□ -1.31
NUP50-205ENST00000419387 OR10J1P30954 320 aa6.89□□□□□ -1.31
NUP50-205ENST00000419387 EIF2B2P49770 351 aaKnown RBP6.89□□□□□ -1.31
NUP50-205ENST00000419387 AP2S1P53680 142 aaPredicted RBP6.89□□□□□ -1.31
NUP50-205ENST00000419387 C16orf54Q6UWD8 224 aa6.89□□□□□ -1.31
NUP50-205ENST00000419387 LGI3Q8N145 548 aa6.89□□□□□ -1.31
NUP50-205ENST00000419387 C11orf45Q8TAV5 145 aa6.89□□□□□ -1.31
NUP50-205ENST00000419387 DCANP1Q8TF63 244 aa6.89□□□□□ -1.31
NUP50-205ENST00000419387 MITD1Q8WV92 249 aa6.89□□□□□ -1.31
NUP50-205ENST00000419387 TMEM170AQ8WVE7 144 aa6.89□□□□□ -1.31
NUP50-205ENST00000419387 NPIPB3Q92617 1050 aa6.89□□□□□ -1.31
NUP50-205ENST00000419387 MARVELD1Q9BSK0 173 aa6.89□□□□□ -1.31
NUP50-205ENST00000419387 U3KQ87 197 aa6.89□□□□□ -1.31
NUP50-205ENST00000419387 FAM240BA0A1B0GVZ2 78 aa6.88□□□□□ -1.31
NUP50-205ENST00000419387 HELTA6NFD8 242 aa6.88□□□□□ -1.31
NUP50-205ENST00000419387 KNCNA6PVL3 124 aa6.88□□□□□ -1.31
NUP50-205ENST00000419387 ADAP1O75689 374 aa6.88□□□□□ -1.31
NUP50-205ENST00000419387 IFNA10P01566 189 aa6.88□□□□□ -1.31
NUP50-205ENST00000419387 IFNA4P05014 189 aa6.88□□□□□ -1.31
NUP50-205ENST00000419387 H2AFB2P0C5Z0 115 aa6.88□□□□□ -1.31
NUP50-205ENST00000419387 ZNF688P0C7X2 276 aa6.88□□□□□ -1.31
NUP50-205ENST00000419387 VAMP1P23763 118 aa6.88□□□□□ -1.31
NUP50-205ENST00000419387 NANOS2P60321 138 aaKnown RBP6.88□□□□□ -1.31
NUP50-205ENST00000419387 SMCO1Q147U7 214 aa6.88□□□□□ -1.31
NUP50-205ENST00000419387 TMEM41BQ5BJD5 291 aa6.88□□□□□ -1.31
NUP50-205ENST00000419387 MORN3Q6PF18 240 aaPredicted RBP6.88□□□□□ -1.31
NUP50-205ENST00000419387 TRPT1Q86TN4 253 aaKnown RBP6.88□□□□□ -1.31
NUP50-205ENST00000419387 GLMPQ8WWB7 406 aa6.88□□□□□ -1.31
NUP50-205ENST00000419387 SEC22CQ9BRL7 303 aa6.88□□□□□ -1.31
NUP50-205ENST00000419387 MFFQ9GZY8 342 aa6.88□□□□□ -1.31
NUP50-205ENST00000419387 FBXL17Q9UF56 701 aa6.88□□□□□ -1.31
NUP50-205ENST00000419387 DUXBA0A1W2PPF3 345 aa6.87□□□□□ -1.31
NUP50-205ENST00000419387 DEFB4AO15263 64 aa6.87□□□□□ -1.31
NUP50-205ENST00000419387 TOMM40O96008 361 aa6.87□□□□□ -1.31
NUP50-205ENST00000419387 IL4P05112 153 aa6.87□□□□□ -1.31
NUP50-205ENST00000419387 IL5P05113 134 aa6.87□□□□□ -1.31
NUP50-205ENST00000419387 GIG44P09565 113 aaPredicted RBP6.87□□□□□ -1.31
NUP50-205ENST00000419387 RD3LP0DJH9 198 aa6.87□□□□□ -1.31
NUP50-205ENST00000419387 SPP1P10451 314 aa6.87□□□□□ -1.31
NUP50-205ENST00000419387 SLC25A6P12236 298 aa6.87□□□□□ -1.31
NUP50-205ENST00000419387 ANXA3P12429 323 aa6.87□□□□□ -1.31
NUP50-205ENST00000419387 TNP2Q05952 138 aa6.87□□□□□ -1.31
NUP50-205ENST00000419387 IL15RAQ13261 267 aa6.87□□□□□ -1.31
NUP50-205ENST00000419387 USF2Q15853 346 aaPredicted RBP6.87□□□□□ -1.31
NUP50-205ENST00000419387 GGNBP1Q5YKI7 109 aa6.87□□□□□ -1.31
NUP50-205ENST00000419387 MZT2BQ6NZ67 158 aa6.87□□□□□ -1.31
NUP50-205ENST00000419387 DTD1Q8TEA8 209 aa6.87□□□□□ -1.31
NUP50-205ENST00000419387 ACY3Q96HD9 319 aa6.87□□□□□ -1.31
NUP50-205ENST00000419387 RAB40CQ96S21 281 aa6.87□□□□□ -1.31
NUP50-205ENST00000419387 RBKSQ9H477 322 aa6.87□□□□□ -1.31
NUP50-205ENST00000419387 HSPB7Q9UBY9 170 aa6.87□□□□□ -1.31
NUP50-205ENST00000419387 TMED3Q9Y3Q3 217 aa6.87□□□□□ -1.31
NUP50-205ENST00000419387 KMT2AQ03164 3969 aa6.86□□□□□ -1.31
NUP50-205ENST00000419387 PIGBOS1A0A0B4J2F0 54 aa6.86□□□□□ -1.31
NUP50-205ENST00000419387 BUB3O43684 328 aa6.86□□□□□ -1.31
NUP50-205ENST00000419387 HOXB5P09067 269 aa6.86□□□□□ -1.31
NUP50-205ENST00000419387 PSG1P11464 419 aa6.86□□□□□ -1.31
NUP50-205ENST00000419387 ATP5IP56385 69 aaPredicted RBP6.86□□□□□ -1.31
NUP50-205ENST00000419387 SRPXP78539 464 aa6.86□□□□□ -1.31
NUP50-205ENST00000419387 ID3Q02535 119 aa6.86□□□□□ -1.31
NUP50-205ENST00000419387 PSMG4Q5JS54 123 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms