RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 J3QLI3 93 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 SOX15O60248 233 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 NDUFA3O95167 84 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 OR2C1O95371 312 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 IFNA1P01562 189 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 MBP02144 154 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 REG1AP05451 166 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 FBP1P09467 338 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 APELAP0DMC3 54 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 OR13C7P0DN81 318 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 RNASE2P10153 161 aaKnown RBP2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 DEFA4P12838 97 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 CD24P25063 80 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 PAX6P26367 422 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 ARL3P36405 182 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 SERF2P84101 59 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 PAX8Q06710 450 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 LOXL1Q08397 574 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 PJVKQ0ZLH3 352 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 AANATQ16613 207 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 VWC2Q2TAL6 325 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 ACOT6Q3I5F7 207 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 C2orf83Q53S99 150 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 TMEM41BQ5BJD5 291 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 LDLRAD2Q5SZI1 272 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 ETFRF1Q6IPR1 90 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 BTNL8Q6UX41 500 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 DPPA3Q6W0C5 159 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 BRD3OSQ6XYD6 125 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 IQCF2Q8IXL9 164 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 COMMD1Q8N668 190 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 OR10W1Q8NGF6 305 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 RNASEH2CQ8TDP1 164 aaKnown RBP2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 SRSF12Q8WXF0 261 aaKnown RBP2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 ARPC1AQ92747 370 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 MARC2Q969Z3 335 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 VGLL1Q99990 258 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 RASL11BQ9BPW5 248 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 PBDC1Q9BVG4 233 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 GGACTQ9BVM4 153 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 GGTLC1Q9BX51 225 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 NPCDR1Q9BY65 106 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 REG4Q9BYZ8 158 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 NPVFQ9HCQ7 196 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 TREM1Q9NP99 234 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 NDUFA4L2Q9NRX3 87 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 MED9Q9NWA0 146 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 WDR83OSQ9Y284 106 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 MOB4Q9Y3A3 225 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 PYGO1Q9Y3Y4 419 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 PXMP4Q9Y6I8 212 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 CR1P17927 2039 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 RP1L1Q8IWN7 2480 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 BSNQ9UPA5 3926 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 A0A0U1RQK1 487 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 CTXND1A0A1B0GTU2 59 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 A0A1W2PPV4 95 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 IGLC7A0M8Q6 106 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 RAB19A4D1S5 217 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 MAP1LC3B2A6NCE7 125 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 MFSD2BA6NFX1 497 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 ZFP92A6NM28 416 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 KRBOX1C9JBD0 128 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 FNDC10F2Z333 226 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 INS-IGF2F8WCM5 200 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 H7C423 109 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 AGPAT2O15120 278 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 SCGB2A1O75556 95 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 MT-CO2P00403 227 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 TGFAP01135 160 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 CRYGBP07316 175 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 AREGP15514 252 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 M6PRP20645 277 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 ZP3P21754 424 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 CDC34P49427 236 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 BPIFB3P59826 476 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 WT1-ASQ06250 92 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 FXYD3Q14802 87 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 PEA15Q15121 130 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 C5orf64Q2M2E5 130 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 C9orf152Q5JTZ5 239 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 ADAMTSL4-AS1Q5T5F5 129 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 UQCC3Q6UW78 93 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 DYNAPQ8N1N2 210 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 TEX29Q8N6K0 151 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 NPBQ8NG41 125 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 OR10G4Q8NGN3 311 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 OR10G9Q8NGN4 311 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 OR10G7Q8NGN6 311 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 OR1L6Q8NGR2 347 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 C17orf50Q8WW18 174 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 SSMEM1Q8WWF3 244 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 ACY3Q96HD9 319 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 PRAC1Q96KF2 57 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 P2RX4Q99571 388 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 SRSF8Q9BRL6 282 aaKnown RBP2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 MCRIP2Q9BUT9 160 aaKnown RBP2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 ACTR3CQ9C0K3 210 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 MAP1LC3BQ9GZQ8 125 aa2.95□□□□□ -1.94
HMGB3P20-201ENST00000417997 EIF5A2Q9GZV4 153 aaKnown RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms