RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 NTF4P34130 210 aa10.55□□□□□ -0.72
SCAF8-203ENST00000417268 ZNF257Q9Y2Q1 563 aa10.55□□□□□ -0.72
SCAF8-203ENST00000417268 POLR3KQ9Y2Y1 108 aaPredicted RBP10.55□□□□□ -0.72
SCAF8-203ENST00000417268 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.55□□□□□ -0.727e-7■■■■□ 21.2
SCAF8-203ENST00000417268 TYMSP04818 313 aa10.55□□□□□ -0.72
SCAF8-203ENST00000417268 HIST1H1AQ02539 215 aaPredicted RBP10.55□□□□□ -0.72
SCAF8-203ENST00000417268 NMSQ5H8A3 153 aa10.55□□□□□ -0.72
SCAF8-203ENST00000417268 WFDC3Q8IUB2 231 aa10.55□□□□□ -0.72
SCAF8-203ENST00000417268 CD177Q8N6Q3 437 aa10.55□□□□□ -0.72
SCAF8-203ENST00000417268 IFI27L2Q9H2X8 130 aa10.55□□□□□ -0.72
SCAF8-203ENST00000417268 SMAGPQ0VAQ4 97 aa10.54□□□□□ -0.72
SCAF8-203ENST00000417268 MRPL52Q86TS9 123 aaKnown RBP10.54□□□□□ -0.72
SCAF8-203ENST00000417268 MRPL16Q9NX20 251 aaKnown RBP10.54□□□□□ -0.72
SCAF8-203ENST00000417268 WNK2Q9Y3S1 2297 aa10.54□□□□□ -0.72
SCAF8-203ENST00000417268 ALPK3Q96L96 1907 aa10.54□□□□□ -0.72
SCAF8-203ENST00000417268 COX6CP09669 75 aa10.54□□□□□ -0.72
SCAF8-203ENST00000417268 NUDT10Q8NFP7 164 aa10.54□□□□□ -0.72
SCAF8-203ENST00000417268 EEF1AKMT3Q96AZ1 226 aa10.54□□□□□ -0.72
SCAF8-203ENST00000417268 ST20Q9HBF5 79 aa10.54□□□□□ -0.72
SCAF8-203ENST00000417268 WDR83OSQ9Y284 106 aa10.54□□□□□ -0.72
SCAF8-203ENST00000417268 SOX21Q9Y651 276 aaPredicted RBP10.54□□□□□ -0.72
SCAF8-203ENST00000417268 IGLV1-44P01699 117 aa10.54□□□□□ -0.72
SCAF8-203ENST00000417268 ORAOV1Q8WV07 137 aa10.54□□□□□ -0.72
SCAF8-203ENST00000417268 PTPRSQ13332 1948 aa10.54□□□□□ -0.72
SCAF8-203ENST00000417268 C3orf79P0CE67 100 aa10.54□□□□□ -0.72
SCAF8-203ENST00000417268 ANOS1P23352 680 aa10.54□□□□□ -0.72
SCAF8-203ENST00000417268 RBPMS2Q6ZRY4 209 aaKnown RBP10.54□□□□□ -0.72
SCAF8-203ENST00000417268 SIGMAR1Q99720 223 aa10.54□□□□□ -0.72
SCAF8-203ENST00000417268 DOCK11Q5JSL3 2073 aa10.54□□□□□ -0.72
SCAF8-203ENST00000417268 SLC25A16P16260 332 aa10.53□□□□□ -0.72
SCAF8-203ENST00000417268 RPS20P60866 119 aaKnown RBP10.53□□□□□ -0.72
SCAF8-203ENST00000417268 RNASEH2CQ8TDP1 164 aaKnown RBP10.53□□□□□ -0.72
SCAF8-203ENST00000417268 AGMATQ9BSE5 352 aa10.53□□□□□ -0.72
SCAF8-203ENST00000417268 MUC21A0A0G2JKD1 596 aa10.53□□□□□ -0.72
SCAF8-203ENST00000417268 MUC21A0A140T8X8 626 aa10.53□□□□□ -0.72
SCAF8-203ENST00000417268 NBR2O15453 112 aa10.53□□□□□ -0.72
SCAF8-203ENST00000417268 MPV17L2Q567V2 206 aa10.53□□□□□ -0.72
SCAF8-203ENST00000417268 MUC21Q5SSG8 566 aa10.53□□□□□ -0.72
SCAF8-203ENST00000417268 TPTE2P1Q5T6R2 138 aa10.53□□□□□ -0.72
SCAF8-203ENST00000417268 TMEM155Q4W5P6 130 aa10.53□□□□□ -0.72
SCAF8-203ENST00000417268 TMEM78Q5T7P6 136 aa10.53□□□□□ -0.72
SCAF8-203ENST00000417268 JMJD8Q96S16 334 aa10.53□□□□□ -0.72
SCAF8-203ENST00000417268 NDUFS8O00217 210 aa10.53□□□□□ -0.72
SCAF8-203ENST00000417268 PRSS2P07478 247 aa10.53□□□□□ -0.72
SCAF8-203ENST00000417268 TMEM200BQ69YZ2 307 aa10.53□□□□□ -0.72
SCAF8-203ENST00000417268 ARPC1AQ92747 370 aa10.53□□□□□ -0.72
SCAF8-203ENST00000417268 GPR82Q96P67 336 aa10.53□□□□□ -0.72
SCAF8-203ENST00000417268 NAA38Q9BRA0 125 aaKnown RBP10.53□□□□□ -0.72
SCAF8-203ENST00000417268 NPFFR1Q9GZQ6 430 aa10.53□□□□□ -0.72
SCAF8-203ENST00000417268 A0A0G2JLM5 398 aa10.52□□□□□ -0.72
SCAF8-203ENST00000417268 CGB1A6NKQ9 187 aa10.52□□□□□ -0.72
SCAF8-203ENST00000417268 TRGV3P03979 118 aa10.52□□□□□ -0.72
SCAF8-203ENST00000417268 EFNB3Q15768 340 aa10.52□□□□□ -0.72
SCAF8-203ENST00000417268 ASCL4Q6XD76 172 aa10.52□□□□□ -0.72
SCAF8-203ENST00000417268 PPP1R27Q86WC6 154 aa10.52□□□□□ -0.72
SCAF8-203ENST00000417268 NHP2Q9NX24 153 aaKnown RBP10.52□□□□□ -0.72
SCAF8-203ENST00000417268 NOTCH2Q04721 2471 aa10.52□□□□□ -0.72
SCAF8-203ENST00000417268 COL8A2P25067 703 aa10.52□□□□□ -0.73
SCAF8-203ENST00000417268 TSPOP30536 169 aa10.52□□□□□ -0.73
SCAF8-203ENST00000417268 RELQ04864 619 aaPredicted RBP10.52□□□□□ -0.73
SCAF8-203ENST00000417268 MAJINQ3KP22 176 aa10.52□□□□□ -0.73
SCAF8-203ENST00000417268 TRBV20OR9-2A0A075B6H5 130 aa10.52□□□□□ -0.73
SCAF8-203ENST00000417268 TRAV40A0A0B4J280 105 aa10.52□□□□□ -0.73
SCAF8-203ENST00000417268 A0A1B0GUS0 222 aa10.52□□□□□ -0.73
SCAF8-203ENST00000417268 IGHV1-8P0DP01 117 aa10.52□□□□□ -0.73
SCAF8-203ENST00000417268 PLA2G5P39877 138 aa10.52□□□□□ -0.73
SCAF8-203ENST00000417268 RAB9AP51151 201 aa10.52□□□□□ -0.73
SCAF8-203ENST00000417268 EMP1P54849 157 aa10.52□□□□□ -0.73
SCAF8-203ENST00000417268 METRNQ9UJH8 293 aa10.52□□□□□ -0.73
SCAF8-203ENST00000417268 DUTP33316 252 aaKnown RBP10.52□□□□□ -0.73
SCAF8-203ENST00000417268 OR5A1Q8NGJ0 315 aa10.52□□□□□ -0.73
SCAF8-203ENST00000417268 GAFA1Q96PS6 74 aa10.52□□□□□ -0.73
SCAF8-203ENST00000417268 DKK4Q9UBT3 224 aa10.52□□□□□ -0.73
SCAF8-203ENST00000417268 IGKV1D-17A0A075B6S4 117 aa10.51□□□□□ -0.73
SCAF8-203ENST00000417268 C10orf142B7Z368 130 aa10.51□□□□□ -0.73
SCAF8-203ENST00000417268 SEC11AP67812 179 aa10.51□□□□□ -0.73
SCAF8-203ENST00000417268 PRB3Q04118 309 aaPredicted RBP10.51□□□□□ -0.73
SCAF8-203ENST00000417268 Q6P435 159 aa10.51□□□□□ -0.73
SCAF8-203ENST00000417268 TMEM144Q7Z5S9 345 aa10.51□□□□□ -0.73
SCAF8-203ENST00000417268 C20orf144Q9BQM9 153 aa10.51□□□□□ -0.73
SCAF8-203ENST00000417268 KIAA2026Q5HYC2 2103 aa10.51□□□□□ -0.73
SCAF8-203ENST00000417268 TRBV6-6A0A0A6YYG2 114 aa10.51□□□□□ -0.73
SCAF8-203ENST00000417268 FAM181BA6NEQ2 426 aa10.51□□□□□ -0.73
SCAF8-203ENST00000417268 OR52E5Q8NH55 327 aa10.51□□□□□ -0.73
SCAF8-203ENST00000417268 MED13LQ71F56 2210 aa10.51□□□□□ -0.73
SCAF8-203ENST00000417268 IGHV2-26A0A0B4J1V2 119 aa10.51□□□□□ -0.73
SCAF8-203ENST00000417268 LY6HO94772 140 aa10.51□□□□□ -0.73
SCAF8-203ENST00000417268 GPX1P07203 203 aa10.51□□□□□ -0.73
SCAF8-203ENST00000417268 PFN1P07737 140 aaKnown RBP10.51□□□□□ -0.73
SCAF8-203ENST00000417268 SAA1P0DJI8 122 aaPredicted RBP10.51□□□□□ -0.73
SCAF8-203ENST00000417268 CDPF1Q6NVV7 123 aa10.51□□□□□ -0.73
SCAF8-203ENST00000417268 FOXC2Q99958 501 aa10.51□□□□□ -0.73
SCAF8-203ENST00000417268 OOSP1A8MZH6 123 aa10.51□□□□□ -0.73
SCAF8-203ENST00000417268 STAG3L3P0CL85 134 aa10.51□□□□□ -0.73
SCAF8-203ENST00000417268 GATA4P43694 442 aa10.51□□□□□ -0.73
SCAF8-203ENST00000417268 GNG5P63218 68 aa10.51□□□□□ -0.73
SCAF8-203ENST00000417268 C5orf24Q7Z6I8 188 aa10.51□□□□□ -0.73
SCAF8-203ENST00000417268 BPESC1Q9GZL8 116 aa10.51□□□□□ -0.73
SCAF8-203ENST00000417268 A0A1W2PRE2 83 aa10.5□□□□□ -0.73
SCAF8-203ENST00000417268 ZNF503-AS2A6NEH8 195 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms