RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	OXLD1	Q5BKU9	147 aa		10.01	□□□□□ -0.81
SF1-206	ENST00000413725	DMRTA1	Q5VZB9	504 aa		10.01	□□□□□ -0.81
SF1-206	ENST00000413725	IL34	Q6ZMJ4	242 aa		10.01	□□□□□ -0.81
SF1-206	ENST00000413725	ZNF546	Q86UE3	836 aa		10.01	□□□□□ -0.81
SF1-206	ENST00000413725	INO80E	Q8NBZ0	244 aa	Predicted RBP	10.01	□□□□□ -0.81
SF1-206	ENST00000413725	ZFAND3	Q9H8U3	227 aa		10.01	□□□□□ -0.81
SF1-206	ENST00000413725	MRPL27	Q9P0M9	148 aa	Known RBP	10.01	□□□□□ -0.81
SF1-206	ENST00000413725	WIPF1	O43516	503 aa		10	□□□□□ -0.81
SF1-206	ENST00000413725	ZNF207	O43670	478 aa	Known RBP	10	□□□□□ -0.81
SF1-206	ENST00000413725	DFFB	O76075	338 aa		10	□□□□□ -0.81
SF1-206	ENST00000413725	IL4	P05112	153 aa		10	□□□□□ -0.81
SF1-206	ENST00000413725	SELENOT	P62341	195 aa		10	□□□□□ -0.81
SF1-206	ENST00000413725	OR2F1	Q13607	317 aa		10	□□□□□ -0.81
SF1-206	ENST00000413725	CLINT1	Q14677	625 aa		10	□□□□□ -0.81
SF1-206	ENST00000413725		Q5BKY6	102 aa		10	□□□□□ -0.81
SF1-206	ENST00000413725	SAMD5	Q5TGI4	173 aa		10	□□□□□ -0.81
SF1-206	ENST00000413725	CYP2G1P	Q6ZSU1	146 aa		10	□□□□□ -0.81
SF1-206	ENST00000413725	BPIFC	Q8NFQ6	507 aa		10	□□□□□ -0.81
SF1-206	ENST00000413725	NARS2	Q96I59	477 aa	Known RBP	10	□□□□□ -0.81
SF1-206	ENST00000413725	ZNF414	Q96IQ9	312 aa		10	□□□□□ -0.81
SF1-206	ENST00000413725	AQP10	Q96PS8	301 aa		10	□□□□□ -0.81
SF1-206	ENST00000413725	METTL26	Q96S19	204 aa		10	□□□□□ -0.81
SF1-206	ENST00000413725	TECR	Q9NZ01	308 aa	Known RBP	10	□□□□□ -0.81
SF1-206	ENST00000413725	ZMAT5	Q9UDW3	170 aa	Known RBP	10	□□□□□ -0.81
SF1-206	ENST00000413725	WDR83OS	Q9Y284	106 aa		10	□□□□□ -0.81
SF1-206	ENST00000413725	NBEAL1	Q6ZS30	2694 aa		10	□□□□□ -0.81
SF1-206	ENST00000413725		G3V4G9	280 aa		9.99	□□□□□ -0.81
SF1-206	ENST00000413725	MPDU1	O75352	247 aa		9.99	□□□□□ -0.81
SF1-206	ENST00000413725	C8orf88	P0DMB2	117 aa		9.99	□□□□□ -0.81
SF1-206	ENST00000413725	NPPC	P23582	126 aa		9.99	□□□□□ -0.81
SF1-206	ENST00000413725	LYZ	P61626	148 aa		9.99	□□□□□ -0.81
SF1-206	ENST00000413725	RNF125	Q96EQ8	232 aa		9.99	□□□□□ -0.81
SF1-206	ENST00000413725	ATP5S	Q99766	215 aa		9.99	□□□□□ -0.81
SF1-206	ENST00000413725	RABAC1	Q9UI14	185 aa		9.99	□□□□□ -0.81
SF1-206	ENST00000413725	LSM4	Q9Y4Z0	139 aa	Known RBP	9.99	□□□□□ -0.81
SF1-206	ENST00000413725	IGHV7-4-1	A0A0J9YVY3	117 aa		9.98	□□□□□ -0.81
SF1-206	ENST00000413725	WI2-2373I1.2	A0A1W2PRP0	233 aa		9.98	□□□□□ -0.81
SF1-206	ENST00000413725		A0A1W2PS18	150 aa		9.98	□□□□□ -0.81
SF1-206	ENST00000413725		G3V3Q6	166 aa		9.98	□□□□□ -0.81
SF1-206	ENST00000413725	SMLR1	H3BR10	107 aa		9.98	□□□□□ -0.81
SF1-206	ENST00000413725	AGPAT2	O15120	278 aa		9.98	□□□□□ -0.81
SF1-206	ENST00000413725	IGLV1-51	P01701	117 aa		9.98	□□□□□ -0.81
SF1-206	ENST00000413725	EDN2	P20800	178 aa		9.98	□□□□□ -0.81
SF1-206	ENST00000413725	FGF7	P21781	194 aa		9.98	□□□□□ -0.81
SF1-206	ENST00000413725	S100A7	P31151	101 aa		9.98	□□□□□ -0.81
SF1-206	ENST00000413725	BTNL8	Q6UX41	500 aa		9.98	□□□□□ -0.81
SF1-206	ENST00000413725	OR2K2	Q8NGT1	345 aa		9.98	□□□□□ -0.81
SF1-206	ENST00000413725	PBDC1	Q9BVG4	233 aa		9.98	□□□□□ -0.81
SF1-206	ENST00000413725	SMIM3	Q9BZL3	60 aa		9.98	□□□□□ -0.81
SF1-206	ENST00000413725	TMEM231	Q9H6L2	316 aa		9.98	□□□□□ -0.81
SF1-206	ENST00000413725	SMPX	Q9UHP9	88 aa		9.98	□□□□□ -0.81
SF1-206	ENST00000413725	PFDN2	Q9UHV9	154 aa		9.98	□□□□□ -0.81
SF1-206	ENST00000413725	TNFSF18	Q9UNG2	199 aa		9.98	□□□□□ -0.81
SF1-206	ENST00000413725	IFNA5	P01569	189 aa		9.97	□□□□□ -0.81
SF1-206	ENST00000413725	HNRNPC	P07910	306 aa	Known RBP eCLIP	9.97	□□□□□ -0.81
SF1-206	ENST00000413725	LINC00869	P0C866	280 aa		9.97	□□□□□ -0.81
SF1-206	ENST00000413725	CRYBB3	P26998	211 aa		9.97	□□□□□ -0.81
SF1-206	ENST00000413725	CAMLG	P49069	296 aa		9.97	□□□□□ -0.81
SF1-206	ENST00000413725	USF2	Q15853	346 aa	Predicted RBP	9.97	□□□□□ -0.81
SF1-206	ENST00000413725	LCN12	Q6JVE5	192 aa		9.97	□□□□□ -0.81
SF1-206	ENST00000413725	ADAMTSL5	Q6ZMM2	481 aa		9.97	□□□□□ -0.81
SF1-206	ENST00000413725	AKAP14	Q86UN6	197 aa		9.97	□□□□□ -0.81
SF1-206	ENST00000413725	GRAMD2B	Q96HH9	432 aa		9.97	□□□□□ -0.81
SF1-206	ENST00000413725	ST6GAL2	Q96JF0	529 aa		9.97	□□□□□ -0.81
SF1-206	ENST00000413725	MGST2	Q99735	147 aa		9.97	□□□□□ -0.81
SF1-206	ENST00000413725	IGHV3-49	A0A0A0MS15	119 aa		9.96	□□□□□ -0.82
SF1-206	ENST00000413725		A0A1B0GVG6	124 aa		9.96	□□□□□ -0.82
SF1-206	ENST00000413725	CHEK1	O14757	476 aa		9.96	□□□□□ -0.82
SF1-206	ENST00000413725	ARPC5	O15511	151 aa		9.96	□□□□□ -0.82
SF1-206	ENST00000413725	GATA2	P23769	480 aa	Predicted RBP	9.96	□□□□□ -0.82
SF1-206	ENST00000413725	EIF2B2	P49770	351 aa	Known RBP	9.96	□□□□□ -0.82
SF1-206	ENST00000413725	AP2S1	P53680	142 aa	Predicted RBP	9.96	□□□□□ -0.82
SF1-206	ENST00000413725	EGFEM1P	Q0D2K5	195 aa		9.96	□□□□□ -0.82
SF1-206	ENST00000413725	ZNF266	Q14584	549 aa		9.96	□□□□□ -0.82
SF1-206	ENST00000413725	DEFB114	Q30KQ6	69 aa		9.96	□□□□□ -0.82
SF1-206	ENST00000413725	PXDC1	Q5TGL8	231 aa		9.96	□□□□□ -0.82
SF1-206	ENST00000413725	TCTE3	Q8IZS6	198 aa		9.96	□□□□□ -0.82
SF1-206	ENST00000413725	ZNF709	Q8N972	641 aa		9.96	□□□□□ -0.82
SF1-206	ENST00000413725	SCGB1C1	Q8TD33	95 aa		9.96	□□□□□ -0.82
SF1-206	ENST00000413725	PPP1R14B	Q96C90	147 aa		9.96	□□□□□ -0.82
SF1-206	ENST00000413725	RHPN1-AS1	Q9BWJ2	59 aa		9.96	□□□□□ -0.82
SF1-206	ENST00000413725	GGTLC1	Q9BX51	225 aa		9.96	□□□□□ -0.82
SF1-206	ENST00000413725	KCNIP2	Q9NS61	270 aa		9.96	□□□□□ -0.82
SF1-206	ENST00000413725	FBXL17	Q9UF56	701 aa		9.96	□□□□□ -0.82
SF1-206	ENST00000413725	MLX	Q9UH92	298 aa		9.96	□□□□□ -0.82
SF1-206	ENST00000413725	SLC45A2	Q9UMX9	530 aa		9.96	□□□□□ -0.82
SF1-206	ENST00000413725	IGHV3OR16-13	A0A075B7E8	117 aa		9.95	□□□□□ -0.82
SF1-206	ENST00000413725	IGHV3-74	A0A0B4J1X5	117 aa		9.95	□□□□□ -0.82
SF1-206	ENST00000413725	RNF222	A6NCQ9	220 aa		9.95	□□□□□ -0.82
SF1-206	ENST00000413725	C17orf112	F2Z3M2	114 aa		9.95	□□□□□ -0.82
SF1-206	ENST00000413725	CD5	P06127	495 aa		9.95	□□□□□ -0.82
SF1-206	ENST00000413725	ORM2	P19652	201 aa		9.95	□□□□□ -0.82
SF1-206	ENST00000413725	OPCML	Q14982	345 aa		9.95	□□□□□ -0.82
SF1-206	ENST00000413725	BEAN1	Q3B7T3	259 aa		9.95	□□□□□ -0.82
SF1-206	ENST00000413725	CD300E	Q496F6	205 aa	Predicted RBP	9.95	□□□□□ -0.82
SF1-206	ENST00000413725	KPRP	Q5T749	579 aa	Predicted RBP	9.95	□□□□□ -0.82
SF1-206	ENST00000413725	LAMTOR1	Q6IAA8	161 aa		9.95	□□□□□ -0.82
SF1-206	ENST00000413725	TMEM182	Q6ZP80	229 aa	Predicted RBP	9.95	□□□□□ -0.82
SF1-206	ENST00000413725		Q6ZRG5	221 aa		9.95	□□□□□ -0.82
SF1-206	ENST00000413725	RBPMS2	Q6ZRY4	209 aa	Known RBP	9.95	□□□□□ -0.82

Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms