RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 NEURL2Q9BR09 285 aa14.89□□□□□ -0.03
PDLIM2-207ENST00000409417 TMEM231Q9H6L2 316 aa14.89□□□□□ -0.03
PDLIM2-207ENST00000409417 FNDC10F2Z333 226 aa14.88□□□□□ -0.03
PDLIM2-207ENST00000409417 CD7P09564 240 aa14.88□□□□□ -0.03
PDLIM2-207ENST00000409417 IGHV4-30-4P0DP06 118 aa14.88□□□□□ -0.03
PDLIM2-207ENST00000409417 CAV2P51636 162 aa14.88□□□□□ -0.03
PDLIM2-207ENST00000409417 H2BFSP57053 126 aa14.88□□□□□ -0.03
PDLIM2-207ENST00000409417 USF2Q15853 346 aaPredicted RBP14.88□□□□□ -0.03
PDLIM2-207ENST00000409417 LILRB2Q8N423 598 aa14.88□□□□□ -0.03
PDLIM2-207ENST00000409417 NARS2Q96I59 477 aaKnown RBP14.88□□□□□ -0.03
PDLIM2-207ENST00000409417 U3KQE9 123 aa14.88□□□□□ -0.03
PDLIM2-207ENST00000409417 IGHV3-66A0A0C4DH42 116 aa14.87□□□□□ -0.03
PDLIM2-207ENST00000409417 SMCO3A2RU48 225 aa14.87□□□□□ -0.03
PDLIM2-207ENST00000409417 A8MZ25 164 aa14.87□□□□□ -0.03
PDLIM2-207ENST00000409417 BCAP31P51572 246 aa14.87□□□□□ -0.03
PDLIM2-207ENST00000409417 RGS21Q2M5E4 152 aa14.87□□□□□ -0.03
PDLIM2-207ENST00000409417 FAM90A2PQ658T7 463 aa14.87□□□□□ -0.03
PDLIM2-207ENST00000409417 RNF125Q96EQ8 232 aa14.87□□□□□ -0.03
PDLIM2-207ENST00000409417 GGACTQ9BVM4 153 aa14.87□□□□□ -0.03
PDLIM2-207ENST00000409417 LYRM2Q9NU23 88 aaPredicted RBP14.87□□□□□ -0.03
PDLIM2-207ENST00000409417 ALG5Q9Y673 324 aa14.87□□□□□ -0.03
PDLIM2-207ENST00000409417 DEDDO75618 318 aa14.86□□□□□ -0.03
PDLIM2-207ENST00000409417 DFFBO76075 338 aa14.86□□□□□ -0.03
PDLIM2-207ENST00000409417 HNRNPCP07910 306 aaKnown RBP eCLIP14.86□□□□□ -0.03
PDLIM2-207ENST00000409417 ARL16Q0P5N6 197 aa14.86□□□□□ -0.03
PDLIM2-207ENST00000409417 TCF24Q7RTU0 167 aa14.86□□□□□ -0.03
PDLIM2-207ENST00000409417 FAM24AA6NFZ4 105 aa14.85□□□□□ -0.03
PDLIM2-207ENST00000409417 FRMD6-AS1P0C7T7 363 aa14.85□□□□□ -0.03
PDLIM2-207ENST00000409417 RRAS2P62070 204 aaPredicted RBP14.85□□□□□ -0.03
PDLIM2-207ENST00000409417 OR2F1Q13607 317 aa14.85□□□□□ -0.03
PDLIM2-207ENST00000409417 GRAMD2BQ96HH9 432 aa14.85□□□□□ -0.03
PDLIM2-207ENST00000409417 C19orf73Q9NVV2 129 aa14.85□□□□□ -0.03
PDLIM2-207ENST00000409417 MGAT4CQ9UBM8 478 aa14.85□□□□□ -0.03
PDLIM2-207ENST00000409417 RABAC1Q9UI14 185 aa14.85□□□□□ -0.03
PDLIM2-207ENST00000409417 OR4C46A6NHA9 309 aa14.84□□□□□ -0.03
PDLIM2-207ENST00000409417 CFDP00746 253 aaPredicted RBP14.84□□□□□ -0.03
PDLIM2-207ENST00000409417 RLN2P04090 185 aa14.84□□□□□ -0.03
PDLIM2-207ENST00000409417 P2RY1P47900 373 aa14.84□□□□□ -0.03
PDLIM2-207ENST00000409417 PBDC1Q9BVG4 233 aa14.84□□□□□ -0.03
PDLIM2-207ENST00000409417 NPVFQ9HCQ7 196 aa14.84□□□□□ -0.03
PDLIM2-207ENST00000409417 OR11H12B2RN74 326 aa14.83□□□□□ -0.03
PDLIM2-207ENST00000409417 CST7O76096 145 aa14.83□□□□□ -0.03
PDLIM2-207ENST00000409417 SULT1A1P50225 295 aa14.83□□□□□ -0.03
PDLIM2-207ENST00000409417 TMEM252Q8N6L7 170 aa14.83□□□□□ -0.03
PDLIM2-207ENST00000409417 TUBA4BQ9H853 241 aa14.83□□□□□ -0.03
PDLIM2-207ENST00000409417 PFDN2Q9UHV9 154 aa14.83□□□□□ -0.03
PDLIM2-207ENST00000409417 COL7A1Q02388 2944 aa14.83□□□□□ -0.04
PDLIM2-207ENST00000409417 E5RGE8 158 aa14.82□□□□□ -0.04
PDLIM2-207ENST00000409417 EIF2B2P49770 351 aaKnown RBP14.82□□□□□ -0.04
PDLIM2-207ENST00000409417 LYZP61626 148 aa14.82□□□□□ -0.04
PDLIM2-207ENST00000409417 RPL11P62913 178 aaKnown RBP14.82□□□□□ -0.04
PDLIM2-207ENST00000409417 PAFAH1B2P68402 229 aa14.82□□□□□ -0.04
PDLIM2-207ENST00000409417 SLC38A11Q08AI6 406 aa14.82□□□□□ -0.04
PDLIM2-207ENST00000409417 OXA1LQ15070 435 aa14.82□□□□□ -0.04
PDLIM2-207ENST00000409417 LRRC37A5PQ49AS3 106 aa14.82□□□□□ -0.04
PDLIM2-207ENST00000409417 STX12Q86Y82 276 aa14.82□□□□□ -0.04
PDLIM2-207ENST00000409417 BPIFCQ8NFQ6 507 aa14.82□□□□□ -0.04
PDLIM2-207ENST00000409417 PPP1R1CQ8WVI7 109 aa14.82□□□□□ -0.04
PDLIM2-207ENST00000409417 IGKV3-7A0A075B6H7 116 aa14.82□□□□□ -0.04
PDLIM2-207ENST00000409417 IGSF23A1L1A6 192 aa14.82□□□□□ -0.04
PDLIM2-207ENST00000409417 BUB3O43684 328 aa14.82□□□□□ -0.04
PDLIM2-207ENST00000409417 NUP62P37198 522 aaPredicted RBP14.82□□□□□ -0.04
PDLIM2-207ENST00000409417 TEPPQ6URK8 271 aa14.82□□□□□ -0.04
PDLIM2-207ENST00000409417 C16orf54Q6UWD8 224 aa14.82□□□□□ -0.04
PDLIM2-207ENST00000409417 DEFB125Q8N687 156 aa14.82□□□□□ -0.04
PDLIM2-207ENST00000409417 TMEM217Q8N7C4 229 aa14.82□□□□□ -0.04
PDLIM2-207ENST00000409417 FAM110AQ9BQ89 295 aa14.82□□□□□ -0.04
PDLIM2-207ENST00000409417 WFDC10AQ9H1F0 79 aa14.82□□□□□ -0.04
PDLIM2-207ENST00000409417 HELTA6NFD8 242 aa14.81□□□□□ -0.04
PDLIM2-207ENST00000409417 H0YIZ8 118 aa14.81□□□□□ -0.04
PDLIM2-207ENST00000409417 NHLRC4P0CG21 123 aaPredicted RBP14.81□□□□□ -0.04
PDLIM2-207ENST00000409417 S100A11P31949 105 aa14.81□□□□□ -0.04
PDLIM2-207ENST00000409417 SELENOTP62341 195 aa14.81□□□□□ -0.04
PDLIM2-207ENST00000409417 HBG1P69891 147 aa14.81□□□□□ -0.04
PDLIM2-207ENST00000409417 HBG2P69892 147 aa14.81□□□□□ -0.04
PDLIM2-207ENST00000409417 TMEM182Q6ZP80 229 aaPredicted RBP14.81□□□□□ -0.04
PDLIM2-207ENST00000409417 CYP2G1PQ6ZSU1 146 aa14.81□□□□□ -0.04
PDLIM2-207ENST00000409417 GBGT1Q8N5D6 347 aa14.81□□□□□ -0.04
PDLIM2-207ENST00000409417 GLMPQ8WWB7 406 aa14.81□□□□□ -0.04
PDLIM2-207ENST00000409417 MED28Q9H204 178 aa14.81□□□□□ -0.04
PDLIM2-207ENST00000409417 MS4A6AQ9H2W1 248 aa14.81□□□□□ -0.04
PDLIM2-207ENST00000409417 OR5AC2Q9NZP5 309 aa14.81□□□□□ -0.04
PDLIM2-207ENST00000409417 TRAV2A0A0B4J234 112 aa14.8□□□□□ -0.04
PDLIM2-207ENST00000409417 CXCL3P19876 107 aa14.8□□□□□ -0.04
PDLIM2-207ENST00000409417 GATA2P23769 480 aaPredicted RBP14.8□□□□□ -0.04
PDLIM2-207ENST00000409417 TFPI2P48307 235 aa14.8□□□□□ -0.04
PDLIM2-207ENST00000409417 SBSPONQ8IVN8 264 aa14.8□□□□□ -0.04
PDLIM2-207ENST00000409417 DNASE2O00115 360 aaPredicted RBP14.79□□□□□ -0.04
PDLIM2-207ENST00000409417 MPC2O95563 127 aa14.79□□□□□ -0.04
PDLIM2-207ENST00000409417 PET100P0DJ07 73 aa14.79□□□□□ -0.04
PDLIM2-207ENST00000409417 AP2S1P53680 142 aaPredicted RBP14.79□□□□□ -0.04
PDLIM2-207ENST00000409417 ODF3L2Q3SX64 289 aa14.79□□□□□ -0.04
PDLIM2-207ENST00000409417 ASCL2Q99929 193 aa14.79□□□□□ -0.04
PDLIM2-207ENST00000409417 RNF126Q9BV68 326 aa14.79□□□□□ -0.04
PDLIM2-207ENST00000409417 SLC25A31Q9H0C2 315 aa14.79□□□□□ -0.04
PDLIM2-207ENST00000409417 SRD5A3Q9H8P0 318 aa14.79□□□□□ -0.04
PDLIM2-207ENST00000409417 UQCC1Q9NVA1 299 aa14.79□□□□□ -0.04
PDLIM2-207ENST00000409417 SLC45A2Q9UMX9 530 aa14.79□□□□□ -0.04
PDLIM2-207ENST00000409417 DNAH9Q9NYC9 4486 aa14.78□□□□□ -0.04
PDLIM2-207ENST00000409417 CMC4P56277 68 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms