RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 LSM4Q9Y4Z0 139 aaKnown RBP13.14□□□□□ -0.31
CSNK1D-204ENST00000398519 G3V3Q6 166 aa13.13□□□□□ -0.31
CSNK1D-204ENST00000398519 IL4P05112 153 aa13.13□□□□□ -0.31
CSNK1D-204ENST00000398519 RPL12P30050 165 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-204ENST00000398519 OR2F1Q13607 317 aa13.13□□□□□ -0.31
CSNK1D-204ENST00000398519 USF2Q15853 346 aaPredicted RBP13.13□□□□□ -0.31
CSNK1D-204ENST00000398519 TEPPQ6URK8 271 aa13.13□□□□□ -0.31
CSNK1D-204ENST00000398519 BTNL8Q6UX41 500 aa13.13□□□□□ -0.31
CSNK1D-204ENST00000398519 OR51G1Q8NGK1 321 aa13.13□□□□□ -0.31
CSNK1D-204ENST00000398519 OR5C1Q8NGR4 320 aa13.13□□□□□ -0.31
CSNK1D-204ENST00000398519 DYNLRB2Q8TF09 96 aa13.13□□□□□ -0.31
CSNK1D-204ENST00000398519 TMEM147Q9BVK8 224 aa13.13□□□□□ -0.31
CSNK1D-204ENST00000398519 UQCC1Q9NVA1 299 aa13.13□□□□□ -0.31
CSNK1D-204ENST00000398519 SELENOKQ9Y6D0 94 aa13.13□□□□□ -0.31
CSNK1D-204ENST00000398519 IGHV3-49A0A0A0MS15 119 aa13.12□□□□□ -0.31
CSNK1D-204ENST00000398519 IGHV7-4-1A0A0J9YVY3 117 aa13.12□□□□□ -0.31
CSNK1D-204ENST00000398519 WI2-2373I1.2A0A1W2PRP0 233 aa13.12□□□□□ -0.31
CSNK1D-204ENST00000398519 FABP1P07148 127 aa13.12□□□□□ -0.31
CSNK1D-204ENST00000398519 DEFB114Q30KQ6 69 aa13.12□□□□□ -0.31
CSNK1D-204ENST00000398519 TMEM182Q6ZP80 229 aaPredicted RBP13.12□□□□□ -0.31
CSNK1D-204ENST00000398519 SMPXQ9UHP9 88 aa13.12□□□□□ -0.31
CSNK1D-204ENST00000398519 HSPB11Q9Y547 144 aa13.12□□□□□ -0.31
CSNK1D-204ENST00000398519 UBE2L5PA0A1B0GUS4 154 aa13.11□□□□□ -0.31
CSNK1D-204ENST00000398519 APOHP02749 345 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-204ENST00000398519 GATA2P23769 480 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-204ENST00000398519 ATP6V1FQ16864 119 aa13.11□□□□□ -0.31
CSNK1D-204ENST00000398519 CD300EQ496F6 205 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-204ENST00000398519 CYP2G1PQ6ZSU1 146 aa13.11□□□□□ -0.31
CSNK1D-204ENST00000398519 RNF125Q96EQ8 232 aa13.11□□□□□ -0.31
CSNK1D-204ENST00000398519 TECRQ9NZ01 308 aaKnown RBP13.11□□□□□ -0.31
CSNK1D-204ENST00000398519 WDR83OSQ9Y284 106 aa13.11□□□□□ -0.31
CSNK1D-204ENST00000398519 IGHV3OR16-13A0A075B7E8 117 aa13.11□□□□□ -0.31
CSNK1D-204ENST00000398519 IGHV3-74A0A0B4J1X5 117 aa13.11□□□□□ -0.31
CSNK1D-204ENST00000398519 IZUMO1RA6ND01 250 aa13.11□□□□□ -0.31
CSNK1D-204ENST00000398519 CHEK1O14757 476 aa13.11□□□□□ -0.31
CSNK1D-204ENST00000398519 CRYBB3P26998 211 aa13.11□□□□□ -0.31
CSNK1D-204ENST00000398519 CLINT1Q14677 625 aa13.11□□□□□ -0.31
CSNK1D-204ENST00000398519 METTL26Q96S19 204 aa13.11□□□□□ -0.31
CSNK1D-204ENST00000398519 MGST2Q99735 147 aa13.11□□□□□ -0.31
CSNK1D-204ENST00000398519 RHPN1-AS1Q9BWJ2 59 aa13.11□□□□□ -0.31
CSNK1D-204ENST00000398519 hCG_2014768A0A024R1R8 64 aa13.1□□□□□ -0.31
CSNK1D-204ENST00000398519 SMLR1H3BR10 107 aa13.1□□□□□ -0.31
CSNK1D-204ENST00000398519 NPPCP23582 126 aa13.1□□□□□ -0.31
CSNK1D-204ENST00000398519 LYZP61626 148 aa13.1□□□□□ -0.31
CSNK1D-204ENST00000398519 OR2K2Q8NGT1 345 aa13.1□□□□□ -0.31
CSNK1D-204ENST00000398519 ST8SIA2Q92186 375 aa13.1□□□□□ -0.31
CSNK1D-204ENST00000398519 PBDC1Q9BVG4 233 aa13.1□□□□□ -0.31
CSNK1D-204ENST00000398519 FXYD6-FXYD2A0A087WZ82 144 aa13.09□□□□□ -0.31
CSNK1D-204ENST00000398519 IGHV3-66A0A0C4DH42 116 aa13.09□□□□□ -0.31
CSNK1D-204ENST00000398519 AGPAT2O15120 278 aa13.09□□□□□ -0.31
CSNK1D-204ENST00000398519 TMEM61Q8N0U2 210 aa13.09□□□□□ -0.31
CSNK1D-204ENST00000398519 BPIFCQ8NFQ6 507 aa13.09□□□□□ -0.31
CSNK1D-204ENST00000398519 AQP10Q96PS8 301 aa13.09□□□□□ -0.31
CSNK1D-204ENST00000398519 RNF2Q99496 336 aa13.09□□□□□ -0.31
CSNK1D-204ENST00000398519 VSIRQ9H7M9 311 aa13.09□□□□□ -0.31
CSNK1D-204ENST00000398519 CFDP00746 253 aaPredicted RBP13.08□□□□□ -0.32
CSNK1D-204ENST00000398519 PRB2P02812 416 aaPredicted RBP13.08□□□□□ -0.32
CSNK1D-204ENST00000398519 HNRNPCP07910 306 aaKnown RBP eCLIP13.08□□□□□ -0.322e-7■■□□□ 13.4
CSNK1D-204ENST00000398519 SELENOTP62341 195 aa13.08□□□□□ -0.32
CSNK1D-204ENST00000398519 LCN12Q6JVE5 192 aa13.08□□□□□ -0.32
CSNK1D-204ENST00000398519 SMIM3Q9BZL3 60 aa13.08□□□□□ -0.32
CSNK1D-204ENST00000398519 ZMAT5Q9UDW3 170 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-204ENST00000398519 RABAC1Q9UI14 185 aa13.08□□□□□ -0.32
CSNK1D-204ENST00000398519 SLC45A2Q9UMX9 530 aa13.08□□□□□ -0.32
CSNK1D-204ENST00000398519 ZNF256Q9Y2P7 627 aaPredicted RBP13.08□□□□□ -0.32
CSNK1D-204ENST00000398519 U3KQE9 123 aa13.08□□□□□ -0.32
CSNK1D-204ENST00000398519 A0A1B0GVG6 124 aa13.07□□□□□ -0.32
CSNK1D-204ENST00000398519 CAMLGP49069 296 aa13.07□□□□□ -0.32
CSNK1D-204ENST00000398519 ZNF546Q86UE3 836 aa13.07□□□□□ -0.32
CSNK1D-204ENST00000398519 ATP5SQ99766 215 aa13.07□□□□□ -0.32
CSNK1D-204ENST00000398519 GGTLC1Q9BX51 225 aa13.07□□□□□ -0.32
CSNK1D-204ENST00000398519 AURKAIP1Q9NWT8 199 aaPredicted RBP13.07□□□□□ -0.32
CSNK1D-204ENST00000398519 TNFSF18Q9UNG2 199 aa13.07□□□□□ -0.32
CSNK1D-204ENST00000398519 LINC00869P0C866 280 aa13.07□□□□□ -0.32
CSNK1D-204ENST00000398519 FGF7P21781 194 aa13.07□□□□□ -0.32
CSNK1D-204ENST00000398519 EIF2B2P49770 351 aaKnown RBP13.07□□□□□ -0.32
CSNK1D-204ENST00000398519 STPG3Q8N7X2 389 aa13.07□□□□□ -0.32
CSNK1D-204ENST00000398519 PRR25Q96S07 402 aa13.07□□□□□ -0.32
CSNK1D-204ENST00000398519 RNF222A6NCQ9 220 aa13.06□□□□□ -0.32
CSNK1D-204ENST00000398519 ZNF785A8K8V0 405 aa13.06□□□□□ -0.32
CSNK1D-204ENST00000398519 GP9P14770 177 aa13.06□□□□□ -0.32
CSNK1D-204ENST00000398519 ORM2P19652 201 aa13.06□□□□□ -0.32
CSNK1D-204ENST00000398519 BMI1P35226 326 aa13.06□□□□□ -0.32
CSNK1D-204ENST00000398519 NUP62P37198 522 aaPredicted RBP13.06□□□□□ -0.32
CSNK1D-204ENST00000398519 RAB31Q13636 194 aa13.06□□□□□ -0.32
CSNK1D-204ENST00000398519 NARS2Q96I59 477 aaKnown RBP13.06□□□□□ -0.32
CSNK1D-204ENST00000398519 ST6GAL2Q96JF0 529 aa13.06□□□□□ -0.32
CSNK1D-204ENST00000398519 WFDC1Q9HC57 220 aa13.06□□□□□ -0.32
CSNK1D-204ENST00000398519 A0A1W2PS18 150 aa13.05□□□□□ -0.32
CSNK1D-204ENST00000398519 BUB3O43684 328 aa13.05□□□□□ -0.32
CSNK1D-204ENST00000398519 MPDU1O75352 247 aa13.05□□□□□ -0.32
CSNK1D-204ENST00000398519 DFFBO76075 338 aa13.05□□□□□ -0.32
CSNK1D-204ENST00000398519 PLP1P60201 277 aa13.05□□□□□ -0.32
CSNK1D-204ENST00000398519 FAM90A2PQ658T7 463 aa13.05□□□□□ -0.32
CSNK1D-204ENST00000398519 RBPMS2Q6ZRY4 209 aaKnown RBP13.05□□□□□ -0.32
CSNK1D-204ENST00000398519 INO80EQ8NBZ0 244 aaPredicted RBP13.05□□□□□ -0.32
CSNK1D-204ENST00000398519 OR1B1Q8NGR6 318 aa13.05□□□□□ -0.32
CSNK1D-204ENST00000398519 NPCDR1Q9BY65 106 aa13.05□□□□□ -0.32
CSNK1D-204ENST00000398519 WDR61Q9GZS3 305 aaKnown RBP13.05□□□□□ -0.32
CSNK1D-204ENST00000398519 TMEM231Q9H6L2 316 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms