RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 BIKQ13323 160 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 VMA21Q3ZAQ7 101 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 AMTNQ6UX39 209 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 TMEM14EPQ6UXP3 125 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 AMN1Q8IY45 258 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 ZFP62Q8NB50 900 aaPredicted RBP3.36□□□□□ -1.87
GABPB1-204ENST00000396464 OR51A4Q8NGJ6 313 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 OR2T10Q8NGZ9 312 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 RPS4Y2Q8TD47 263 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 NIT2Q9NQR4 276 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 IL36BQ9NZH7 164 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 FUT9Q9Y231 359 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 ZNF835Q9Y2P0 537 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 KLK5Q9Y337 293 aaPredicted RBP3.36□□□□□ -1.87
GABPB1-204ENST00000396464 GLI3P10071 1580 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 TOGARAM1Q9Y4F4 1720 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 NLRC5Q86WI3 1866 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 A0A0D9SEW6 157 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 PVALEFA0A1B0GWK0 134 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 TMEM223A0PJW6 202 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 ODAMA1E959 279 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 A6NDX4 124 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 ARRDC5A6NEK1 342 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 C11orf94C9JXX5 98 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 K7ERS5 55 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 PAEPP09466 180 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 ATP6V0CP27449 155 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 CSN1S1P47710 185 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 RAB5CP51148 216 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 AKR1D1P51857 326 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 TSPEAR-AS2P59090 65 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 MSMO1Q15800 293 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 IL17AQ16552 155 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 TMEM69Q5SWH9 247 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 FAM104BQ5XKR9 115 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 SPATA12Q7Z6I5 190 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 ZFAND2AQ8N6M9 145 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 Q8N9W7 124 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 TYMSOSQ8TAI1 123 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 ZNF418Q8TF45 676 aaPredicted RBP3.36□□□□□ -1.87
GABPB1-204ENST00000396464 NRTNQ99748 197 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 ZNF222Q9UK12 451 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 KDM3BQ7LBC6 1761 aa3.35□□□□□ -1.87
GABPB1-204ENST00000396464 BTAF1O14981 1849 aa3.35□□□□□ -1.87
GABPB1-204ENST00000396464 BCL9LQ86UU0 1499 aa3.35□□□□□ -1.87
GABPB1-204ENST00000396464 IGHV1-3A0A0C4DH29 117 aa3.35□□□□□ -1.87
GABPB1-204ENST00000396464 A0A1W2PP18 115 aa3.35□□□□□ -1.87
GABPB1-204ENST00000396464 RGS12O14924 1447 aa3.35□□□□□ -1.87
GABPB1-204ENST00000396464 GGCTO75223 188 aaKnown RBP3.35□□□□□ -1.87
GABPB1-204ENST00000396464 GPX1P07203 203 aa3.35□□□□□ -1.87
GABPB1-204ENST00000396464 MUC1P15941 1255 aaPredicted RBP3.35□□□□□ -1.87
GABPB1-204ENST00000396464 ZNF141Q15928 474 aa3.35□□□□□ -1.87
GABPB1-204ENST00000396464 CCSMST1Q4G0I0 132 aa3.35□□□□□ -1.87
GABPB1-204ENST00000396464 MRPL51Q4U2R6 128 aaKnown RBP3.35□□□□□ -1.87
GABPB1-204ENST00000396464 ZC2HC1BQ5TFG8 222 aa3.35□□□□□ -1.87
GABPB1-204ENST00000396464 AMMECR1LQ6DCA0 310 aa3.35□□□□□ -1.87
GABPB1-204ENST00000396464 ZNF101Q8IZC7 436 aa3.35□□□□□ -1.87
GABPB1-204ENST00000396464 RNF175Q8N4F7 328 aa3.35□□□□□ -1.87
GABPB1-204ENST00000396464 PPTC7Q8NI37 304 aa3.35□□□□□ -1.87
GABPB1-204ENST00000396464 TMEM106AQ96A25 262 aa3.35□□□□□ -1.87
GABPB1-204ENST00000396464 TBL1YQ9BQ87 522 aa3.35□□□□□ -1.87
GABPB1-204ENST00000396464 GABARAPL1Q9H0R8 117 aa3.35□□□□□ -1.87
GABPB1-204ENST00000396464 TMEM133Q9H2Q1 129 aa3.35□□□□□ -1.87
GABPB1-204ENST00000396464 CBLN4Q9NTU7 201 aa3.35□□□□□ -1.87
GABPB1-204ENST00000396464 OTOFQ9HC10 1997 aa3.34□□□□□ -1.87
GABPB1-204ENST00000396464 C5P01031 1676 aa3.34□□□□□ -1.87
GABPB1-204ENST00000396464 LRP4O75096 1905 aa3.34□□□□□ -1.87
GABPB1-204ENST00000396464 SIPA1L3O60292 1781 aaPredicted RBP3.34□□□□□ -1.87
GABPB1-204ENST00000396464 PAPPAQ13219 1627 aa3.34□□□□□ -1.87
GABPB1-204ENST00000396464 AFDNP55196 1824 aaKnown RBP3.34□□□□□ -1.88
GABPB1-204ENST00000396464 LOC100130705A0A1B0GUX0 176 aa3.34□□□□□ -1.88
GABPB1-204ENST00000396464 RBFOX2O43251 390 aaKnown RBP eCLIP3.34□□□□□ -1.88
GABPB1-204ENST00000396464 NAPSAO96009 420 aa3.34□□□□□ -1.88
GABPB1-204ENST00000396464 PTHLHP12272 177 aa3.34□□□□□ -1.88
GABPB1-204ENST00000396464 LGALS3P17931 250 aaKnown RBP3.34□□□□□ -1.88
GABPB1-204ENST00000396464 PSMB8P28062 276 aa3.34□□□□□ -1.88
GABPB1-204ENST00000396464 SDC2P34741 201 aa3.34□□□□□ -1.88
GABPB1-204ENST00000396464 ZNF181Q2M3W8 571 aa3.34□□□□□ -1.88
GABPB1-204ENST00000396464 CTAGE3PQ8IX95 158 aa3.34□□□□□ -1.88
GABPB1-204ENST00000396464 LYG1Q8N1E2 194 aa3.34□□□□□ -1.88
GABPB1-204ENST00000396464 TCTEX1D1Q8N7M0 179 aa3.34□□□□□ -1.88
GABPB1-204ENST00000396464 OR4E2Q8NGC2 313 aa3.34□□□□□ -1.88
GABPB1-204ENST00000396464 RBMXL1Q96E39 390 aaKnown RBP3.34□□□□□ -1.88
GABPB1-204ENST00000396464 ZNF471Q9BX82 626 aaPredicted RBP3.34□□□□□ -1.88
GABPB1-204ENST00000396464 TAF9BQ9HBM6 251 aa3.34□□□□□ -1.88
GABPB1-204ENST00000396464 BAIAP2Q9UQB8 552 aa3.34□□□□□ -1.88
GABPB1-204ENST00000396464 DICER1Q9UPY3 1922 aaKnown RBP3.34□□□□□ -1.88
GABPB1-204ENST00000396464 SBF2Q86WG5 1849 aa3.33□□□□□ -1.88
GABPB1-204ENST00000396464 PLXND1Q9Y4D7 1925 aa3.33□□□□□ -1.88
GABPB1-204ENST00000396464 DISP2A7MBM2 1401 aa3.33□□□□□ -1.88
GABPB1-204ENST00000396464 KDM6AO15550 1401 aaPredicted RBP3.33□□□□□ -1.88
GABPB1-204ENST00000396464 A0A0J9YWU9 116 aa3.33□□□□□ -1.88
GABPB1-204ENST00000396464 A6NED7 52 aa3.33□□□□□ -1.88
GABPB1-204ENST00000396464 NPFFO15130 113 aa3.33□□□□□ -1.88
GABPB1-204ENST00000396464 HRASP01112 189 aa3.33□□□□□ -1.88
GABPB1-204ENST00000396464 KRASP01116 189 aa3.33□□□□□ -1.88
GABPB1-204ENST00000396464 TRGV3P03979 118 aa3.33□□□□□ -1.88
GABPB1-204ENST00000396464 FABP2P12104 132 aa3.33□□□□□ -1.88
GABPB1-204ENST00000396464 FGF7P21781 194 aa3.33□□□□□ -1.88
GABPB1-204ENST00000396464 S100A4P26447 101 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms