RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 TRBV7-6A0A0J9YX20 115 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 FAM236AA0A1B0GUQ0 79 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 FAM236BA0A1B0GV22 79 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 A0A1W2PPB8 328 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 C7orf71A4D174 169 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 MEIS3P1A6NDR6 274 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 DPRXA6NFQ7 191 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 ZNF727A8MUV8 499 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 KIR3DP1A8MWS1 328 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 TAX1BP3O14907 124 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 COX7A2P2O60397 106 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 KRASP01116 189 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 LTAP01374 205 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 APCSP02743 223 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 TRGC2P03986 189 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 HLA-DPB1P04440 258 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 CD14P08571 375 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 INAFM2P0DMQ5 153 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 SCGB1C2P0DMR2 95 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 CRYGSP22914 178 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 NFYBP25208 207 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 S100A2P29034 98 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 IMPA1P29218 277 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 RPL22P35268 128 aaKnown RBP1.17□□□□□ -2.22
TRAV40-201ENST00000390467 CA7P43166 264 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 ZNF80P51504 273 aaPredicted RBP1.17□□□□□ -2.22
TRAV40-201ENST00000390467 TMBIM6P55061 237 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 GABARAPL2P60520 117 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 S100A10P60903 97 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 CRADDP78560 199 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 PLGLB1Q02325 96 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 ELOCQ15369 112 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 MSMO1Q15800 293 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 RRN3P1Q2M238 152 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 C6orf52Q5T4I8 152 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 LCN15Q6UWW0 184 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 FOXI2Q6ZQN5 318 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 LCA10Q71F78 164 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 MSRB3Q8IXL7 192 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 C5orf17Q8NAS9 161 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 OR5C1Q8NGR4 320 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 OR2T10Q8NGZ9 312 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 MRPL30Q8TCC3 161 aaKnown RBP1.17□□□□□ -2.22
TRAV40-201ENST00000390467 SCGB1C1Q8TD33 95 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 DCANP1Q8TF63 244 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 RBPMSQ93062 196 aaKnown RBP1.17□□□□□ -2.22
TRAV40-201ENST00000390467 DPH3Q96FX2 82 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 AP1S3Q96PC3 154 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 CAMK2N2Q96S95 79 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 DERL1Q9BUN8 251 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 SNRNP25Q9BV90 132 aaKnown RBP1.17□□□□□ -2.22
TRAV40-201ENST00000390467 SLC25A2Q9BXI2 301 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 MRPL32Q9BYC8 188 aaKnown RBP1.17□□□□□ -2.22
TRAV40-201ENST00000390467 PARP12Q9H0J9 701 aaKnown RBP1.17□□□□□ -2.22
TRAV40-201ENST00000390467 TCEAL2Q9H3H9 227 aaPredicted RBP1.17□□□□□ -2.22
TRAV40-201ENST00000390467 SND1-IT1Q9HBX3 110 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 RPRMQ9NS64 109 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 CA10Q9NS85 328 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 TAS2R8Q9NYW2 309 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 ZNF492Q9P255 531 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 RNF11Q9Y3C5 154 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 MPC1Q9Y5U8 109 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 TSPOAP1O95153 1857 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 RALGAPA2Q2PPJ7 1873 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 FER1L6Q2WGJ9 1857 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 HECW1Q76N89 1606 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 SETD1AO15047 1707 aaKnown RBP1.17□□□□□ -2.22
TRAV40-201ENST00000390467 GRIN2AQ12879 1464 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 TCOF1Q13428 1488 aaKnown RBP1.17□□□□□ -2.22
TRAV40-201ENST00000390467 MYH6P13533 1939 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 TICRRQ7Z2Z1 1910 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 ALPK3Q96L96 1907 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 KDM5AP29375 1690 aaKnown RBP1.16□□□□□ -2.22
TRAV40-201ENST00000390467 SNRNP200O75643 2136 aaKnown RBP1.16□□□□□ -2.22
TRAV40-201ENST00000390467 NAIPQ13075 1403 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 SCAPERQ9BY12 1400 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 RRBP1Q9P2E9 1410 aaKnown RBP1.16□□□□□ -2.22
TRAV40-201ENST00000390467 TRAPPC8Q9Y2L5 1435 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 MAP3K1Q13233 1512 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 TRAV27A0A087WT01 109 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 IGHV1-45A0A0A0MS14 117 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 A0A0D9SEW6 157 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 BBIP1A8MTZ0 92 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 B4DEV8 164 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 IGLL5B9A064 214 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 C9JQL5 133 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 NDUFC2-KCTD14E9PQ53 114 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 FNDC10F2Z333 226 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 H3BMG7 143 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 UBE2L6O14933 153 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 ZNF73O43830 326 aaPredicted RBP1.16□□□□□ -2.22
TRAV40-201ENST00000390467 OR2T1O43869 369 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 TNFP01375 233 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 IGKV1-5P01602 117 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 CTSDP07339 412 aaPredicted RBP1.16□□□□□ -2.22
TRAV40-201ENST00000390467 SPINK8P0C7L1 97 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 ZNF705DP0CH99 300 aaPredicted RBP1.16□□□□□ -2.22
TRAV40-201ENST00000390467 TRAPPC2P0DI81 140 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 TRAPPC2BP0DI82 140 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 GZMBP10144 247 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms