RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 IGHV3-13P01766 116 aa12.25□□□□□ -0.45
VLDLR-202ENST00000382099 LINC00312Q9Y6C7 94 aa12.25□□□□□ -0.45
VLDLR-202ENST00000382099 C2CD4DB7Z1M9 353 aa12.24□□□□□ -0.45
VLDLR-202ENST00000382099 FAM106CPP0CH98 169 aa12.24□□□□□ -0.45
VLDLR-202ENST00000382099 PYYP10082 97 aa12.24□□□□□ -0.45
VLDLR-202ENST00000382099 FAM106AQ4KMX7 169 aa12.24□□□□□ -0.45
VLDLR-202ENST00000382099 ZNF503Q96F45 646 aa12.24□□□□□ -0.45
VLDLR-202ENST00000382099 P0C879 139 aa12.24□□□□□ -0.45
VLDLR-202ENST00000382099 BRWD1-AS2P59051 145 aa12.24□□□□□ -0.45
VLDLR-202ENST00000382099 ERVK-16P61578 105 aa12.24□□□□□ -0.45
VLDLR-202ENST00000382099 SSBP2P81877 361 aaPredicted RBP12.24□□□□□ -0.45
VLDLR-202ENST00000382099 KLRD1Q13241 179 aa12.24□□□□□ -0.45
VLDLR-202ENST00000382099 TMSB15BA0A087X1C1 80 aa12.24□□□□□ -0.45
VLDLR-202ENST00000382099 TRAV3A0A0B4J244 114 aa12.24□□□□□ -0.45
VLDLR-202ENST00000382099 NPIPB6E9PJ23 425 aa12.24□□□□□ -0.45
VLDLR-202ENST00000382099 PEX7O00628 323 aa12.24□□□□□ -0.45
VLDLR-202ENST00000382099 FOXB1Q99853 325 aa12.24□□□□□ -0.45
VLDLR-202ENST00000382099 TM2D2Q9BX73 214 aa12.24□□□□□ -0.45
VLDLR-202ENST00000382099 TMEM140Q9NV12 185 aa12.24□□□□□ -0.45
VLDLR-202ENST00000382099 TCRBV4S1A1TA0A5B7 111 aa12.23□□□□□ -0.45
VLDLR-202ENST00000382099 GFRA3O60609 400 aa12.23□□□□□ -0.45
VLDLR-202ENST00000382099 NGFP01138 241 aa12.23□□□□□ -0.45
VLDLR-202ENST00000382099 RPP21Q9H633 154 aaKnown RBP12.23□□□□□ -0.45
VLDLR-202ENST00000382099 SLC25A10Q9UBX3 287 aaPredicted RBP12.23□□□□□ -0.45
VLDLR-202ENST00000382099 A0A096LPE4 126 aa12.23□□□□□ -0.45
VLDLR-202ENST00000382099 A0A1W2PPZ6 126 aa12.23□□□□□ -0.45
VLDLR-202ENST00000382099 OR2H2O95918 312 aa12.23□□□□□ -0.45
VLDLR-202ENST00000382099 TNFRSF18Q9Y5U5 241 aa12.23□□□□□ -0.45
VLDLR-202ENST00000382099 SPTY2D1-AS1A0A0U1RR47 76 aa12.22□□□□□ -0.45
VLDLR-202ENST00000382099 ATP5J2P56134 94 aa12.22□□□□□ -0.45
VLDLR-202ENST00000382099 ERVK11-1P61568 191 aa12.22□□□□□ -0.45
VLDLR-202ENST00000382099 LOXL1Q08397 574 aaPredicted RBP12.22□□□□□ -0.45
VLDLR-202ENST00000382099 C1orf159Q96HA4 380 aa12.22□□□□□ -0.45
VLDLR-202ENST00000382099 CCDC179H3BU77 68 aa12.22□□□□□ -0.45
VLDLR-202ENST00000382099 PLAUP00749 431 aa12.22□□□□□ -0.45
VLDLR-202ENST00000382099 C8orf88P0DMB2 117 aa12.22□□□□□ -0.45
VLDLR-202ENST00000382099 IFI27P40305 119 aaPredicted RBP12.22□□□□□ -0.45
VLDLR-202ENST00000382099 FAM231DQ6ZW35 169 aa12.22□□□□□ -0.45
VLDLR-202ENST00000382099 ZNF502Q8TBZ5 544 aa12.22□□□□□ -0.45
VLDLR-202ENST00000382099 PTH2Q96A98 100 aa12.22□□□□□ -0.45
VLDLR-202ENST00000382099 A0A1B0GX78 115 aa12.22□□□□□ -0.45
VLDLR-202ENST00000382099 hADV38S2A0JD32 116 aa12.22□□□□□ -0.45
VLDLR-202ENST00000382099 GAGE12JA6NER3 117 aa12.22□□□□□ -0.45
VLDLR-202ENST00000382099 E9PLD3 99 aa12.22□□□□□ -0.45
VLDLR-202ENST00000382099 FNDC10F2Z333 226 aa12.22□□□□□ -0.45
VLDLR-202ENST00000382099 GAGE7O76087 117 aa12.22□□□□□ -0.45
VLDLR-202ENST00000382099 SLC25A5P05141 298 aaKnown RBP12.22□□□□□ -0.45
VLDLR-202ENST00000382099 GAGE12FP0CL80 117 aa12.22□□□□□ -0.45
VLDLR-202ENST00000382099 GAGE12GP0CL81 117 aa12.22□□□□□ -0.45
VLDLR-202ENST00000382099 GAGE12IP0CL82 117 aa12.22□□□□□ -0.45
VLDLR-202ENST00000382099 GAGE4Q13068 117 aa12.22□□□□□ -0.45
VLDLR-202ENST00000382099 AAED1Q7RTV5 226 aa12.22□□□□□ -0.45
VLDLR-202ENST00000382099 TRBV6-6A0A0A6YYG2 114 aa12.21□□□□□ -0.45
VLDLR-202ENST00000382099 DKK2Q9UBU2 259 aa12.21□□□□□ -0.45
VLDLR-202ENST00000382099 CD27P26842 260 aa12.21□□□□□ -0.46
VLDLR-202ENST00000382099 ZNF146Q15072 292 aa12.21□□□□□ -0.46
VLDLR-202ENST00000382099 TCF19Q9Y242 345 aa12.21□□□□□ -0.46
VLDLR-202ENST00000382099 NPIPB11E5RHQ5 1161 aa12.2□□□□□ -0.46
VLDLR-202ENST00000382099 C3orf56Q8N813 242 aa12.2□□□□□ -0.46
VLDLR-202ENST00000382099 KIR2DL4Q99706 377 aa12.2□□□□□ -0.46
VLDLR-202ENST00000382099 SIGLEC8Q9NYZ4 499 aa12.2□□□□□ -0.46
VLDLR-202ENST00000382099 PI4KAP42356 2102 aa12.2□□□□□ -0.46
VLDLR-202ENST00000382099 RBPMS2Q6ZRY4 209 aaKnown RBP12.2□□□□□ -0.46
VLDLR-202ENST00000382099 ZBTB34Q8NCN2 500 aa12.2□□□□□ -0.46
VLDLR-202ENST00000382099 DNAJC13O75165 2243 aa12.2□□□□□ -0.46
VLDLR-202ENST00000382099 PRTN3P24158 256 aa12.2□□□□□ -0.46
VLDLR-202ENST00000382099 LTBRP36941 435 aa12.2□□□□□ -0.46
VLDLR-202ENST00000382099 MORN5Q5VZ52 161 aa12.2□□□□□ -0.46
VLDLR-202ENST00000382099 PCBD1P61457 104 aa12.19□□□□□ -0.46
VLDLR-202ENST00000382099 FHL3Q13643 280 aa12.19□□□□□ -0.46
VLDLR-202ENST00000382099 TTC32Q5I0X7 151 aa12.19□□□□□ -0.46
VLDLR-202ENST00000382099 Q6AWC8 147 aa12.19□□□□□ -0.46
VLDLR-202ENST00000382099 LOC107984156A0A0G2JMH3 177 aa12.19□□□□□ -0.46
VLDLR-202ENST00000382099 C10orf142B7Z368 130 aa12.19□□□□□ -0.46
VLDLR-202ENST00000382099 C12orf77C9JDV5 145 aa12.19□□□□□ -0.46
VLDLR-202ENST00000382099 PRRG2O14669 202 aa12.19□□□□□ -0.46
VLDLR-202ENST00000382099 PRB4P10163 310 aaPredicted RBP12.19□□□□□ -0.46
VLDLR-202ENST00000382099 COL8A1P27658 744 aa12.19□□□□□ -0.46
VLDLR-202ENST00000382099 PRR20EP86478 221 aa12.19□□□□□ -0.46
VLDLR-202ENST00000382099 PRR20CP86479 221 aa12.19□□□□□ -0.46
VLDLR-202ENST00000382099 PRR20DP86480 221 aa12.19□□□□□ -0.46
VLDLR-202ENST00000382099 PRR20BP86481 221 aa12.19□□□□□ -0.46
VLDLR-202ENST00000382099 PRR20AP86496 221 aa12.19□□□□□ -0.46
VLDLR-202ENST00000382099 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.19□□□□□ -0.46
VLDLR-202ENST00000382099 LINC00322Q6ZN03 302 aaPredicted RBP12.19□□□□□ -0.46
VLDLR-202ENST00000382099 ZNF497Q6ZNH5 498 aa12.19□□□□□ -0.46
VLDLR-202ENST00000382099 ARL17AQ8IVW1 177 aa12.19□□□□□ -0.46
VLDLR-202ENST00000382099 PIP4P2Q8N4L2 257 aa12.19□□□□□ -0.46
VLDLR-202ENST00000382099 OR5AN1Q8NGI8 311 aa12.19□□□□□ -0.46
VLDLR-202ENST00000382099 PRRG4Q9BZD6 226 aa12.19□□□□□ -0.46
VLDLR-202ENST00000382099 H3BVH4 76 aa12.18□□□□□ -0.46
VLDLR-202ENST00000382099 MLANAQ16655 118 aa12.18□□□□□ -0.46
VLDLR-202ENST00000382099 LGALS9BQ3B8N2 356 aa12.18□□□□□ -0.46
VLDLR-202ENST00000382099 LGALS9CQ6DKI2 356 aa12.18□□□□□ -0.46
VLDLR-202ENST00000382099 IGKV2D-26A0A0A0MRZ7 120 aa12.18□□□□□ -0.46
VLDLR-202ENST00000382099 H3BTX0 84 aa12.18□□□□□ -0.46
VLDLR-202ENST00000382099 MYOD1P15172 320 aa12.18□□□□□ -0.46
VLDLR-202ENST00000382099 PLP2Q04941 152 aa12.18□□□□□ -0.46
VLDLR-202ENST00000382099 CEND1Q8N111 149 aa12.18□□□□□ -0.46
VLDLR-202ENST00000382099 HIST1H4GQ99525 98 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms