RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 RAB14P61106 215 aa15.8■□□□□ 0.12
TSSC4-203ENST00000380996 FOXL1Q12952 345 aa15.8■□□□□ 0.12
TSSC4-203ENST00000380996 ZNF600Q6ZNG1 722 aa15.8■□□□□ 0.12
TSSC4-203ENST00000380996 OR51G1Q8NGK1 321 aa15.8■□□□□ 0.12
TSSC4-203ENST00000380996 C19orf24Q9BVV8 132 aa15.8■□□□□ 0.12
TSSC4-203ENST00000380996 PLA2G2EQ9NZK7 142 aa15.8■□□□□ 0.12
TSSC4-203ENST00000380996 NF1P21359 2839 aa15.8■□□□□ 0.12
TSSC4-203ENST00000380996 ANKRD34BA5PLL1 514 aa15.79■□□□□ 0.12
TSSC4-203ENST00000380996 YIF1AO95070 293 aa15.79■□□□□ 0.12
TSSC4-203ENST00000380996 LGALS1P09382 135 aaKnown RBP15.79■□□□□ 0.12
TSSC4-203ENST00000380996 TCTEX1D4Q5JR98 221 aa15.79■□□□□ 0.12
TSSC4-203ENST00000380996 OR10G4Q8NGN3 311 aa15.79■□□□□ 0.12
TSSC4-203ENST00000380996 OR10G9Q8NGN4 311 aa15.79■□□□□ 0.12
TSSC4-203ENST00000380996 OR10G7Q8NGN6 311 aa15.79■□□□□ 0.12
TSSC4-203ENST00000380996 OR1L4Q8NGR5 311 aa15.79■□□□□ 0.12
TSSC4-203ENST00000380996 OR5B12Q96R08 314 aa15.79■□□□□ 0.12
TSSC4-203ENST00000380996 KHDC1LQ5JSQ8 128 aa15.78■□□□□ 0.12
TSSC4-203ENST00000380996 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.78■□□□□ 0.12
TSSC4-203ENST00000380996 PFDN5Q99471 154 aa15.78■□□□□ 0.12
TSSC4-203ENST00000380996 VSIRQ9H7M9 311 aa15.78■□□□□ 0.12
TSSC4-203ENST00000380996 RPRMQ9NS64 109 aa15.78■□□□□ 0.12
TSSC4-203ENST00000380996 SETD2Q9BYW2 2564 aaPredicted RBP15.78■□□□□ 0.12
TSSC4-203ENST00000380996 ELOA3CA0A087WX78 387 aaPredicted RBP15.78■□□□□ 0.12
TSSC4-203ENST00000380996 ZNF705EA8MWA4 302 aaPredicted RBP15.78■□□□□ 0.12
TSSC4-203ENST00000380996 PPP5D1E7EU14 171 aa15.78■□□□□ 0.12
TSSC4-203ENST00000380996 COX7A2P2O60397 106 aa15.78■□□□□ 0.12
TSSC4-203ENST00000380996 GGCTO75223 188 aaKnown RBP15.78■□□□□ 0.12
TSSC4-203ENST00000380996 OR2C1O95371 312 aa15.78■□□□□ 0.12
TSSC4-203ENST00000380996 PLP1P60201 277 aa15.78■□□□□ 0.12
TSSC4-203ENST00000380996 RAB2AP61019 212 aa15.78■□□□□ 0.12
TSSC4-203ENST00000380996 FAM213BQ8TBF2 198 aa15.78■□□□□ 0.12
TSSC4-203ENST00000380996 GATAD1Q8WUU5 269 aa15.78■□□□□ 0.12
TSSC4-203ENST00000380996 SAT2Q96F10 170 aaPredicted RBP15.78■□□□□ 0.12
TSSC4-203ENST00000380996 DNAJC4Q9NNZ3 241 aa15.78■□□□□ 0.12
TSSC4-203ENST00000380996 HYPMO75409 117 aa15.77■□□□□ 0.11
TSSC4-203ENST00000380996 IL4P05112 153 aa15.77■□□□□ 0.11
TSSC4-203ENST00000380996 CD28P10747 220 aa15.77■□□□□ 0.11
TSSC4-203ENST00000380996 ORM2P19652 201 aa15.77■□□□□ 0.11
TSSC4-203ENST00000380996 LYZP61626 148 aa15.77■□□□□ 0.11
TSSC4-203ENST00000380996 BLOC1S1P78537 153 aa15.77■□□□□ 0.11
TSSC4-203ENST00000380996 GCSAMLQ5JQS6 135 aa15.77■□□□□ 0.11
TSSC4-203ENST00000380996 C4orf3Q8WVX3 66 aa15.77■□□□□ 0.11
TSSC4-203ENST00000380996 RNF2Q99496 336 aa15.77■□□□□ 0.11
TSSC4-203ENST00000380996 ACTR3CQ9C0K3 210 aaPredicted RBP15.77■□□□□ 0.11
TSSC4-203ENST00000380996 PUS1Q9Y606 427 aaKnown RBP eCLIP15.77■□□□□ 0.11
TSSC4-203ENST00000380996 NIPBLQ6KC79 2804 aaeCLIP15.76■□□□□ 0.11
TSSC4-203ENST00000380996 A0A1W2PPV4 95 aa15.76■□□□□ 0.11
TSSC4-203ENST00000380996 TRBV12-3P01733 135 aa15.76■□□□□ 0.11
TSSC4-203ENST00000380996 OR5G3P0C626 314 aa15.76■□□□□ 0.11
TSSC4-203ENST00000380996 S100A7AQ86SG5 101 aa15.76■□□□□ 0.11
TSSC4-203ENST00000380996 RPP25LQ8N5L8 163 aaKnown RBP15.76■□□□□ 0.11
TSSC4-203ENST00000380996 OR1B1Q8NGR6 318 aa15.76■□□□□ 0.11
TSSC4-203ENST00000380996 RNF125Q96EQ8 232 aa15.76■□□□□ 0.11
TSSC4-203ENST00000380996 TSSC4Q9Y5U2 329 aaPredicted RBP15.76■□□□□ 0.11
TSSC4-203ENST00000380996 WI2-2373I1.2A0A1W2PRP0 233 aa15.75■□□□□ 0.11
TSSC4-203ENST00000380996 I3L521 148 aa15.75■□□□□ 0.11
TSSC4-203ENST00000380996 BMPR1BO00238 502 aa15.75■□□□□ 0.11
TSSC4-203ENST00000380996 FHITP49789 147 aa15.75■□□□□ 0.11
TSSC4-203ENST00000380996 RHOBP62745 196 aa15.75■□□□□ 0.11
TSSC4-203ENST00000380996 C10orf113Q5VZT2 155 aa15.75■□□□□ 0.11
TSSC4-203ENST00000380996 PBDC1Q9BVG4 233 aa15.75■□□□□ 0.11
TSSC4-203ENST00000380996 DOK5Q9P104 306 aa15.75■□□□□ 0.11
TSSC4-203ENST00000380996 C2CD3Q4AC94 2353 aa15.75■□□□□ 0.11
TSSC4-203ENST00000380996 IGHV3-35A0A0C4DH35 117 aa15.74■□□□□ 0.11
TSSC4-203ENST00000380996 NDUFA4O00483 81 aa15.74■□□□□ 0.11
TSSC4-203ENST00000380996 HSPB1P04792 205 aaKnown RBP15.74■□□□□ 0.11
TSSC4-203ENST00000380996 S100A7P31151 101 aa15.74■□□□□ 0.11
TSSC4-203ENST00000380996 FAM122CQ6P4D5 195 aa15.74■□□□□ 0.11
TSSC4-203ENST00000380996 TOMM20LQ6UXN7 152 aa15.74■□□□□ 0.11
TSSC4-203ENST00000380996 C11orf44Q8N8P7 122 aa15.74■□□□□ 0.11
TSSC4-203ENST00000380996 HIGD1AQ9Y241 93 aa15.74■□□□□ 0.11
TSSC4-203ENST00000380996 NUDT19A8MXV4 375 aa15.73■□□□□ 0.11
TSSC4-203ENST00000380996 SEC14L6B5MCN3 397 aa15.73■□□□□ 0.11
TSSC4-203ENST00000380996 CDC34P49427 236 aaPredicted RBP15.73■□□□□ 0.11
TSSC4-203ENST00000380996 CLLU1Q5K131 121 aa15.73■□□□□ 0.11
TSSC4-203ENST00000380996 FAM78BQ5VT40 261 aa15.73■□□□□ 0.11
TSSC4-203ENST00000380996 KLHL30-AS1Q8NEE0 82 aa15.73■□□□□ 0.11
TSSC4-203ENST00000380996 TMEM37Q8WXS4 190 aa15.73■□□□□ 0.11
TSSC4-203ENST00000380996 RCC1LQ96I51 464 aaKnown RBP15.73■□□□□ 0.11
TSSC4-203ENST00000380996 MRPL32Q9BYC8 188 aaKnown RBP15.73■□□□□ 0.11
TSSC4-203ENST00000380996 JMJD1CQ15652 2540 aa15.73■□□□□ 0.11
TSSC4-203ENST00000380996 CTXND1A0A1B0GTU2 59 aa15.73■□□□□ 0.11
TSSC4-203ENST00000380996 NMBP08949 121 aa15.73■□□□□ 0.11
TSSC4-203ENST00000380996 H2AFB1P0C5Y9 115 aa15.73■□□□□ 0.11
TSSC4-203ENST00000380996 RPEL1Q2QD12 228 aa15.73■□□□□ 0.11
TSSC4-203ENST00000380996 FAM106AQ4KMX7 169 aa15.73■□□□□ 0.11
TSSC4-203ENST00000380996 CITED2Q99967 270 aaPredicted RBP15.73■□□□□ 0.11
TSSC4-203ENST00000380996 MRPL27Q9P0M9 148 aaKnown RBP15.73■□□□□ 0.11
TSSC4-203ENST00000380996 TEX46H3BTG2 121 aa15.72■□□□□ 0.11
TSSC4-203ENST00000380996 ZP3P21754 424 aa15.72■□□□□ 0.11
TSSC4-203ENST00000380996 PATE2Q6UY27 113 aa15.72■□□□□ 0.11
TSSC4-203ENST00000380996 GPHB5Q86YW7 130 aa15.72■□□□□ 0.11
TSSC4-203ENST00000380996 RAB24Q969Q5 203 aa15.72■□□□□ 0.11
TSSC4-203ENST00000380996 SLC25A22Q9H936 323 aa15.72■□□□□ 0.11
TSSC4-203ENST00000380996 SEPSECSQ9HD40 501 aaKnown RBP15.72■□□□□ 0.11
TSSC4-203ENST00000380996 PFDN2Q9UHV9 154 aa15.72■□□□□ 0.11
TSSC4-203ENST00000380996 FUT9Q9Y231 359 aa15.72■□□□□ 0.11
TSSC4-203ENST00000380996 USF2Q15853 346 aaPredicted RBP15.71■□□□□ 0.11
TSSC4-203ENST00000380996 LINC00305Q7Z4B0 112 aa15.71■□□□□ 0.11
TSSC4-203ENST00000380996 SFT2D1Q8WV19 159 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms