RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 PSG3Q16557 428 aa14.11□□□□□ -0.15
COL4A3BP-203ENST00000380494 C2orf82Q6UX34 121 aa14.11□□□□□ -0.15
COL4A3BP-203ENST00000380494 LOC285556D6RIA3 1793 aa14.1□□□□□ -0.15
COL4A3BP-203ENST00000380494 C9orf118A6NHY6 69 aa14.1□□□□□ -0.15
COL4A3BP-203ENST00000380494 DUSP14O95147 198 aaKnown RBP14.1□□□□□ -0.15
COL4A3BP-203ENST00000380494 CDKN1AP38936 164 aa14.1□□□□□ -0.15
COL4A3BP-203ENST00000380494 FAM201AQ5SY85 155 aa14.1□□□□□ -0.15
COL4A3BP-203ENST00000380494 MRPL14Q6P1L8 145 aaKnown RBP14.1□□□□□ -0.15
COL4A3BP-203ENST00000380494 COL4A5P29400 1685 aa14.1□□□□□ -0.15
COL4A3BP-203ENST00000380494 LOC102723996A0A087X1L8 192 aa14.1□□□□□ -0.15
COL4A3BP-203ENST00000380494 PNRC2Q9NPJ4 139 aaKnown RBP14.1□□□□□ -0.15
COL4A3BP-203ENST00000380494 IGHV3-49A0A0A0MS15 119 aa14.1□□□□□ -0.15
COL4A3BP-203ENST00000380494 SPAARA0A1B0GVQ0 90 aa14.1□□□□□ -0.15
COL4A3BP-203ENST00000380494 RFNGQ9Y644 331 aa14.1□□□□□ -0.15
COL4A3BP-203ENST00000380494 TRAV8-1A0A0A6YYK1 113 aa14.1□□□□□ -0.15
COL4A3BP-203ENST00000380494 CELA3BP08861 270 aa14.1□□□□□ -0.15
COL4A3BP-203ENST00000380494 TMEM42Q69YG0 159 aa14.1□□□□□ -0.15
COL4A3BP-203ENST00000380494 TOMM7Q9P0U1 55 aa14.1□□□□□ -0.15
COL4A3BP-203ENST00000380494 C17orf100A8MU93 164 aa14.09□□□□□ -0.15
COL4A3BP-203ENST00000380494 SELLP14151 372 aa14.09□□□□□ -0.15
COL4A3BP-203ENST00000380494 ANAPC10Q9UM13 185 aa14.09□□□□□ -0.15
COL4A3BP-203ENST00000380494 ZNF562Q6V9R5 426 aa14.09□□□□□ -0.15
COL4A3BP-203ENST00000380494 ZNF329Q86UD4 541 aa14.09□□□□□ -0.15
COL4A3BP-203ENST00000380494 NPFFR1Q9GZQ6 430 aa14.09□□□□□ -0.15
COL4A3BP-203ENST00000380494 FAM231BA6NCW3 169 aa14.08□□□□□ -0.15
COL4A3BP-203ENST00000380494 MLNRO43193 412 aa14.08□□□□□ -0.15
COL4A3BP-203ENST00000380494 IGLC2P0DOY2 106 aa14.08□□□□□ -0.15
COL4A3BP-203ENST00000380494 IGLC3P0DOY3 106 aa14.08□□□□□ -0.15
COL4A3BP-203ENST00000380494 LILRA1O75019 489 aa14.08□□□□□ -0.16
COL4A3BP-203ENST00000380494 SDK1Q7Z5N4 2213 aa14.08□□□□□ -0.16
COL4A3BP-203ENST00000380494 FOXF2Q12947 444 aa14.08□□□□□ -0.16
COL4A3BP-203ENST00000380494 ZNF492Q9P255 531 aa14.08□□□□□ -0.16
COL4A3BP-203ENST00000380494 E9PQ18 207 aa14.08□□□□□ -0.16
COL4A3BP-203ENST00000380494 F8W1H4 67 aa14.08□□□□□ -0.16
COL4A3BP-203ENST00000380494 GFRA3O60609 400 aa14.07□□□□□ -0.16
COL4A3BP-203ENST00000380494 CDKN1BP46527 198 aa14.07□□□□□ -0.16
COL4A3BP-203ENST00000380494 MYOD1P15172 320 aa14.07□□□□□ -0.16
COL4A3BP-203ENST00000380494 TRIP12Q14669 1992 aaPredicted RBP14.07□□□□□ -0.16
COL4A3BP-203ENST00000380494 K7EP34 96 aa14.07□□□□□ -0.16
COL4A3BP-203ENST00000380494 SH2D1AO60880 128 aa14.07□□□□□ -0.16
COL4A3BP-203ENST00000380494 NTF4P34130 210 aa14.07□□□□□ -0.16
COL4A3BP-203ENST00000380494 PDCD11Q14690 1871 aaKnown RBP14.07□□□□□ -0.16
COL4A3BP-203ENST00000380494 NCR2O95944 276 aa14.07□□□□□ -0.16
COL4A3BP-203ENST00000380494 YPEL3P61236 119 aaPredicted RBP14.07□□□□□ -0.16
COL4A3BP-203ENST00000380494 CT83Q5H943 113 aa14.07□□□□□ -0.16
COL4A3BP-203ENST00000380494 KLF12Q9Y4X4 402 aa14.07□□□□□ -0.16
COL4A3BP-203ENST00000380494 MTCL1Q9Y4B5 1905 aaKnown RBP14.07□□□□□ -0.16
COL4A3BP-203ENST00000380494 ASCL4Q6XD76 172 aa14.06□□□□□ -0.16
COL4A3BP-203ENST00000380494 LINC01587Q99440 93 aa14.06□□□□□ -0.16
COL4A3BP-203ENST00000380494 C15orf62A8K5M9 175 aa14.06□□□□□ -0.16
COL4A3BP-203ENST00000380494 MBNL3Q9NUK0 354 aaKnown RBP14.06□□□□□ -0.16
COL4A3BP-203ENST00000380494 CCL3L1P16619 93 aa14.06□□□□□ -0.16
COL4A3BP-203ENST00000380494 RNF5Q99942 180 aa14.06□□□□□ -0.16
COL4A3BP-203ENST00000380494 URB1O60287 2271 aaKnown RBP14.06□□□□□ -0.16
COL4A3BP-203ENST00000380494 NPIPB5A8MRT5 1133 aa14.06□□□□□ -0.16
COL4A3BP-203ENST00000380494 C18orf32Q8TCD1 76 aa14.06□□□□□ -0.16
COL4A3BP-203ENST00000380494 CENPVQ7Z7K6 275 aaPredicted RBP14.05□□□□□ -0.16
COL4A3BP-203ENST00000380494 BMPERQ8N8U9 685 aa14.05□□□□□ -0.16
COL4A3BP-203ENST00000380494 TMEM167AQ8TBQ9 72 aa14.05□□□□□ -0.16
COL4A3BP-203ENST00000380494 DOCK4Q8N1I0 1966 aa14.05□□□□□ -0.16
COL4A3BP-203ENST00000380494 DPH3P1Q9H4G8 78 aa14.05□□□□□ -0.16
COL4A3BP-203ENST00000380494 RPUSD1Q9UJJ7 312 aaKnown RBP14.05□□□□□ -0.16
COL4A3BP-203ENST00000380494 SPAG17Q6Q759 2223 aa14.05□□□□□ -0.16
COL4A3BP-203ENST00000380494 PPIFP30405 207 aaKnown RBP14.05□□□□□ -0.16
COL4A3BP-203ENST00000380494 PHLDA1Q8WV24 401 aaPredicted RBP14.05□□□□□ -0.16
COL4A3BP-203ENST00000380494 TRBV20-1A0A075B6N2 111 aa14.04□□□□□ -0.16
COL4A3BP-203ENST00000380494 SIGLEC15Q6ZMC9 328 aa14.04□□□□□ -0.16
COL4A3BP-203ENST00000380494 TMEM86BQ8N661 226 aa14.04□□□□□ -0.16
COL4A3BP-203ENST00000380494 PLXNA1Q9UIW2 1896 aa14.04□□□□□ -0.16
COL4A3BP-203ENST00000380494 BSPH1Q075Z2 132 aa14.04□□□□□ -0.16
COL4A3BP-203ENST00000380494 TMEM158Q8WZ71 300 aa14.04□□□□□ -0.16
COL4A3BP-203ENST00000380494 IGKV2-40A0A087WW87 121 aaPredicted RBP14.04□□□□□ -0.16
COL4A3BP-203ENST00000380494 IGKV2D-40P01614 121 aaPredicted RBP14.04□□□□□ -0.16
COL4A3BP-203ENST00000380494 ZC2HC1BQ5TFG8 222 aa14.04□□□□□ -0.16
COL4A3BP-203ENST00000380494 PMS2P5A8MQ11 134 aa14.04□□□□□ -0.16
COL4A3BP-203ENST00000380494 PEMTQ9UBM1 199 aa14.04□□□□□ -0.16
COL4A3BP-203ENST00000380494 IGHV2-26A0A0B4J1V2 119 aa14.04□□□□□ -0.16
COL4A3BP-203ENST00000380494 Q86TA4 180 aa14.04□□□□□ -0.16
COL4A3BP-203ENST00000380494 LIME1Q9H400 295 aa14.04□□□□□ -0.16
COL4A3BP-203ENST00000380494 Q6ZWC4 215 aa14.03□□□□□ -0.16
COL4A3BP-203ENST00000380494 EXOC3-AS1Q8N2X6 119 aa14.03□□□□□ -0.16
COL4A3BP-203ENST00000380494 FGFBP3Q8TAT2 258 aa14.03□□□□□ -0.16
COL4A3BP-203ENST00000380494 PIKFYVEQ9Y2I7 2098 aa14.03□□□□□ -0.16
COL4A3BP-203ENST00000380494 VCYO14598 125 aa14.03□□□□□ -0.16
COL4A3BP-203ENST00000380494 CD33P20138 364 aa14.03□□□□□ -0.16
COL4A3BP-203ENST00000380494 TEX43Q6ZNM6 134 aa14.03□□□□□ -0.16
COL4A3BP-203ENST00000380494 EDA2RQ9HAV5 297 aa14.03□□□□□ -0.16
COL4A3BP-203ENST00000380494 SCRT1Q9BWW7 348 aa14.03□□□□□ -0.16
COL4A3BP-203ENST00000380494 SIPA1L1O43166 1804 aa14.03□□□□□ -0.16
COL4A3BP-203ENST00000380494 RSPO3Q9BXY4 272 aaPredicted RBP14.02□□□□□ -0.16
COL4A3BP-203ENST00000380494 SRRM5B3KS81 715 aa14.02□□□□□ -0.16
COL4A3BP-203ENST00000380494 K7EP13 123 aa14.02□□□□□ -0.16
COL4A3BP-203ENST00000380494 FAM27E3Q08E93 113 aa14.02□□□□□ -0.17
COL4A3BP-203ENST00000380494 Q6P435 159 aa14.02□□□□□ -0.17
COL4A3BP-203ENST00000380494 PPDPFLQ8WWR9 84 aa14.02□□□□□ -0.17
COL4A3BP-203ENST00000380494 ATP6V0BQ99437 205 aa14.02□□□□□ -0.17
COL4A3BP-203ENST00000380494 CRPP02741 224 aa14.02□□□□□ -0.17
COL4A3BP-203ENST00000380494 CLPSP04118 112 aa14.02□□□□□ -0.17
COL4A3BP-203ENST00000380494 FOXL2NBQ6ZUU3 175 aa14.01□□□□□ -0.17
COL4A3BP-203ENST00000380494 PLSCR4Q9NRQ2 329 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 176.6 ms