RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 RASL11AQ6T310 242 aa12.51□□□□□ -0.41
EXT1-201ENST00000378204 ZIC4Q8N9L1 334 aa12.51□□□□□ -0.41
EXT1-201ENST00000378204 SNHG12Q9BXW3 62 aa12.51□□□□□ -0.41
EXT1-201ENST00000378204 RPP21Q9H633 154 aaKnown RBP12.51□□□□□ -0.41
EXT1-201ENST00000378204 DUX3Q96PT4 197 aa12.5□□□□□ -0.41
EXT1-201ENST00000378204 RTBDNQ9BSG5 229 aaPredicted RBP12.5□□□□□ -0.41
EXT1-201ENST00000378204 SIPA1L1O43166 1804 aa12.5□□□□□ -0.41
EXT1-201ENST00000378204 IGHV3-66A0A0C4DH42 116 aa12.5□□□□□ -0.41
EXT1-201ENST00000378204 A0A0G2JK05 382 aa12.5□□□□□ -0.41
EXT1-201ENST00000378204 IQCF6A8MYZ5 107 aa12.5□□□□□ -0.41
EXT1-201ENST00000378204 IGHV3-23P01764 117 aa12.5□□□□□ -0.41
EXT1-201ENST00000378204 PHLDA1Q8WV24 401 aaPredicted RBP12.5□□□□□ -0.41
EXT1-201ENST00000378204 PPDPFLQ8WWR9 84 aa12.5□□□□□ -0.41
EXT1-201ENST00000378204 C20orf144Q9BQM9 153 aa12.5□□□□□ -0.41
EXT1-201ENST00000378204 HIGD1CA8MV81 97 aa12.5□□□□□ -0.41
EXT1-201ENST00000378204 RNF182Q8N6D2 247 aa12.5□□□□□ -0.41
EXT1-201ENST00000378204 PAX1P15863 534 aa12.5□□□□□ -0.41
EXT1-201ENST00000378204 CNTFRP26992 372 aa12.5□□□□□ -0.41
EXT1-201ENST00000378204 MSGN1A6NI15 193 aa12.49□□□□□ -0.41
EXT1-201ENST00000378204 CELA3AP09093 270 aa12.49□□□□□ -0.41
EXT1-201ENST00000378204 COQ2Q96H96 371 aa12.49□□□□□ -0.41
EXT1-201ENST00000378204 MUC21A0A0G2JKD1 596 aa12.49□□□□□ -0.41
EXT1-201ENST00000378204 MUC21A0A140T8X8 626 aa12.49□□□□□ -0.41
EXT1-201ENST00000378204 IGKCP01834 107 aa12.49□□□□□ -0.41
EXT1-201ENST00000378204 MUC21Q5SSG8 566 aa12.49□□□□□ -0.41
EXT1-201ENST00000378204 ZNF114Q8NC26 417 aa12.49□□□□□ -0.41
EXT1-201ENST00000378204 EML6Q6ZMW3 1958 aa12.49□□□□□ -0.41
EXT1-201ENST00000378204 M0R2P5 195 aa12.49□□□□□ -0.41
EXT1-201ENST00000378204 OVOL2Q9BRP0 275 aa12.49□□□□□ -0.41
EXT1-201ENST00000378204 ITLN2Q8WWU7 325 aaPredicted RBP12.49□□□□□ -0.41
EXT1-201ENST00000378204 CSRP2Q16527 193 aa12.49□□□□□ -0.41
EXT1-201ENST00000378204 FNDC1Q4ZHG4 1894 aaPredicted RBP12.49□□□□□ -0.41
EXT1-201ENST00000378204 IGKV1D-43A0A0B4J1Z2 117 aa12.49□□□□□ -0.41
EXT1-201ENST00000378204 C17orf100A8MU93 164 aa12.49□□□□□ -0.41
EXT1-201ENST00000378204 Q9H3A6 140 aa12.49□□□□□ -0.41
EXT1-201ENST00000378204 OR13A1Q8NGR1 328 aa12.48□□□□□ -0.41
EXT1-201ENST00000378204 A0A0G2JMZ2 1700 aa12.48□□□□□ -0.41
EXT1-201ENST00000378204 LRRC37A2A6NM11 1700 aa12.48□□□□□ -0.41
EXT1-201ENST00000378204 SHISA3A0PJX4 238 aa12.48□□□□□ -0.41
EXT1-201ENST00000378204 IGHV1-2P23083 117 aa12.48□□□□□ -0.41
EXT1-201ENST00000378204 YPEL1O60688 119 aa12.48□□□□□ -0.41
EXT1-201ENST00000378204 FAM57AQ8TBR7 257 aa12.48□□□□□ -0.41
EXT1-201ENST00000378204 YPEL2Q96QA6 119 aa12.48□□□□□ -0.41
EXT1-201ENST00000378204 J3KT08 172 aa12.48□□□□□ -0.41
EXT1-201ENST00000378204 VKORC1Q9BQB6 163 aa12.48□□□□□ -0.41
EXT1-201ENST00000378204 FGF16O43320 207 aa12.48□□□□□ -0.41
EXT1-201ENST00000378204 RSPO4Q2I0M5 234 aaPredicted RBP12.48□□□□□ -0.41
EXT1-201ENST00000378204 S4R3C0 116 aa12.48□□□□□ -0.41
EXT1-201ENST00000378204 FAM216BQ8N7L0 139 aa12.48□□□□□ -0.41
EXT1-201ENST00000378204 IMMP1LQ96LU5 166 aa12.47□□□□□ -0.41
EXT1-201ENST00000378204 MYOD1P15172 320 aa12.47□□□□□ -0.41
EXT1-201ENST00000378204 LINC00114Q6XXX2 140 aa12.47□□□□□ -0.41
EXT1-201ENST00000378204 A0A087X0K7 114 aa12.47□□□□□ -0.41
EXT1-201ENST00000378204 IGLV3-19P01714 112 aa12.47□□□□□ -0.41
EXT1-201ENST00000378204 CLEC19AQ6UXS0 136 aa12.47□□□□□ -0.41
EXT1-201ENST00000378204 KLHDC3Q9BQ90 382 aa12.47□□□□□ -0.41
EXT1-201ENST00000378204 RHOGP84095 191 aa12.47□□□□□ -0.41
EXT1-201ENST00000378204 ASCL2Q99929 193 aa12.47□□□□□ -0.41
EXT1-201ENST00000378204 MRPL20Q9BYC9 149 aaKnown RBP12.47□□□□□ -0.41
EXT1-201ENST00000378204 CD5P06127 495 aa12.47□□□□□ -0.41
EXT1-201ENST00000378204 LEPP41159 167 aa12.47□□□□□ -0.41
EXT1-201ENST00000378204 ABHD17AQ96GS6 310 aa12.47□□□□□ -0.41
EXT1-201ENST00000378204 IGFBP3P17936 291 aaPredicted RBP12.46□□□□□ -0.41
EXT1-201ENST00000378204 RNASE4P34096 147 aaKnown RBP12.46□□□□□ -0.41
EXT1-201ENST00000378204 NAA38Q9BRA0 125 aaKnown RBP12.46□□□□□ -0.41
EXT1-201ENST00000378204 FAM201AQ5SY85 155 aa12.46□□□□□ -0.42
EXT1-201ENST00000378204 C19orf48Q6RUI8 117 aa12.46□□□□□ -0.42
EXT1-201ENST00000378204 FABP5P3A8MUU1 101 aa12.46□□□□□ -0.42
EXT1-201ENST00000378204 C7orf69Q9H7B7 122 aa12.46□□□□□ -0.42
EXT1-201ENST00000378204 ATP5G3P48201 142 aa12.45□□□□□ -0.42
EXT1-201ENST00000378204 A0A1B0GTI1 187 aa12.45□□□□□ -0.42
EXT1-201ENST00000378204 F8VVB4 439 aa12.45□□□□□ -0.42
EXT1-201ENST00000378204 F8VWA3 439 aa12.45□□□□□ -0.42
EXT1-201ENST00000378204 TDGF1P13385 188 aa12.45□□□□□ -0.42
EXT1-201ENST00000378204 SPXQ9BT56 116 aa12.45□□□□□ -0.42
EXT1-201ENST00000378204 LINC01587Q99440 93 aa12.45□□□□□ -0.42
EXT1-201ENST00000378204 TEX38Q6PEX7 206 aa12.45□□□□□ -0.42
EXT1-201ENST00000378204 ZNF525Q8N782 197 aa12.45□□□□□ -0.42
EXT1-201ENST00000378204 CHTOPQ9Y3Y2 248 aaKnown RBP12.45□□□□□ -0.42
EXT1-201ENST00000378204 TRBV6-7A0A0A0MS04 114 aa12.45□□□□□ -0.42
EXT1-201ENST00000378204 C9orf118A6NHY6 69 aa12.45□□□□□ -0.42
EXT1-201ENST00000378204 OTORQ9NRC9 128 aa12.45□□□□□ -0.42
EXT1-201ENST00000378204 PEMTQ9UBM1 199 aa12.45□□□□□ -0.42
EXT1-201ENST00000378204 NBR2O15453 112 aa12.45□□□□□ -0.42
EXT1-201ENST00000378204 MIR17HGQ75NE6 70 aa12.45□□□□□ -0.42
EXT1-201ENST00000378204 PLXNB1O43157 2135 aa12.45□□□□□ -0.42
EXT1-201ENST00000378204 PTPRQQ9UMZ3 2332 aa12.45□□□□□ -0.42
EXT1-201ENST00000378204 C1orf122Q6ZSJ8 110 aa12.44□□□□□ -0.42
EXT1-201ENST00000378204 LINC01549A6NIU2 74 aa12.44□□□□□ -0.42
EXT1-201ENST00000378204 ZNF497Q6ZNH5 498 aa12.44□□□□□ -0.42
EXT1-201ENST00000378204 TOMM7Q9P0U1 55 aa12.44□□□□□ -0.42
EXT1-201ENST00000378204 RNF222A6NCQ9 220 aa12.44□□□□□ -0.42
EXT1-201ENST00000378204 C15orf61A6NNL5 157 aa12.44□□□□□ -0.42
EXT1-201ENST00000378204 SMAD7O15105 426 aaKnown RBP12.44□□□□□ -0.42
EXT1-201ENST00000378204 CELA3BP08861 270 aa12.44□□□□□ -0.42
EXT1-201ENST00000378204 CXCL1P09341 107 aa12.44□□□□□ -0.42
EXT1-201ENST00000378204 CCL20P78556 96 aa12.44□□□□□ -0.42
EXT1-201ENST00000378204 GUSBP1Q15486 140 aa12.44□□□□□ -0.42
EXT1-201ENST00000378204 SRSF3P84103 164 aaKnown RBP12.44□□□□□ -0.42
EXT1-201ENST00000378204 IFI27L1Q96BM0 104 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms