RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 FBXL7Q9UJT9 491 aa11.76□□□□□ -0.53
NEK2-201ENST00000366998 F6UZH7 168 aa11.76□□□□□ -0.53
NEK2-201ENST00000366998 G3V318 75 aa11.76□□□□□ -0.53
NEK2-201ENST00000366998 IGKV1-17P01599 117 aa11.76□□□□□ -0.53
NEK2-201ENST00000366998 IGHV3-23P01764 117 aa11.76□□□□□ -0.53
NEK2-201ENST00000366998 AMY1AP04745 511 aa11.76□□□□□ -0.53
NEK2-201ENST00000366998 RD3LP0DJH9 198 aa11.76□□□□□ -0.53
NEK2-201ENST00000366998 HIST1H1BP16401 226 aaKnown RBP11.76□□□□□ -0.53
NEK2-201ENST00000366998 UBE2L3P68036 154 aaKnown RBP11.76□□□□□ -0.53
NEK2-201ENST00000366998 OR51G1Q8NGK1 321 aa11.76□□□□□ -0.53
NEK2-201ENST00000366998 FAM167A-AS1Q96KT0 104 aa11.76□□□□□ -0.53
NEK2-201ENST00000366998 SMCO4Q9NRQ5 59 aa11.76□□□□□ -0.53
NEK2-201ENST00000366998 C21orf62Q9NYP8 219 aa11.76□□□□□ -0.53
NEK2-201ENST00000366998 PITPNC1Q9UKF7 332 aa11.76□□□□□ -0.53
NEK2-201ENST00000366998 HELZ2Q9BYK8 2649 aaKnown RBP11.75□□□□□ -0.53
NEK2-201ENST00000366998 C16orf82Q7Z2V1 217 aa11.75□□□□□ -0.53
NEK2-201ENST00000366998 BCL6BQ8N143 479 aaPredicted RBP11.75□□□□□ -0.53
NEK2-201ENST00000366998 TMEM68Q96MH6 324 aa11.75□□□□□ -0.53
NEK2-201ENST00000366998 PAXXQ9BUH6 204 aa11.75□□□□□ -0.53
NEK2-201ENST00000366998 CSPG4Q6UVK1 2322 aa11.75□□□□□ -0.53
NEK2-201ENST00000366998 TRAV30A0A087WSZ9 112 aa11.74□□□□□ -0.53
NEK2-201ENST00000366998 PYYP10082 97 aa11.74□□□□□ -0.53
NEK2-201ENST00000366998 PLP1P60201 277 aa11.74□□□□□ -0.53
NEK2-201ENST00000366998 DEFB112Q30KQ8 113 aa11.74□□□□□ -0.53
NEK2-201ENST00000366998 NAT8Q9UHE5 227 aa11.74□□□□□ -0.53
NEK2-201ENST00000366998 HIGD1AQ9Y241 93 aa11.74□□□□□ -0.53
NEK2-201ENST00000366998 SCO2A0A1W2PP80 73 aa11.74□□□□□ -0.53
NEK2-201ENST00000366998 NPPCP23582 126 aa11.74□□□□□ -0.53
NEK2-201ENST00000366998 PNRC1Q12796 327 aaPredicted RBP11.74□□□□□ -0.53
NEK2-201ENST00000366998 OR51M1Q9H341 326 aa11.74□□□□□ -0.53
NEK2-201ENST00000366998 SDF2L1Q9HCN8 221 aa11.74□□□□□ -0.53
NEK2-201ENST00000366998 ARL2-SNX15V9GYD0 113 aa11.74□□□□□ -0.53
NEK2-201ENST00000366998 ZANQ9Y493 2812 aa11.74□□□□□ -0.53
NEK2-201ENST00000366998 NBPF19A0A087WUL8 3843 aa11.73□□□□□ -0.53
NEK2-201ENST00000366998 TRAV41A0A0B4J266 112 aa11.73□□□□□ -0.53
NEK2-201ENST00000366998 M0QZK8 103 aa11.73□□□□□ -0.53
NEK2-201ENST00000366998 NDUFB4O95168 129 aa11.73□□□□□ -0.53
NEK2-201ENST00000366998 TOMM40O96008 361 aa11.73□□□□□ -0.53
NEK2-201ENST00000366998 RHOGP84095 191 aa11.73□□□□□ -0.53
NEK2-201ENST00000366998 ADIRFQ15847 76 aa11.73□□□□□ -0.53
NEK2-201ENST00000366998 TMEM241Q24JQ0 296 aa11.73□□□□□ -0.53
NEK2-201ENST00000366998 CYB5R2Q6BCY4 276 aa11.73□□□□□ -0.53
NEK2-201ENST00000366998 ZNF48Q96MX3 618 aaPredicted RBP11.73□□□□□ -0.53
NEK2-201ENST00000366998 LINC00527Q9UJ94 153 aa11.73□□□□□ -0.53
NEK2-201ENST00000366998 PRRC2AP48634 2157 aaKnown RBP11.73□□□□□ -0.53
NEK2-201ENST00000366998 ZFHX3Q15911 3703 aa11.72□□□□□ -0.53
NEK2-201ENST00000366998 OR2T8A6NH00 312 aa11.72□□□□□ -0.53
NEK2-201ENST00000366998 SCGB2A1O75556 95 aa11.72□□□□□ -0.53
NEK2-201ENST00000366998 F8W735 103 aaPredicted RBP11.72□□□□□ -0.53
NEK2-201ENST00000366998 IGHV4-59P01825 116 aa11.72□□□□□ -0.53
NEK2-201ENST00000366998 IL4P05112 153 aa11.72□□□□□ -0.53
NEK2-201ENST00000366998 C15orf32Q32M92 178 aa11.72□□□□□ -0.53
NEK2-201ENST00000366998 LEMD1Q68G75 181 aa11.72□□□□□ -0.53
NEK2-201ENST00000366998 WFDC11Q8NEX6 87 aa11.72□□□□□ -0.53
NEK2-201ENST00000366998 STXBP6Q8NFX7 210 aa11.72□□□□□ -0.53
NEK2-201ENST00000366998 VN1R17PQ8TDU5 208 aa11.72□□□□□ -0.53
NEK2-201ENST00000366998 MS4A10Q96PG2 267 aa11.72□□□□□ -0.53
NEK2-201ENST00000366998 DERL1Q9BUN8 251 aa11.72□□□□□ -0.53
NEK2-201ENST00000366998 B4DEV8 164 aa11.71□□□□□ -0.53
NEK2-201ENST00000366998 YPEL3P61236 119 aaPredicted RBP11.71□□□□□ -0.53
NEK2-201ENST00000366998 Q8WTZ3 238 aa11.71□□□□□ -0.53
NEK2-201ENST00000366998 ISOC2Q96AB3 205 aa11.71□□□□□ -0.53
NEK2-201ENST00000366998 RNF125Q96EQ8 232 aa11.71□□□□□ -0.53
NEK2-201ENST00000366998 CREBBPQ92793 2442 aa11.71□□□□□ -0.54
NEK2-201ENST00000366998 TRBV9A0A0B4J1U6 114 aa11.7□□□□□ -0.54
NEK2-201ENST00000366998 SNRPCP09234 159 aaKnown RBP11.7□□□□□ -0.54
NEK2-201ENST00000366998 CRIP2P52943 208 aaPredicted RBP11.7□□□□□ -0.54
NEK2-201ENST00000366998 NECAP1Q8NC96 275 aa11.7□□□□□ -0.54
NEK2-201ENST00000366998 FXYD5Q96DB9 178 aa11.7□□□□□ -0.54
NEK2-201ENST00000366998 TXN2Q99757 166 aa11.7□□□□□ -0.54
NEK2-201ENST00000366998 SLC25A39Q9BZJ4 359 aaPredicted RBP11.7□□□□□ -0.54
NEK2-201ENST00000366998 A0A087WWC5 75 aa11.7□□□□□ -0.54
NEK2-201ENST00000366998 A0A1W2PRE2 83 aa11.7□□□□□ -0.54
NEK2-201ENST00000366998 GGTLC3B5MD39 225 aa11.7□□□□□ -0.54
NEK2-201ENST00000366998 SMAD7O15105 426 aaKnown RBP11.7□□□□□ -0.54
NEK2-201ENST00000366998 OR2C1O95371 312 aa11.7□□□□□ -0.54
NEK2-201ENST00000366998 FSHBP01225 129 aa11.7□□□□□ -0.54
NEK2-201ENST00000366998 IGHG2P01859 326 aa11.7□□□□□ -0.54
NEK2-201ENST00000366998 RPL23P62829 140 aaKnown RBP11.7□□□□□ -0.54
NEK2-201ENST00000366998 SUMO1P63165 101 aaKnown RBP11.7□□□□□ -0.54
NEK2-201ENST00000366998 ZNF491Q8N8L2 437 aa11.7□□□□□ -0.54
NEK2-201ENST00000366998 BLNKQ8WV28 456 aa11.7□□□□□ -0.54
NEK2-201ENST00000366998 MRPL27Q9P0M9 148 aaKnown RBP11.7□□□□□ -0.54
NEK2-201ENST00000366998 WI2-2373I1.2A0A1W2PRP0 233 aa11.69□□□□□ -0.54
NEK2-201ENST00000366998 GPR183P32249 361 aa11.69□□□□□ -0.54
NEK2-201ENST00000366998 BLCAPP62952 87 aa11.69□□□□□ -0.54
NEK2-201ENST00000366998 KLK9Q2XQG4 91 aa11.69□□□□□ -0.54
NEK2-201ENST00000366998 ZNF502Q8TBZ5 544 aa11.69□□□□□ -0.54
NEK2-201ENST00000366998 C11orf52Q96A22 123 aa11.69□□□□□ -0.54
NEK2-201ENST00000366998 KLK9Q9UKQ9 250 aa11.69□□□□□ -0.54
NEK2-201ENST00000366998 FCGR2BP31994 310 aaPredicted RBP11.68□□□□□ -0.54
NEK2-201ENST00000366998 C19orf54Q5BKX5 351 aa11.68□□□□□ -0.54
NEK2-201ENST00000366998 CIARTQ8N365 385 aaPredicted RBP11.68□□□□□ -0.54
NEK2-201ENST00000366998 C15orf54Q8N8G6 183 aa11.68□□□□□ -0.54
NEK2-201ENST00000366998 EEF1AKMT3Q96AZ1 226 aa11.68□□□□□ -0.54
NEK2-201ENST00000366998 NOL4LQ96MY1 436 aaPredicted RBP11.68□□□□□ -0.54
NEK2-201ENST00000366998 CHRDL1Q9BU40 450 aa11.68□□□□□ -0.54
NEK2-201ENST00000366998 H3BRN7 92 aa11.68□□□□□ -0.54
NEK2-201ENST00000366998 IGF1P05019 195 aa11.68□□□□□ -0.54
NEK2-201ENST00000366998 CTSGP08311 255 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 257 ms