RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 MEF2BQ02080 365 aaPredicted RBP16.54■□□□□ 0.24
VRK2-201ENST00000340157 C15orf32Q32M92 178 aa16.54■□□□□ 0.24
VRK2-201ENST00000340157 OR1B1Q8NGR6 318 aa16.54■□□□□ 0.24
VRK2-201ENST00000340157 OR5R1Q8NH85 324 aa16.54■□□□□ 0.24
VRK2-201ENST00000340157 PFDN5Q99471 154 aa16.54■□□□□ 0.24
VRK2-201ENST00000340157 TECRQ9NZ01 308 aaKnown RBP16.54■□□□□ 0.24
VRK2-201ENST00000340157 ZNF355PQ9NSJ1 428 aa16.53■□□□□ 0.24
VRK2-201ENST00000340157 GNG7O60262 68 aa16.52■□□□□ 0.24
VRK2-201ENST00000340157 C8orf88P0DMB2 117 aa16.52■□□□□ 0.24
VRK2-201ENST00000340157 UBE2G2P60604 165 aa16.52■□□□□ 0.24
VRK2-201ENST00000340157 SVBPQ8N300 66 aa16.52■□□□□ 0.24
VRK2-201ENST00000340157 VN1R17PQ8TDU5 208 aa16.52■□□□□ 0.24
VRK2-201ENST00000340157 MS4A10Q96PG2 267 aa16.52■□□□□ 0.24
VRK2-201ENST00000340157 RNF2Q99496 336 aa16.52■□□□□ 0.24
VRK2-201ENST00000340157 VPREB3Q9UKI3 123 aa16.52■□□□□ 0.24
VRK2-201ENST00000340157 ELOA3CA0A087WX78 387 aaPredicted RBP16.52■□□□□ 0.23
VRK2-201ENST00000340157 RD3LP0DJH9 198 aa16.52■□□□□ 0.23
VRK2-201ENST00000340157 PPIFP30405 207 aaKnown RBP16.52■□□□□ 0.23
VRK2-201ENST00000340157 FCGR2BP31994 310 aaPredicted RBP16.52■□□□□ 0.23
VRK2-201ENST00000340157 Q56UQ5 140 aa16.52■□□□□ 0.23
VRK2-201ENST00000340157 FAM90A2PQ658T7 463 aa16.52■□□□□ 0.23
VRK2-201ENST00000340157 LINC00305Q7Z4B0 112 aa16.52■□□□□ 0.23
VRK2-201ENST00000340157 ZNF502Q8TBZ5 544 aa16.52■□□□□ 0.23
VRK2-201ENST00000340157 ZNF414Q96IQ9 312 aa16.52■□□□□ 0.23
VRK2-201ENST00000340157 OR2T8A6NH00 312 aa16.51■□□□□ 0.23
VRK2-201ENST00000340157 HOXA3O43365 443 aaPredicted RBP16.51■□□□□ 0.23
VRK2-201ENST00000340157 TOMM40O96008 361 aa16.51■□□□□ 0.23
VRK2-201ENST00000340157 CEBPGP53567 150 aa16.51■□□□□ 0.23
VRK2-201ENST00000340157 SOHLH1Q5JUK2 328 aa16.51■□□□□ 0.23
VRK2-201ENST00000340157 NECAP1Q8NC96 275 aa16.51■□□□□ 0.23
VRK2-201ENST00000340157 YTHDF2Q9Y5A9 579 aaKnown RBP16.51■□□□□ 0.23
VRK2-201ENST00000340157 CD5LO43866 347 aa16.5■□□□□ 0.23
VRK2-201ENST00000340157 HYPMO75409 117 aa16.5■□□□□ 0.23
VRK2-201ENST00000340157 ATP5G3P48201 142 aa16.5■□□□□ 0.23
VRK2-201ENST00000340157 LYZP61626 148 aa16.5■□□□□ 0.23
VRK2-201ENST00000340157 PQLC2Q6ZP29 291 aa16.5■□□□□ 0.23
VRK2-201ENST00000340157 CCDC140Q96MF4 163 aa16.5■□□□□ 0.23
VRK2-201ENST00000340157 TRAV30A0A087WSZ9 112 aa16.5■□□□□ 0.23
VRK2-201ENST00000340157 OR7C2O60412 319 aa16.5■□□□□ 0.23
VRK2-201ENST00000340157 CTSGP08311 255 aa16.5■□□□□ 0.23
VRK2-201ENST00000340157 ADMP35318 185 aa16.5■□□□□ 0.23
VRK2-201ENST00000340157 TAGLN2P37802 199 aaKnown RBP16.5■□□□□ 0.23
VRK2-201ENST00000340157 TAS2R45P59539 299 aa16.5■□□□□ 0.23
VRK2-201ENST00000340157 YPEL3P61236 119 aaPredicted RBP16.5■□□□□ 0.23
VRK2-201ENST00000340157 KIAA0141Q14154 515 aaPredicted RBP16.5■□□□□ 0.23
VRK2-201ENST00000340157 TMEM95Q3KNT9 176 aa16.5■□□□□ 0.23
VRK2-201ENST00000340157 ZNF491Q8N8L2 437 aa16.5■□□□□ 0.23
VRK2-201ENST00000340157 OR5AU1Q8NGC0 362 aa16.5■□□□□ 0.23
VRK2-201ENST00000340157 SUN5Q8TC36 379 aa16.5■□□□□ 0.23
VRK2-201ENST00000340157 CHRDL1Q9BU40 450 aa16.5■□□□□ 0.23
VRK2-201ENST00000340157 TXN2Q99757 166 aa16.49■□□□□ 0.23
VRK2-201ENST00000340157 ANK3Q12955 4377 aaKnown RBP16.49■□□□□ 0.23
VRK2-201ENST00000340157 FAM74A7A6NL05 159 aa16.48■□□□□ 0.23
VRK2-201ENST00000340157 C11orf94C9JXX5 98 aa16.48■□□□□ 0.23
VRK2-201ENST00000340157 AP4M1O00189 453 aa16.48■□□□□ 0.23
VRK2-201ENST00000340157 OR10J4P0C629 311 aa16.48■□□□□ 0.23
VRK2-201ENST00000340157 CFHR3Q02985 330 aa16.48■□□□□ 0.23
VRK2-201ENST00000340157 OR51G1Q8NGK1 321 aa16.48■□□□□ 0.23
VRK2-201ENST00000340157 OR4F5Q8NH21 305 aa16.48■□□□□ 0.23
VRK2-201ENST00000340157 OR4F4Q96R69 305 aa16.48■□□□□ 0.23
VRK2-201ENST00000340157 NKX6-2Q9C056 277 aaPredicted RBP16.48■□□□□ 0.23
VRK2-201ENST00000340157 MRPL27Q9P0M9 148 aaKnown RBP16.48■□□□□ 0.23
VRK2-201ENST00000340157 OTOGQ6ZRI0 2925 aa16.48■□□□□ 0.23
VRK2-201ENST00000340157 WI2-2373I1.2A0A1W2PRP0 233 aa16.48■□□□□ 0.23
VRK2-201ENST00000340157 PYYP10082 97 aa16.48■□□□□ 0.23
VRK2-201ENST00000340157 SIGLECL1Q8N7X8 197 aa16.48■□□□□ 0.23
VRK2-201ENST00000340157 FABP1P07148 127 aa16.47■□□□□ 0.23
VRK2-201ENST00000340157 NPPCP23582 126 aa16.47■□□□□ 0.23
VRK2-201ENST00000340157 GPR183P32249 361 aa16.47■□□□□ 0.23
VRK2-201ENST00000340157 CST9LP1Q5W188 147 aa16.47■□□□□ 0.23
VRK2-201ENST00000340157 CLRN3Q8NCR9 226 aa16.47■□□□□ 0.23
VRK2-201ENST00000340157 HIGD1AQ9Y241 93 aa16.47■□□□□ 0.23
VRK2-201ENST00000340157 OR2C1O95371 312 aa16.46■□□□□ 0.23
VRK2-201ENST00000340157 IL4P05112 153 aa16.46■□□□□ 0.23
VRK2-201ENST00000340157 LEMD1Q68G75 181 aa16.46■□□□□ 0.23
VRK2-201ENST00000340157 RNF125Q96EQ8 232 aa16.46■□□□□ 0.23
VRK2-201ENST00000340157 ZNF580Q9UK33 172 aa16.46■□□□□ 0.23
VRK2-201ENST00000340157 NOTCH2Q04721 2471 aa16.46■□□□□ 0.23
VRK2-201ENST00000340157 NDUFS6O75380 124 aaKnown RBP16.46■□□□□ 0.22
VRK2-201ENST00000340157 SNAPINO95295 136 aa16.46■□□□□ 0.22
VRK2-201ENST00000340157 BRI3O95415 125 aa16.46■□□□□ 0.22
VRK2-201ENST00000340157 USF2Q15853 346 aaPredicted RBP16.46■□□□□ 0.22
VRK2-201ENST00000340157 SLC25A39Q9BZJ4 359 aaPredicted RBP16.46■□□□□ 0.22
VRK2-201ENST00000340157 TMEM167BQ9NRX6 74 aa16.46■□□□□ 0.22
VRK2-201ENST00000340157 CUBNO60494 3623 aa16.45■□□□□ 0.22
VRK2-201ENST00000340157 FAM223BA6NKX1 122 aa16.45■□□□□ 0.22
VRK2-201ENST00000340157 TMEM250H0YL14 139 aa16.45■□□□□ 0.22
VRK2-201ENST00000340157 IGLV1-40P01703 118 aa16.45■□□□□ 0.22
VRK2-201ENST00000340157 TRGV3P03979 118 aa16.45■□□□□ 0.22
VRK2-201ENST00000340157 CLEC3BP05452 202 aa16.45■□□□□ 0.22
VRK2-201ENST00000340157 FAM223AQ8IWN6 122 aa16.45■□□□□ 0.22
VRK2-201ENST00000340157 FXYD5Q96DB9 178 aa16.45■□□□□ 0.22
VRK2-201ENST00000340157 DUX5Q96PT3 197 aa16.45■□□□□ 0.22
VRK2-201ENST00000340157 PAXXQ9BUH6 204 aa16.45■□□□□ 0.22
VRK2-201ENST00000340157 KLK15Q9H2R5 256 aa16.45■□□□□ 0.22
VRK2-201ENST00000340157 PUS1Q9Y606 427 aaKnown RBP eCLIP16.45■□□□□ 0.22
VRK2-201ENST00000340157 H3BQ15 152 aa16.44■□□□□ 0.22
VRK2-201ENST00000340157 UBE2L3P68036 154 aaKnown RBP16.44■□□□□ 0.22
VRK2-201ENST00000340157 CLEC19AQ6UXS0 136 aa16.44■□□□□ 0.22
VRK2-201ENST00000340157 TEX29Q8N6K0 151 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms