RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 GGTLC3B5MD39 225 aa13.43□□□□□ -0.26
CDC42EP4-201ENST00000335793 PMCHL1Q16048 86 aa13.43□□□□□ -0.26
CDC42EP4-201ENST00000335793 MUC15Q8N387 334 aa13.43□□□□□ -0.26
CDC42EP4-201ENST00000335793 USF1P22415 310 aaPredicted RBP13.43□□□□□ -0.26
CDC42EP4-201ENST00000335793 RPL8P62917 257 aaKnown RBP13.43□□□□□ -0.26
CDC42EP4-201ENST00000335793 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.43□□□□□ -0.26
CDC42EP4-201ENST00000335793 ZNF355PQ9NSJ1 428 aa13.43□□□□□ -0.26
CDC42EP4-201ENST00000335793 CFHR2P36980 270 aa13.42□□□□□ -0.26
CDC42EP4-201ENST00000335793 GAFA1Q96PS6 74 aa13.42□□□□□ -0.26
CDC42EP4-201ENST00000335793 MFAP2P55001 183 aa13.42□□□□□ -0.26
CDC42EP4-201ENST00000335793 OR1L8Q8NGR8 309 aa13.42□□□□□ -0.26
CDC42EP4-201ENST00000335793 PMCHL2Q9BQD1 86 aa13.42□□□□□ -0.26
CDC42EP4-201ENST00000335793 SFXN3Q9BWM7 321 aa13.42□□□□□ -0.26
CDC42EP4-201ENST00000335793 RPUSD1Q9UJJ7 312 aaKnown RBP13.42□□□□□ -0.26
CDC42EP4-201ENST00000335793 ZNF324O75467 553 aaPredicted RBP13.42□□□□□ -0.26
CDC42EP4-201ENST00000335793 ESDP10768 282 aa13.42□□□□□ -0.26
CDC42EP4-201ENST00000335793 SSUH2Q9Y2M2 353 aa13.42□□□□□ -0.26
CDC42EP4-201ENST00000335793 AMMECR1Q9Y4X0 333 aaPredicted RBP13.42□□□□□ -0.26
CDC42EP4-201ENST00000335793 G3V4G9 280 aa13.41□□□□□ -0.26
CDC42EP4-201ENST00000335793 LHBP01229 141 aa13.41□□□□□ -0.26
CDC42EP4-201ENST00000335793 PLP1P60201 277 aa13.41□□□□□ -0.26
CDC42EP4-201ENST00000335793 PRB3Q04118 309 aaPredicted RBP13.41□□□□□ -0.26
CDC42EP4-201ENST00000335793 FAM231BA6NCW3 169 aa13.41□□□□□ -0.26
CDC42EP4-201ENST00000335793 CD69Q07108 199 aa13.41□□□□□ -0.26
CDC42EP4-201ENST00000335793 MORN5Q5VZ52 161 aa13.41□□□□□ -0.26
CDC42EP4-201ENST00000335793 HCP5Q6MZN7 132 aa13.41□□□□□ -0.26
CDC42EP4-201ENST00000335793 PAXXQ9BUH6 204 aa13.41□□□□□ -0.26
CDC42EP4-201ENST00000335793 CDC42EP3Q9UKI2 254 aa13.41□□□□□ -0.26
CDC42EP4-201ENST00000335793 APC2O95996 2303 aa13.41□□□□□ -0.26
CDC42EP4-201ENST00000335793 H3BTX0 84 aa13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 CGB3P0DN86 165 aa13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 CGB7P0DN87 165 aa13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 MC5RP33032 325 aa13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 UBE2G1P62253 170 aa13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 CR1LQ2VPA4 569 aa13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 BVES-AS1Q5T3Y7 98 aa13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 C10orf113Q5VZT2 155 aa13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 ZNF788Q6ZQV5 615 aa13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 C22orf34Q6ZV56 151 aa13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 OR5B3Q8NH48 314 aa13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 OR4A5Q8NH83 315 aa13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 C11orf52Q96A22 123 aa13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 KCNS1Q96KK3 526 aa13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 SLC25A33Q9BSK2 321 aa13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 MED13LQ71F56 2210 aa13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 TRAV9-2A0A087WT02 112 aa13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 HSBP1O75506 76 aa13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 APCSP02743 223 aa13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 PPIAL4GP0DN37 164 aa13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 RNASE2P10153 161 aaKnown RBP13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 TNFRSF1AP19438 455 aa13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 KIR3DL3Q8N743 410 aa13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 GNB1LQ9BYB4 327 aa13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 MBD3L4A6NDZ8 208 aaPredicted RBP13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 MBD3L3A6NE82 208 aaPredicted RBP13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 MBD3L5A6NJ08 208 aaPredicted RBP13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 CD40P25942 277 aa13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 CX3CL1P78423 397 aa13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 FAM71F2Q6NXP2 309 aa13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 RNASEKQ6P5S7 137 aaKnown RBP13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 MBD3L2Q8NHZ7 208 aaPredicted RBP13.4□□□□□ -0.26
CDC42EP4-201ENST00000335793 C7orf71A4D174 169 aa13.39□□□□□ -0.27
CDC42EP4-201ENST00000335793 SLC25A17O43808 307 aa13.39□□□□□ -0.27
CDC42EP4-201ENST00000335793 SLC25A48Q6ZT89 311 aaKnown RBP13.39□□□□□ -0.27
CDC42EP4-201ENST00000335793 ZNF714Q96N38 554 aa13.39□□□□□ -0.27
CDC42EP4-201ENST00000335793 TRAV9-1A0A075B6T8 112 aa13.39□□□□□ -0.27
CDC42EP4-201ENST00000335793 H3BUT2 72 aa13.39□□□□□ -0.27
CDC42EP4-201ENST00000335793 M0R2Z0 102 aa13.39□□□□□ -0.27
CDC42EP4-201ENST00000335793 MT-ND6P03923 174 aa13.39□□□□□ -0.27
CDC42EP4-201ENST00000335793 CKS1BP61024 79 aa13.39□□□□□ -0.27
CDC42EP4-201ENST00000335793 PRSS57Q6UWY2 283 aa13.39□□□□□ -0.27
CDC42EP4-201ENST00000335793 ZNF503Q96F45 646 aa13.39□□□□□ -0.27
CDC42EP4-201ENST00000335793 SAP30LQ9HAJ7 183 aa13.39□□□□□ -0.27
CDC42EP4-201ENST00000335793 ZNF257Q9Y2Q1 563 aa13.39□□□□□ -0.27
CDC42EP4-201ENST00000335793 TANC2Q9HCD6 1990 aa13.39□□□□□ -0.27
CDC42EP4-201ENST00000335793 SUB1P53999 127 aaKnown RBP eCLIP13.38□□□□□ -0.27
CDC42EP4-201ENST00000335793 SSBP2P81877 361 aaPredicted RBP13.38□□□□□ -0.27
CDC42EP4-201ENST00000335793 MEF2CQ06413 473 aaPredicted RBP13.38□□□□□ -0.27
CDC42EP4-201ENST00000335793 DIAPH2-AS1Q14236 149 aa13.38□□□□□ -0.27
CDC42EP4-201ENST00000335793 FAM168AQ92567 244 aa13.38□□□□□ -0.27
CDC42EP4-201ENST00000335793 OSTCQ9NRP0 149 aa13.38□□□□□ -0.27
CDC42EP4-201ENST00000335793 HILPDAQ9Y5L2 63 aa13.38□□□□□ -0.27
CDC42EP4-201ENST00000335793 WNK2Q9Y3S1 2297 aa13.38□□□□□ -0.27
CDC42EP4-201ENST00000335793 SH2D7A6NKC9 451 aaPredicted RBP13.38□□□□□ -0.27
CDC42EP4-201ENST00000335793 E7EUB6 86 aa13.38□□□□□ -0.27
CDC42EP4-201ENST00000335793 MOSP00540 346 aa13.38□□□□□ -0.27
CDC42EP4-201ENST00000335793 SLC25A5P05141 298 aaKnown RBP13.38□□□□□ -0.27
CDC42EP4-201ENST00000335793 GNG5P63218 68 aa13.38□□□□□ -0.27
CDC42EP4-201ENST00000335793 C2orf83Q53S99 150 aa13.38□□□□□ -0.27
CDC42EP4-201ENST00000335793 TSKUQ8WUA8 353 aa13.38□□□□□ -0.27
CDC42EP4-201ENST00000335793 FAM215AQ9Y5M1 114 aa13.38□□□□□ -0.27
CDC42EP4-201ENST00000335793 SERTM2A0A1B0GWG4 89 aa13.38□□□□□ -0.27
CDC42EP4-201ENST00000335793 GPR6P46095 362 aaPredicted RBP13.38□□□□□ -0.27
CDC42EP4-201ENST00000335793 PERPQ96FX8 193 aa13.38□□□□□ -0.27
CDC42EP4-201ENST00000335793 ATP6V0BQ99437 205 aa13.38□□□□□ -0.27
CDC42EP4-201ENST00000335793 DMXL2Q8TDJ6 3036 aa13.38□□□□□ -0.27
CDC42EP4-201ENST00000335793 AMY1AP04745 511 aa13.37□□□□□ -0.27
CDC42EP4-201ENST00000335793 TCF15Q12870 199 aa13.37□□□□□ -0.27
CDC42EP4-201ENST00000335793 PRSS33Q8NF86 280 aa13.37□□□□□ -0.27
CDC42EP4-201ENST00000335793 SSBP4Q9BWG4 385 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms