RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 NIT1Q86X76 327 aa14.01□□□□□ -0.17
PTP4A3-201ENST00000329397 TSKUQ8WUA8 353 aa14.01□□□□□ -0.17
PTP4A3-201ENST00000329397 LINC00312Q9Y6C7 94 aa14.01□□□□□ -0.17
PTP4A3-201ENST00000329397 IGKV1D-37A0A075B6S9 117 aa14.01□□□□□ -0.17
PTP4A3-201ENST00000329397 MMDQ15546 238 aa14.01□□□□□ -0.17
PTP4A3-201ENST00000329397 ZNF714Q96N38 554 aa14.01□□□□□ -0.17
PTP4A3-201ENST00000329397 CCL25O15444 150 aa14□□□□□ -0.17
PTP4A3-201ENST00000329397 IGF2-ASQ6U949 168 aa14□□□□□ -0.17
PTP4A3-201ENST00000329397 PIP4P1Q86T03 277 aa14□□□□□ -0.17
PTP4A3-201ENST00000329397 ZNF329Q86UD4 541 aa14□□□□□ -0.17
PTP4A3-201ENST00000329397 ZNF331Q9NQX6 463 aaPredicted RBP14□□□□□ -0.17
PTP4A3-201ENST00000329397 M0QZ24 198 aa14□□□□□ -0.17
PTP4A3-201ENST00000329397 MT-ND6P03923 174 aa14□□□□□ -0.17
PTP4A3-201ENST00000329397 LINC00305Q7Z4B0 112 aa14□□□□□ -0.17
PTP4A3-201ENST00000329397 C11orf42Q8N5U0 333 aa14□□□□□ -0.17
PTP4A3-201ENST00000329397 NUP35Q8NFH5 326 aa14□□□□□ -0.17
PTP4A3-201ENST00000329397 OSR1Q8TAX0 266 aaPredicted RBP14□□□□□ -0.17
PTP4A3-201ENST00000329397 ZNF596Q8TC21 504 aa14□□□□□ -0.17
PTP4A3-201ENST00000329397 ARL2-SNX15V9GYD0 113 aa14□□□□□ -0.17
PTP4A3-201ENST00000329397 VWC2LB2RUY7 222 aa14□□□□□ -0.17
PTP4A3-201ENST00000329397 PEX7O00628 323 aa14□□□□□ -0.17
PTP4A3-201ENST00000329397 ENSAO43768 121 aaKnown RBP14□□□□□ -0.17
PTP4A3-201ENST00000329397 C18orf32Q8TCD1 76 aa14□□□□□ -0.17
PTP4A3-201ENST00000329397 C20orf202A1L168 122 aa13.99□□□□□ -0.17
PTP4A3-201ENST00000329397 IZUMO1RA6ND01 250 aa13.99□□□□□ -0.17
PTP4A3-201ENST00000329397 TM4SF5O14894 197 aa13.99□□□□□ -0.17
PTP4A3-201ENST00000329397 TOX4O94842 621 aa13.99□□□□□ -0.17
PTP4A3-201ENST00000329397 HLA-DQA1P01909 254 aa13.99□□□□□ -0.17
PTP4A3-201ENST00000329397 RBMXL3Q8N7X1 1067 aaKnown RBP13.99□□□□□ -0.17
PTP4A3-201ENST00000329397 OR5AN1Q8NGI8 311 aa13.99□□□□□ -0.17
PTP4A3-201ENST00000329397 OR1B1Q8NGR6 318 aa13.99□□□□□ -0.17
PTP4A3-201ENST00000329397 ALKBH7Q9BT30 221 aaPredicted RBP13.99□□□□□ -0.17
PTP4A3-201ENST00000329397 LINC00574Q9H8X3 128 aa13.99□□□□□ -0.17
PTP4A3-201ENST00000329397 A0A1W2PPI3 338 aa13.99□□□□□ -0.17
PTP4A3-201ENST00000329397 APOBEC3AP31941 199 aaPredicted RBP13.99□□□□□ -0.17
PTP4A3-201ENST00000329397 TNXAQ16473 311 aa13.99□□□□□ -0.17
PTP4A3-201ENST00000329397 OR10J3Q5JRS4 329 aa13.99□□□□□ -0.17
PTP4A3-201ENST00000329397 Q71RC1 249 aaPredicted RBP13.99□□□□□ -0.17
PTP4A3-201ENST00000329397 SPACA3Q8IXA5 215 aa13.99□□□□□ -0.17
PTP4A3-201ENST00000329397 SPTA1P02549 2419 aa13.98□□□□□ -0.17
PTP4A3-201ENST00000329397 CNTFRP26992 372 aa13.98□□□□□ -0.17
PTP4A3-201ENST00000329397 ADIPOQQ15848 244 aa13.98□□□□□ -0.17
PTP4A3-201ENST00000329397 TCF24Q7RTU0 167 aa13.98□□□□□ -0.17
PTP4A3-201ENST00000329397 FXYD5Q96DB9 178 aa13.98□□□□□ -0.17
PTP4A3-201ENST00000329397 TP73-AS1Q9UF72 201 aa13.98□□□□□ -0.17
PTP4A3-201ENST00000329397 ARHGAP32A7KAX9 2087 aa13.98□□□□□ -0.17
PTP4A3-201ENST00000329397 SH2D7A6NKC9 451 aaPredicted RBP13.98□□□□□ -0.17
PTP4A3-201ENST00000329397 HIGD1CA8MV81 97 aa13.98□□□□□ -0.17
PTP4A3-201ENST00000329397 NBEAP1P0C6P0 100 aa13.98□□□□□ -0.17
PTP4A3-201ENST00000329397 PMCHL1Q16048 86 aa13.98□□□□□ -0.17
PTP4A3-201ENST00000329397 TEX36Q5VZQ5 186 aa13.98□□□□□ -0.17
PTP4A3-201ENST00000329397 CEP295Q9C0D2 2601 aa13.97□□□□□ -0.17
PTP4A3-201ENST00000329397 LINC00322Q6ZN03 302 aaPredicted RBP13.97□□□□□ -0.17
PTP4A3-201ENST00000329397 OR4C13Q8NGP0 309 aa13.97□□□□□ -0.17
PTP4A3-201ENST00000329397 MRPL32Q9BYC8 188 aaKnown RBP13.97□□□□□ -0.17
PTP4A3-201ENST00000329397 TLN1Q9Y490 2541 aaKnown RBP13.97□□□□□ -0.17
PTP4A3-201ENST00000329397 ASH1LQ9NR48 2969 aaKnown RBP13.97□□□□□ -0.17
PTP4A3-201ENST00000329397 DPRXA6NFQ7 191 aa13.97□□□□□ -0.17
PTP4A3-201ENST00000329397 CTRLP40313 264 aa13.97□□□□□ -0.17
PTP4A3-201ENST00000329397 BSPH1Q075Z2 132 aa13.97□□□□□ -0.17
PTP4A3-201ENST00000329397 CTSZQ9UBR2 303 aa13.97□□□□□ -0.17
PTP4A3-201ENST00000329397 TCRBV4S1A1TA0A5B7 111 aa13.96□□□□□ -0.17
PTP4A3-201ENST00000329397 C17orf100A8MU93 164 aa13.96□□□□□ -0.17
PTP4A3-201ENST00000329397 IGLV2-23P01705 113 aa13.96□□□□□ -0.17
PTP4A3-201ENST00000329397 SLC25A5P05141 298 aaKnown RBP13.96□□□□□ -0.17
PTP4A3-201ENST00000329397 RPL19P84098 196 aaKnown RBP13.96□□□□□ -0.17
PTP4A3-201ENST00000329397 RNASEKQ6P5S7 137 aaKnown RBP13.96□□□□□ -0.17
PTP4A3-201ENST00000329397 Q6ZVH6 145 aa13.96□□□□□ -0.17
PTP4A3-201ENST00000329397 PNKDQ8N490 385 aa13.96□□□□□ -0.17
PTP4A3-201ENST00000329397 KIR3DL3Q8N743 410 aa13.96□□□□□ -0.17
PTP4A3-201ENST00000329397 OR2D3Q8NGH3 330 aa13.96□□□□□ -0.17
PTP4A3-201ENST00000329397 CACNG8Q8WXS5 425 aa13.96□□□□□ -0.17
PTP4A3-201ENST00000329397 ASCL2Q99929 193 aa13.96□□□□□ -0.17
PTP4A3-201ENST00000329397 C19orf24Q9BVV8 132 aa13.96□□□□□ -0.17
PTP4A3-201ENST00000329397 CLEC7AQ9BXN2 247 aa13.96□□□□□ -0.17
PTP4A3-201ENST00000329397 FSTL3O95633 263 aa13.96□□□□□ -0.17
PTP4A3-201ENST00000329397 FOXA3P55318 350 aaPredicted RBP13.96□□□□□ -0.17
PTP4A3-201ENST00000329397 TBR1Q16650 682 aa13.96□□□□□ -0.17
PTP4A3-201ENST00000329397 TMEM177Q53S58 311 aa13.96□□□□□ -0.17
PTP4A3-201ENST00000329397 SHISA2Q6UWI4 295 aa13.96□□□□□ -0.17
PTP4A3-201ENST00000329397 OR4B1Q8NGF8 309 aa13.96□□□□□ -0.17
PTP4A3-201ENST00000329397 ZFP30Q9Y2G7 519 aa13.96□□□□□ -0.17
PTP4A3-201ENST00000329397 MED13LQ71F56 2210 aa13.96□□□□□ -0.18
PTP4A3-201ENST00000329397 Q56UQ5 140 aa13.95□□□□□ -0.18
PTP4A3-201ENST00000329397 Q6ZN92 141 aa13.95□□□□□ -0.18
PTP4A3-201ENST00000329397 TMEM167AQ8TBQ9 72 aa13.95□□□□□ -0.18
PTP4A3-201ENST00000329397 PGPA6NDG6 321 aa13.95□□□□□ -0.18
PTP4A3-201ENST00000329397 HYPMO75409 117 aa13.95□□□□□ -0.18
PTP4A3-201ENST00000329397 CEACAM4O75871 244 aa13.95□□□□□ -0.18
PTP4A3-201ENST00000329397 MBD6Q96DN6 1003 aa13.95□□□□□ -0.18
PTP4A3-201ENST00000329397 FAM87AP0C7U9 286 aa13.94□□□□□ -0.18
PTP4A3-201ENST00000329397 UBE2G1P62253 170 aa13.94□□□□□ -0.18
PTP4A3-201ENST00000329397 BORCS7Q96B45 105 aa13.94□□□□□ -0.18
PTP4A3-201ENST00000329397 PPIAL4EA0A075B759 164 aa13.94□□□□□ -0.18
PTP4A3-201ENST00000329397 PPIAL4DF5H284 164 aa13.94□□□□□ -0.18
PTP4A3-201ENST00000329397 HSBP1O75506 76 aa13.94□□□□□ -0.18
PTP4A3-201ENST00000329397 PPIAL4FP0DN26 164 aa13.94□□□□□ -0.18
PTP4A3-201ENST00000329397 TNFRSF1AP19438 455 aa13.94□□□□□ -0.18
PTP4A3-201ENST00000329397 STPG4Q8N801 248 aa13.94□□□□□ -0.18
PTP4A3-201ENST00000329397 TNFRSF19Q9NS68 423 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms