RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 IGKV1D-37A0A075B6S9 117 aa13.61□□□□□ -0.23
SSSCA1-201ENST00000309328 CCNKO75909 580 aa13.61□□□□□ -0.23
SSSCA1-201ENST00000309328 DFFBO76075 338 aa13.61□□□□□ -0.23
SSSCA1-201ENST00000309328 IGLV1-51P01701 117 aa13.61□□□□□ -0.23
SSSCA1-201ENST00000309328 PSG1P11464 419 aa13.61□□□□□ -0.23
SSSCA1-201ENST00000309328 NPPCP23582 126 aa13.61□□□□□ -0.23
SSSCA1-201ENST00000309328 EGFEM1PQ0D2K5 195 aa13.61□□□□□ -0.23
SSSCA1-201ENST00000309328 ARL16Q0P5N6 197 aa13.61□□□□□ -0.23
SSSCA1-201ENST00000309328 OXLD1Q5BKU9 147 aa13.61□□□□□ -0.23
SSSCA1-201ENST00000309328 LCN12Q6JVE5 192 aa13.61□□□□□ -0.23
SSSCA1-201ENST00000309328 ZNF546Q86UE3 836 aa13.61□□□□□ -0.23
SSSCA1-201ENST00000309328 INO80EQ8NBZ0 244 aaPredicted RBP13.61□□□□□ -0.23
SSSCA1-201ENST00000309328 OR5C1Q8NGR4 320 aa13.61□□□□□ -0.23
SSSCA1-201ENST00000309328 SLC45A2Q9UMX9 530 aa13.61□□□□□ -0.23
SSSCA1-201ENST00000309328 LSM4Q9Y4Z0 139 aaKnown RBP13.61□□□□□ -0.23
SSSCA1-201ENST00000309328 HSPB11Q9Y547 144 aa13.61□□□□□ -0.23
SSSCA1-201ENST00000309328 IGKV1OR2-108A0A075B7D4 117 aa13.6□□□□□ -0.23
SSSCA1-201ENST00000309328 IL4P05112 153 aa13.6□□□□□ -0.23
SSSCA1-201ENST00000309328 TM4SF20Q53R12 229 aa13.6□□□□□ -0.23
SSSCA1-201ENST00000309328 PXDC1Q5TGL8 231 aa13.6□□□□□ -0.23
SSSCA1-201ENST00000309328 CHAC2Q8WUX2 184 aa13.6□□□□□ -0.23
SSSCA1-201ENST00000309328 AQP10Q96PS8 301 aa13.6□□□□□ -0.23
SSSCA1-201ENST00000309328 RNF24Q9Y225 148 aa13.6□□□□□ -0.23
SSSCA1-201ENST00000309328 TRAV25A0A0B4J276 109 aa13.59□□□□□ -0.23
SSSCA1-201ENST00000309328 IGHV7-4-1A0A0J9YVY3 117 aa13.59□□□□□ -0.23
SSSCA1-201ENST00000309328 CRYBB3P26998 211 aa13.59□□□□□ -0.23
SSSCA1-201ENST00000309328 ZNF90Q03938 601 aa13.59□□□□□ -0.23
SSSCA1-201ENST00000309328 LAMTOR1Q6IAA8 161 aa13.59□□□□□ -0.23
SSSCA1-201ENST00000309328 CYP2G1PQ6ZSU1 146 aa13.59□□□□□ -0.23
SSSCA1-201ENST00000309328 RNF125Q96EQ8 232 aa13.59□□□□□ -0.23
SSSCA1-201ENST00000309328 GRAMD2BQ96HH9 432 aa13.59□□□□□ -0.23
SSSCA1-201ENST00000309328 KCNIP2Q9NS61 270 aa13.59□□□□□ -0.23
SSSCA1-201ENST00000309328 SMPXQ9UHP9 88 aa13.59□□□□□ -0.23
SSSCA1-201ENST00000309328 RABAC1Q9UI14 185 aa13.59□□□□□ -0.23
SSSCA1-201ENST00000309328 WDR83OSQ9Y284 106 aa13.59□□□□□ -0.23
SSSCA1-201ENST00000309328 WI2-2373I1.2A0A1W2PRP0 233 aa13.58□□□□□ -0.24
SSSCA1-201ENST00000309328 G3V4G9 280 aa13.58□□□□□ -0.24
SSSCA1-201ENST00000309328 HNRNPCP07910 306 aaKnown RBP eCLIP13.58□□□□□ -0.24
SSSCA1-201ENST00000309328 NHLH2Q02577 135 aa13.58□□□□□ -0.24
SSSCA1-201ENST00000309328 ZNF414Q96IQ9 312 aa13.58□□□□□ -0.24
SSSCA1-201ENST00000309328 ATP5SQ99766 215 aa13.58□□□□□ -0.24
SSSCA1-201ENST00000309328 UBE2L5PA0A1B0GUS4 154 aa13.57□□□□□ -0.24
SSSCA1-201ENST00000309328 EIF2B2P49770 351 aaKnown RBP13.57□□□□□ -0.24
SSSCA1-201ENST00000309328 DEFB114Q30KQ6 69 aa13.57□□□□□ -0.24
SSSCA1-201ENST00000309328 BEAN1Q3B7T3 259 aa13.57□□□□□ -0.24
SSSCA1-201ENST00000309328 RHPN1-AS1Q9BWJ2 59 aa13.57□□□□□ -0.24
SSSCA1-201ENST00000309328 NBEAL1Q6ZS30 2694 aa13.56□□□□□ -0.24
SSSCA1-201ENST00000309328 FXYD6-FXYD2A0A087WZ82 144 aa13.56□□□□□ -0.24
SSSCA1-201ENST00000309328 AGPAT2O15120 278 aa13.56□□□□□ -0.24
SSSCA1-201ENST00000309328 IFNA5P01569 189 aa13.56□□□□□ -0.24
SSSCA1-201ENST00000309328 CAMLGP49069 296 aa13.56□□□□□ -0.24
SSSCA1-201ENST00000309328 PLP1P60201 277 aa13.56□□□□□ -0.24
SSSCA1-201ENST00000309328 LYZP61626 148 aa13.56□□□□□ -0.24
SSSCA1-201ENST00000309328 ZNF266Q14584 549 aa13.56□□□□□ -0.24
SSSCA1-201ENST00000309328 BTNL8Q6UX41 500 aa13.56□□□□□ -0.24
SSSCA1-201ENST00000309328 PARD6GQ9BYG4 376 aaPredicted RBP13.56□□□□□ -0.24
SSSCA1-201ENST00000309328 VSIRQ9H7M9 311 aa13.56□□□□□ -0.24
SSSCA1-201ENST00000309328 IGHV3OR16-8A0A075B7F1 116 aa13.55□□□□□ -0.24
SSSCA1-201ENST00000309328 CHEK1O14757 476 aa13.55□□□□□ -0.24
SSSCA1-201ENST00000309328 FGF7P21781 194 aa13.55□□□□□ -0.24
SSSCA1-201ENST00000309328 AP2S1P53680 142 aaPredicted RBP13.55□□□□□ -0.24
SSSCA1-201ENST00000309328 CLINT1Q14677 625 aa13.55□□□□□ -0.24
SSSCA1-201ENST00000309328 C1orf194Q5T5A4 169 aa13.55□□□□□ -0.24
SSSCA1-201ENST00000309328 ADAMTSL5Q6ZMM2 481 aa13.55□□□□□ -0.24
SSSCA1-201ENST00000309328 Q6ZRG5 221 aa13.55□□□□□ -0.24
SSSCA1-201ENST00000309328 RBPMS2Q6ZRY4 209 aaKnown RBP13.55□□□□□ -0.24
SSSCA1-201ENST00000309328 ZNF709Q8N972 641 aa13.55□□□□□ -0.24
SSSCA1-201ENST00000309328 PBDC1Q9BVG4 233 aa13.55□□□□□ -0.24
SSSCA1-201ENST00000309328 TNFSF18Q9UNG2 199 aa13.55□□□□□ -0.24
SSSCA1-201ENST00000309328 ZNF256Q9Y2P7 627 aaPredicted RBP13.55□□□□□ -0.24
SSSCA1-201ENST00000309328 ELOA3CA0A087WX78 387 aaPredicted RBP13.54□□□□□ -0.24
SSSCA1-201ENST00000309328 HMSDA8MTL9 139 aa13.54□□□□□ -0.24
SSSCA1-201ENST00000309328 C17orf112F2Z3M2 114 aa13.54□□□□□ -0.24
SSSCA1-201ENST00000309328 ZNF207O43670 478 aaKnown RBP13.54□□□□□ -0.24
SSSCA1-201ENST00000309328 LINC00869P0C866 280 aa13.54□□□□□ -0.24
SSSCA1-201ENST00000309328 RPL29P47914 159 aaKnown RBP13.54□□□□□ -0.24
SSSCA1-201ENST00000309328 OR2F1Q13607 317 aa13.54□□□□□ -0.24
SSSCA1-201ENST00000309328 USF2Q15853 346 aaPredicted RBP13.54□□□□□ -0.24
SSSCA1-201ENST00000309328 CD300EQ496F6 205 aaPredicted RBP13.54□□□□□ -0.24
SSSCA1-201ENST00000309328 TCTE3Q8IZS6 198 aa13.54□□□□□ -0.24
SSSCA1-201ENST00000309328 SCGB1C1Q8TD33 95 aa13.54□□□□□ -0.24
SSSCA1-201ENST00000309328 MGST2Q99735 147 aa13.54□□□□□ -0.24
SSSCA1-201ENST00000309328 SPAG8Q99932 426 aaPredicted RBP13.54□□□□□ -0.24
SSSCA1-201ENST00000309328 FBXL17Q9UF56 701 aa13.54□□□□□ -0.24
SSSCA1-201ENST00000309328 MLXQ9UH92 298 aa13.54□□□□□ -0.24
SSSCA1-201ENST00000309328 U3KQE9 123 aa13.54□□□□□ -0.24
SSSCA1-201ENST00000309328 HELTA6NFD8 242 aa13.53□□□□□ -0.24
SSSCA1-201ENST00000309328 HYPMO75409 117 aa13.53□□□□□ -0.24
SSSCA1-201ENST00000309328 PAFAH1B2P68402 229 aa13.53□□□□□ -0.24
SSSCA1-201ENST00000309328 Q5BKY6 102 aa13.53□□□□□ -0.24
SSSCA1-201ENST00000309328 PFDN5Q99471 154 aa13.53□□□□□ -0.24
SSSCA1-201ENST00000309328 GGTLC1Q9BX51 225 aa13.53□□□□□ -0.24
SSSCA1-201ENST00000309328 NPCDR1Q9BY65 106 aa13.53□□□□□ -0.24
SSSCA1-201ENST00000309328 WDR61Q9GZS3 305 aaKnown RBP13.53□□□□□ -0.24
SSSCA1-201ENST00000309328 G3V3Q6 166 aa13.52□□□□□ -0.25
SSSCA1-201ENST00000309328 TAAR5O14804 337 aa13.52□□□□□ -0.25
SSSCA1-201ENST00000309328 TSPAN4O14817 238 aa13.52□□□□□ -0.25
SSSCA1-201ENST00000309328 ZNF345Q14585 488 aa13.52□□□□□ -0.25
SSSCA1-201ENST00000309328 OPCMLQ14982 345 aa13.52□□□□□ -0.25
SSSCA1-201ENST00000309328 AKAP14Q86UN6 197 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms