RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 LGALS3P17931 250 aaKnown RBP12.73□□□□□ -0.37
LEMD3-201ENST00000308330 S100A4P26447 101 aaKnown RBP12.73□□□□□ -0.37
LEMD3-201ENST00000308330 SUPT4H1P63272 117 aaKnown RBP12.73□□□□□ -0.37
LEMD3-201ENST00000308330 CX3CL1P78423 397 aa12.73□□□□□ -0.37
LEMD3-201ENST00000308330 FAM159AQ6UWV7 190 aa12.73□□□□□ -0.37
LEMD3-201ENST00000308330 PYGO2Q9BRQ0 406 aa12.73□□□□□ -0.37
LEMD3-201ENST00000308330 MSRB2Q9Y3D2 182 aa12.73□□□□□ -0.37
LEMD3-201ENST00000308330 NOTCH4Q99466 2003 aa12.72□□□□□ -0.37
LEMD3-201ENST00000308330 AREGP15514 252 aa12.72□□□□□ -0.37
LEMD3-201ENST00000308330 FCGR2BP31994 310 aaPredicted RBP12.72□□□□□ -0.37
LEMD3-201ENST00000308330 SLC25A10Q9UBX3 287 aaPredicted RBP12.72□□□□□ -0.37
LEMD3-201ENST00000308330 HBDP02042 147 aa12.72□□□□□ -0.37
LEMD3-201ENST00000308330 FAM106CPP0CH98 169 aa12.72□□□□□ -0.37
LEMD3-201ENST00000308330 PRDX2P32119 198 aa12.72□□□□□ -0.37
LEMD3-201ENST00000308330 UNC119Q13432 240 aa12.72□□□□□ -0.37
LEMD3-201ENST00000308330 IGFBP7Q16270 282 aa12.72□□□□□ -0.37
LEMD3-201ENST00000308330 PIGYQ3MUY2 71 aa12.72□□□□□ -0.37
LEMD3-201ENST00000308330 FAM106AQ4KMX7 169 aa12.72□□□□□ -0.37
LEMD3-201ENST00000308330 IFI27L1Q96BM0 104 aa12.72□□□□□ -0.37
LEMD3-201ENST00000308330 NUPR1O60356 82 aa12.72□□□□□ -0.37
LEMD3-201ENST00000308330 LHFPL6Q9Y693 200 aa12.72□□□□□ -0.37
LEMD3-201ENST00000308330 C9JAW5 83 aa12.71□□□□□ -0.37
LEMD3-201ENST00000308330 SYNGR3O43761 229 aa12.71□□□□□ -0.37
LEMD3-201ENST00000308330 DPM2O94777 84 aa12.71□□□□□ -0.37
LEMD3-201ENST00000308330 KLF14Q8TD94 323 aaPredicted RBP12.71□□□□□ -0.37
LEMD3-201ENST00000308330 DEPPQ9NTK1 212 aa12.71□□□□□ -0.37
LEMD3-201ENST00000308330 PAQR4Q8N4S7 273 aaPredicted RBP12.71□□□□□ -0.37
LEMD3-201ENST00000308330 OR9G1Q8NH87 305 aa12.71□□□□□ -0.37
LEMD3-201ENST00000308330 C18orf12Q96KH6 178 aa12.71□□□□□ -0.37
LEMD3-201ENST00000308330 J3QRE1 110 aa12.71□□□□□ -0.38
LEMD3-201ENST00000308330 GATA2P23769 480 aaPredicted RBP12.71□□□□□ -0.38
LEMD3-201ENST00000308330 ASIPP42127 132 aa12.71□□□□□ -0.38
LEMD3-201ENST00000308330 CSPG4Q6UVK1 2322 aa12.71□□□□□ -0.38
LEMD3-201ENST00000308330 GPHA2Q96T91 129 aa12.7□□□□□ -0.38
LEMD3-201ENST00000308330 HEATR1Q9H583 2144 aaKnown RBP12.7□□□□□ -0.38
LEMD3-201ENST00000308330 HIGD1AQ9Y241 93 aa12.7□□□□□ -0.38
LEMD3-201ENST00000308330 ORM2P19652 201 aa12.7□□□□□ -0.38
LEMD3-201ENST00000308330 C10orf113Q5VZT2 155 aa12.7□□□□□ -0.38
LEMD3-201ENST00000308330 SNRNP40Q96DI7 357 aaKnown RBP12.7□□□□□ -0.38
LEMD3-201ENST00000308330 SIGLEC8Q9NYZ4 499 aa12.7□□□□□ -0.38
LEMD3-201ENST00000308330 C1RLQ9NZP8 487 aa12.7□□□□□ -0.38
LEMD3-201ENST00000308330 ZGRF1Q86YA3 2104 aa12.7□□□□□ -0.38
LEMD3-201ENST00000308330 PGLYRP1O75594 196 aaPredicted RBP12.7□□□□□ -0.38
LEMD3-201ENST00000308330 ZNF658BQ4V348 819 aaPredicted RBP12.7□□□□□ -0.38
LEMD3-201ENST00000308330 KLF17Q5JT82 389 aaPredicted RBP12.7□□□□□ -0.38
LEMD3-201ENST00000308330 DOCK11Q5JSL3 2073 aa12.7□□□□□ -0.38
LEMD3-201ENST00000308330 IGKCP01834 107 aa12.7□□□□□ -0.38
LEMD3-201ENST00000308330 C9orf106Q8NAJ2 232 aa12.7□□□□□ -0.38
LEMD3-201ENST00000308330 PRNTQ86SH4 94 aa12.69□□□□□ -0.38
LEMD3-201ENST00000308330 SRSF12Q8WXF0 261 aaKnown RBP12.69□□□□□ -0.38
LEMD3-201ENST00000308330 TMUB1Q9BVT8 246 aa12.69□□□□□ -0.38
LEMD3-201ENST00000308330 FBLN5Q9UBX5 448 aa12.69□□□□□ -0.38
LEMD3-201ENST00000308330 C2orf82Q6UX34 121 aa12.69□□□□□ -0.38
LEMD3-201ENST00000308330 TNRC6AQ8NDV7 1962 aaKnown RBP12.69□□□□□ -0.38
LEMD3-201ENST00000308330 C2orf83Q53S99 150 aa12.69□□□□□ -0.38
LEMD3-201ENST00000308330 DOCK4Q8N1I0 1966 aa12.69□□□□□ -0.38
LEMD3-201ENST00000308330 PRSS57Q6UWY2 283 aa12.68□□□□□ -0.38
LEMD3-201ENST00000308330 KIF26BQ2KJY2 2108 aa12.68□□□□□ -0.38
LEMD3-201ENST00000308330 TMEM229AB2RXF0 380 aa12.68□□□□□ -0.38
LEMD3-201ENST00000308330 ATP5L2Q7Z4Y8 100 aa12.68□□□□□ -0.38
LEMD3-201ENST00000308330 SHISA5Q8N114 240 aa12.68□□□□□ -0.38
LEMD3-201ENST00000308330 A0A1B0GUT8 65 aa12.68□□□□□ -0.38
LEMD3-201ENST00000308330 CGAP01215 116 aa12.68□□□□□ -0.38
LEMD3-201ENST00000308330 RPL15P61313 204 aaKnown RBP12.68□□□□□ -0.38
LEMD3-201ENST00000308330 TFF3Q07654 80 aa12.68□□□□□ -0.38
LEMD3-201ENST00000308330 FOXI1Q12951 378 aa12.68□□□□□ -0.38
LEMD3-201ENST00000308330 HAPLN4Q86UW8 402 aa12.68□□□□□ -0.38
LEMD3-201ENST00000308330 SMIM9A6NGZ8 99 aa12.67□□□□□ -0.38
LEMD3-201ENST00000308330 ZG16O60844 167 aa12.67□□□□□ -0.38
LEMD3-201ENST00000308330 NDUFV3P56181 108 aaKnown RBP12.67□□□□□ -0.38
LEMD3-201ENST00000308330 Q6ZUT4 128 aa12.67□□□□□ -0.38
LEMD3-201ENST00000308330 CFHR2P36980 270 aa12.67□□□□□ -0.38
LEMD3-201ENST00000308330 B9A039 149 aa12.67□□□□□ -0.38
LEMD3-201ENST00000308330 MGST3O14880 152 aa12.67□□□□□ -0.38
LEMD3-201ENST00000308330 NDUFA3O95167 84 aa12.67□□□□□ -0.38
LEMD3-201ENST00000308330 PRSS33Q8NF86 280 aa12.67□□□□□ -0.38
LEMD3-201ENST00000308330 CLDN14O95500 239 aa12.66□□□□□ -0.38
LEMD3-201ENST00000308330 CECR9P0C854 216 aa12.66□□□□□ -0.38
LEMD3-201ENST00000308330 LINC01590Q5TEZ4 76 aa12.66□□□□□ -0.38
LEMD3-201ENST00000308330 GTSCR1Q86UQ5 136 aa12.66□□□□□ -0.38
LEMD3-201ENST00000308330 RPP21Q9H633 154 aaKnown RBP12.66□□□□□ -0.38
LEMD3-201ENST00000308330 C8orf88P0DMB2 117 aa12.66□□□□□ -0.38
LEMD3-201ENST00000308330 RPP25LQ8N5L8 163 aaKnown RBP12.66□□□□□ -0.38
LEMD3-201ENST00000308330 ASCL2Q99929 193 aa12.66□□□□□ -0.38
LEMD3-201ENST00000308330 FER1L5A0AVI2 2057 aa12.66□□□□□ -0.38
LEMD3-201ENST00000308330 IGF2RP11717 2491 aa12.66□□□□□ -0.38
LEMD3-201ENST00000308330 PGPA6NDG6 321 aa12.66□□□□□ -0.38
LEMD3-201ENST00000308330 RBP4P02753 201 aa12.66□□□□□ -0.38
LEMD3-201ENST00000308330 ORM1P02763 201 aa12.66□□□□□ -0.38
LEMD3-201ENST00000308330 MT-ATP8P03928 68 aa12.66□□□□□ -0.38
LEMD3-201ENST00000308330 ID3Q02535 119 aa12.66□□□□□ -0.38
LEMD3-201ENST00000308330 FGFRL1Q8N441 504 aa12.66□□□□□ -0.38
LEMD3-201ENST00000308330 PRADC1Q9BSG0 188 aa12.66□□□□□ -0.38
LEMD3-201ENST00000308330 NPIPB13A6NJU9 1138 aa12.66□□□□□ -0.38
LEMD3-201ENST00000308330 NPIPB4C9JG80 1138 aa12.66□□□□□ -0.38
LEMD3-201ENST00000308330 NBL1P41271 181 aa12.66□□□□□ -0.38
LEMD3-201ENST00000308330 REG1BP48304 166 aa12.66□□□□□ -0.38
LEMD3-201ENST00000308330 TMEM170BQ5T4T1 132 aa12.66□□□□□ -0.38
LEMD3-201ENST00000308330 LCNL1Q6ZST4 164 aa12.66□□□□□ -0.38
LEMD3-201ENST00000308330 K7ERJ3 54 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms