RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 Q5BKY6 102 aa16.92■□□□□ 0.3
HOXD4-201ENST00000306324 TEPPQ6URK8 271 aa16.92■□□□□ 0.3
HOXD4-201ENST00000306324 BTNL8Q6UX41 500 aa16.92■□□□□ 0.3
HOXD4-201ENST00000306324 OR51G1Q8NGK1 321 aa16.92■□□□□ 0.3
HOXD4-201ENST00000306324 OR2T35Q8NGX2 323 aa16.92■□□□□ 0.3
HOXD4-201ENST00000306324 UQCC1Q9NVA1 299 aa16.92■□□□□ 0.3
HOXD4-201ENST00000306324 MLXQ9UH92 298 aa16.92■□□□□ 0.3
HOXD4-201ENST00000306324 FBN3Q75N90 2809 aa16.91■□□□□ 0.3
HOXD4-201ENST00000306324 IGHV3OR16-13A0A075B7E8 117 aa16.91■□□□□ 0.3
HOXD4-201ENST00000306324 IGHV3-74A0A0B4J1X5 117 aa16.91■□□□□ 0.3
HOXD4-201ENST00000306324 IGHV7-4-1A0A0J9YVY3 117 aa16.91■□□□□ 0.3
HOXD4-201ENST00000306324 LYL1P12980 280 aa16.91■□□□□ 0.3
HOXD4-201ENST00000306324 RPL12P30050 165 aaKnown RBP16.91■□□□□ 0.3
HOXD4-201ENST00000306324 DEFB114Q30KQ6 69 aa16.91■□□□□ 0.3
HOXD4-201ENST00000306324 OR5C1Q8NGR4 320 aa16.91■□□□□ 0.3
HOXD4-201ENST00000306324 METTL26Q96S19 204 aa16.91■□□□□ 0.3
HOXD4-201ENST00000306324 PBDC1Q9BVG4 233 aa16.91■□□□□ 0.3
HOXD4-201ENST00000306324 TECRQ9NZ01 308 aaKnown RBP16.91■□□□□ 0.3
HOXD4-201ENST00000306324 ZMAT5Q9UDW3 170 aaKnown RBP16.91■□□□□ 0.3
HOXD4-201ENST00000306324 PRB2P02812 416 aaPredicted RBP16.9■□□□□ 0.3
HOXD4-201ENST00000306324 NPPCP23582 126 aa16.9■□□□□ 0.3
HOXD4-201ENST00000306324 ATP6V1FQ16864 119 aa16.9■□□□□ 0.3
HOXD4-201ENST00000306324 CD300EQ496F6 205 aaPredicted RBP16.9■□□□□ 0.3
HOXD4-201ENST00000306324 RNF125Q96EQ8 232 aa16.9■□□□□ 0.3
HOXD4-201ENST00000306324 TMEM147Q9BVK8 224 aa16.9■□□□□ 0.3
HOXD4-201ENST00000306324 SMPXQ9UHP9 88 aa16.9■□□□□ 0.3
HOXD4-201ENST00000306324 UBE2L5PA0A1B0GUS4 154 aa16.89■□□□□ 0.29
HOXD4-201ENST00000306324 GATA2P23769 480 aaPredicted RBP16.89■□□□□ 0.29
HOXD4-201ENST00000306324 LYZP61626 148 aa16.89■□□□□ 0.29
HOXD4-201ENST00000306324 USF2Q15853 346 aaPredicted RBP16.89■□□□□ 0.29
HOXD4-201ENST00000306324 CYP2G1PQ6ZSU1 146 aa16.89■□□□□ 0.29
HOXD4-201ENST00000306324 RHPN1-AS1Q9BWJ2 59 aa16.89■□□□□ 0.29
HOXD4-201ENST00000306324 IGHV3-66A0A0C4DH42 116 aa16.88■□□□□ 0.29
HOXD4-201ENST00000306324 IZUMO1RA6ND01 250 aa16.88■□□□□ 0.29
HOXD4-201ENST00000306324 APOHP02749 345 aaPredicted RBP16.88■□□□□ 0.29
HOXD4-201ENST00000306324 CLINT1Q14677 625 aa16.88■□□□□ 0.29
HOXD4-201ENST00000306324 LCN12Q6JVE5 192 aa16.88■□□□□ 0.29
HOXD4-201ENST00000306324 BPIFCQ8NFQ6 507 aa16.88■□□□□ 0.29
HOXD4-201ENST00000306324 HSPB11Q9Y547 144 aa16.88■□□□□ 0.29
HOXD4-201ENST00000306324 hCG_2014768A0A024R1R8 64 aa16.87■□□□□ 0.29
HOXD4-201ENST00000306324 WI2-2373I1.2A0A1W2PRP0 233 aa16.87■□□□□ 0.29
HOXD4-201ENST00000306324 CHEK1O14757 476 aa16.87■□□□□ 0.29
HOXD4-201ENST00000306324 VWC2Q2TAL6 325 aa16.87■□□□□ 0.29
HOXD4-201ENST00000306324 TMEM182Q6ZP80 229 aaPredicted RBP16.87■□□□□ 0.29
HOXD4-201ENST00000306324 OR2K2Q8NGT1 345 aa16.87■□□□□ 0.29
HOXD4-201ENST00000306324 NARS2Q96I59 477 aaKnown RBP16.87■□□□□ 0.29
HOXD4-201ENST00000306324 RABAC1Q9UI14 185 aa16.87■□□□□ 0.29
HOXD4-201ENST00000306324 ZNF256Q9Y2P7 627 aaPredicted RBP16.87■□□□□ 0.29
HOXD4-201ENST00000306324 LSM4Q9Y4Z0 139 aaKnown RBP16.87■□□□□ 0.29
HOXD4-201ENST00000306324 CRYBB3P26998 211 aa16.86■□□□□ 0.29
HOXD4-201ENST00000306324 BMI1P35226 326 aa16.86■□□□□ 0.29
HOXD4-201ENST00000306324 ST8SIA2Q92186 375 aa16.86■□□□□ 0.29
HOXD4-201ENST00000306324 WDR83OSQ9Y284 106 aa16.86■□□□□ 0.29
HOXD4-201ENST00000306324 MEGF8Q7Z7M0 2845 aa16.86■□□□□ 0.29
HOXD4-201ENST00000306324 FXYD6-FXYD2A0A087WZ82 144 aa16.86■□□□□ 0.29
HOXD4-201ENST00000306324 AGPAT2O15120 278 aa16.86■□□□□ 0.29
HOXD4-201ENST00000306324 CFDP00746 253 aaPredicted RBP16.86■□□□□ 0.29
HOXD4-201ENST00000306324 HNRNPCP07910 306 aaKnown RBP eCLIP16.86■□□□□ 0.29
HOXD4-201ENST00000306324 NUP62P37198 522 aaPredicted RBP16.86■□□□□ 0.29
HOXD4-201ENST00000306324 SELENOTP62341 195 aa16.86■□□□□ 0.29
HOXD4-201ENST00000306324 DEFA6Q01524 100 aa16.86■□□□□ 0.29
HOXD4-201ENST00000306324 RBPMS2Q6ZRY4 209 aaKnown RBP16.86■□□□□ 0.29
HOXD4-201ENST00000306324 TMEM61Q8N0U2 210 aa16.86■□□□□ 0.29
HOXD4-201ENST00000306324 PRR25Q96S07 402 aa16.86■□□□□ 0.29
HOXD4-201ENST00000306324 RNF2Q99496 336 aa16.86■□□□□ 0.29
HOXD4-201ENST00000306324 MGST2Q99735 147 aa16.86■□□□□ 0.29
HOXD4-201ENST00000306324 SMIM3Q9BZL3 60 aa16.86■□□□□ 0.29
HOXD4-201ENST00000306324 A0A1W2PS18 150 aa16.85■□□□□ 0.29
HOXD4-201ENST00000306324 SMLR1H3BR10 107 aa16.85■□□□□ 0.29
HOXD4-201ENST00000306324 GP9P14770 177 aa16.85■□□□□ 0.29
HOXD4-201ENST00000306324 RAB31Q13636 194 aa16.85■□□□□ 0.29
HOXD4-201ENST00000306324 TMEM231Q9H6L2 316 aa16.85■□□□□ 0.29
HOXD4-201ENST00000306324 AURKAIP1Q9NWT8 199 aaPredicted RBP16.85■□□□□ 0.29
HOXD4-201ENST00000306324 LINC00869P0C866 280 aa16.84■□□□□ 0.29
HOXD4-201ENST00000306324 ORM2P19652 201 aa16.84■□□□□ 0.29
HOXD4-201ENST00000306324 FGF7P21781 194 aa16.84■□□□□ 0.29
HOXD4-201ENST00000306324 CAMLGP49069 296 aa16.84■□□□□ 0.29
HOXD4-201ENST00000306324 GUCA2BQ16661 112 aa16.84■□□□□ 0.29
HOXD4-201ENST00000306324 ZNF546Q86UE3 836 aa16.84■□□□□ 0.29
HOXD4-201ENST00000306324 VSIRQ9H7M9 311 aa16.84■□□□□ 0.29
HOXD4-201ENST00000306324 G3V3Q6 166 aa16.83■□□□□ 0.28
HOXD4-201ENST00000306324 EIF2B2P49770 351 aaKnown RBP16.83■□□□□ 0.28
HOXD4-201ENST00000306324 LAMTOR1Q6IAA8 161 aa16.83■□□□□ 0.28
HOXD4-201ENST00000306324 INO80EQ8NBZ0 244 aaPredicted RBP16.83■□□□□ 0.28
HOXD4-201ENST00000306324 OR1B1Q8NGR6 318 aa16.83■□□□□ 0.28
HOXD4-201ENST00000306324 GRAMD2BQ96HH9 432 aa16.83■□□□□ 0.28
HOXD4-201ENST00000306324 ATP5SQ99766 215 aa16.83■□□□□ 0.28
HOXD4-201ENST00000306324 PPP1R14BQ96C90 147 aa16.82■□□□□ 0.28
HOXD4-201ENST00000306324 AQP10Q96PS8 301 aa16.82■□□□□ 0.28
HOXD4-201ENST00000306324 GGTLC1Q9BX51 225 aa16.82■□□□□ 0.28
HOXD4-201ENST00000306324 DOK5Q9P104 306 aa16.82■□□□□ 0.28
HOXD4-201ENST00000306324 SLC45A2Q9UMX9 530 aa16.82■□□□□ 0.28
HOXD4-201ENST00000306324 U3KQE9 123 aa16.82■□□□□ 0.28
HOXD4-201ENST00000306324 TRAV25A0A0B4J276 109 aa16.81■□□□□ 0.28
HOXD4-201ENST00000306324 DFFBO76075 338 aa16.81■□□□□ 0.28
HOXD4-201ENST00000306324 TCF24Q7RTU0 167 aa16.81■□□□□ 0.28
HOXD4-201ENST00000306324 PFDN2Q9UHV9 154 aa16.81■□□□□ 0.28
HOXD4-201ENST00000306324 IGKV3-7A0A075B6H7 116 aa16.8■□□□□ 0.28
HOXD4-201ENST00000306324 ZNF785A8K8V0 405 aa16.8■□□□□ 0.28
HOXD4-201ENST00000306324 MPDU1O75352 247 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms