RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 PPIAL4GP0DN37 164 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 USF1P22415 310 aaPredicted RBP4.32□□□□□ -1.72
VPS50-202ENST00000305866 LOXP28300 417 aaPredicted RBP4.32□□□□□ -1.72
VPS50-202ENST00000305866 ERVK-16P61578 105 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 C21orf62-AS1Q17RA5 79 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 FAM106AQ4KMX7 169 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 TMEM155Q4W5P6 130 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 LEMD1Q68G75 181 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 ZNF493Q6ZR52 646 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 ATOH7Q8N100 152 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 TEX45Q8NA69 505 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 TMEM116Q8NCL8 245 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 PIFOQ8TCI5 191 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 TRGV9Q99603 122 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 ARFGEF3Q5TH69 2177 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 TMEM178BH3BS89 294 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 M0R1X1 148 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 HAX1O00165 279 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 SLC35B1P78383 322 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 IBA57Q5T440 356 aaKnown RBP4.32□□□□□ -1.72
VPS50-202ENST00000305866 OR5T1Q8NG75 326 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 OR2D3Q8NGH3 330 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 H1FXQ92522 213 aaKnown RBP4.32□□□□□ -1.72
VPS50-202ENST00000305866 DPF1Q92782 380 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 CLEC5AQ9NY25 188 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 SOX21Q9Y651 276 aaPredicted RBP4.32□□□□□ -1.72
VPS50-202ENST00000305866 OR2T8A6NH00 312 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 KLK10O43240 276 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 IGLV1-47P01700 117 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 PYYP10082 97 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 RAB31Q13636 194 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 DIAPH2-AS1Q14236 149 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 ADIPOQQ15848 244 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 PRAMEF5Q5TYX0 476 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 LHFPL4Q7Z7J7 247 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 C22orf15Q8WYQ4 148 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 LEAP2Q969E1 77 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 SSBP4Q9BWG4 385 aaPredicted RBP4.32□□□□□ -1.72
VPS50-202ENST00000305866 ST20Q9HBF5 79 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 IGHV3-64DA0A0J9YX35 117 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 hADV38S2A0JD32 116 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 C17orf100A8MU93 164 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 ZNF705FA8MVS1 300 aaPredicted RBP4.31□□□□□ -1.72
VPS50-202ENST00000305866 APCSP02743 223 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 NBEAP1P0C6P0 100 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 ZNF705DP0CH99 300 aaPredicted RBP4.31□□□□□ -1.72
VPS50-202ENST00000305866 ZNF705BP0CI00 300 aaPredicted RBP4.31□□□□□ -1.72
VPS50-202ENST00000305866 NBL1P41271 181 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 GPR6P46095 362 aaPredicted RBP4.31□□□□□ -1.72
VPS50-202ENST00000305866 GNG4P50150 75 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 LOXL1Q08397 574 aaPredicted RBP4.31□□□□□ -1.72
VPS50-202ENST00000305866 PMCHL1Q16048 86 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 ZNF672Q499Z4 452 aaPredicted RBP4.31□□□□□ -1.72
VPS50-202ENST00000305866 MPV17L2Q567V2 206 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 PRR31Q5SQ13 230 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 ZADH2Q8N4Q0 377 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 ZNRF1Q8ND25 227 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 OR2T6Q8NHC8 308 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 RFESDQ8TAC1 157 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 CSTL1Q9H114 145 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 CST9LQ9H4G1 147 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 LOC102724200A0A096LPH7 203 aaPredicted RBP4.31□□□□□ -1.72
VPS50-202ENST00000305866 TCRBV4S1A1TA0A5B7 111 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 hDV102S1A0JD36 115 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 F8W735 103 aaPredicted RBP4.31□□□□□ -1.72
VPS50-202ENST00000305866 FCGR2BP31994 310 aaPredicted RBP4.31□□□□□ -1.72
VPS50-202ENST00000305866 PSG5Q15238 335 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 SIGLECL1Q8N7X8 197 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 VSTM2AQ8TAG5 236 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 IGFBPL1Q8WX77 278 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 CHCHD1Q96BP2 118 aaKnown RBP4.31□□□□□ -1.72
VPS50-202ENST00000305866 ZC2HC1AQ96GY0 325 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 SSBP3Q9BWW4 388 aaPredicted RBP4.31□□□□□ -1.72
VPS50-202ENST00000305866 MOSP00540 346 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 SAA1P0DJI8 122 aaPredicted RBP4.31□□□□□ -1.72
VPS50-202ENST00000305866 C8orf88P0DMB2 117 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 APOBEC3AP31941 199 aaPredicted RBP4.31□□□□□ -1.72
VPS50-202ENST00000305866 MC5RP33032 325 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 CA7P43166 264 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 LGALS7P47929 136 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 AMTP48728 403 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 KRTDAPP60985 99 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 UBE2G1P62253 170 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 SRSF2Q01130 221 aaKnown RBP4.31□□□□□ -1.72
VPS50-202ENST00000305866 OCIAD2Q56VL3 154 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 TMEM200BQ69YZ2 307 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 MOGAT3Q86VF5 341 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 FAM103A1Q9BTL3 118 aaKnown RBP4.31□□□□□ -1.72
VPS50-202ENST00000305866 ZNF430Q9H8G1 570 aaPredicted RBP4.31□□□□□ -1.72
VPS50-202ENST00000305866 NAT8BQ9UHF3 227 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 INSIG2Q9Y5U4 225 aa4.31□□□□□ -1.72
VPS50-202ENST00000305866 MUC21A0A0G2JKD1 596 aa4.3□□□□□ -1.72
VPS50-202ENST00000305866 MUC21A0A140T8X8 626 aa4.3□□□□□ -1.72
VPS50-202ENST00000305866 VSTM5A8MXK1 200 aa4.3□□□□□ -1.72
VPS50-202ENST00000305866 SHISA9B4DS77 424 aa4.3□□□□□ -1.72
VPS50-202ENST00000305866 TEX22C9J3V5 150 aa4.3□□□□□ -1.72
VPS50-202ENST00000305866 PEX7O00628 323 aa4.3□□□□□ -1.72
VPS50-202ENST00000305866 HINT1P49773 126 aaPredicted RBP4.3□□□□□ -1.72
VPS50-202ENST00000305866 MUC21Q5SSG8 566 aa4.3□□□□□ -1.72
VPS50-202ENST00000305866 Q6ZN92 141 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms