RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 ODAMA1E959 279 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 RNF223E7ERA6 249 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 IGHV1-8P0DP01 117 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 SULT1A2P50226 295 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 PIGPP57054 158 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 SPNS3Q6ZMD2 512 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 SIGLECL1Q8N7X8 197 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 LHX4Q969G2 390 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 CCDC140Q96MF4 163 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 KLK15Q9H2R5 256 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 A0A0U1RQK1 487 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 ZNF320A2RRD8 509 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 UPK2O00526 184 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 TNFSF12O43508 249 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 SPRY3O43610 288 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 PMCHP20382 165 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 DEFB1P60022 68 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 C21orf62-AS1Q17RA5 79 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 Q6ZN92 141 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 TMED6Q8WW62 240 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 RBPMSQ93062 196 aaKnown RBP4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 CCL19Q99731 98 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 UBTD1Q9HAC8 227 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 TMEM106BQ9NUM4 274 aa4.34□□□□□ -1.71
TOPBP1-201ENST00000260810 CXorf1O96002 111 aa4.34□□□□□ -1.72
TOPBP1-201ENST00000260810 MT-ND6P03923 174 aa4.34□□□□□ -1.72
TOPBP1-201ENST00000260810 USF1P22415 310 aaPredicted RBP4.34□□□□□ -1.72
TOPBP1-201ENST00000260810 GATA3P23771 443 aa4.34□□□□□ -1.72
TOPBP1-201ENST00000260810 SLC38A11Q08AI6 406 aa4.34□□□□□ -1.72
TOPBP1-201ENST00000260810 WDR25Q64LD2 544 aaPredicted RBP4.34□□□□□ -1.72
TOPBP1-201ENST00000260810 LURAP1Q96LR2 239 aa4.34□□□□□ -1.72
TOPBP1-201ENST00000260810 CHODLQ9H9P2 273 aa4.34□□□□□ -1.72
TOPBP1-201ENST00000260810 K7EIM0 57 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 M0R143 59 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 HEPN1Q6WQI6 88 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 LIAT1Q6ZQX7 453 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 BAP18Q8IXM2 172 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 HMCN2Q8NDA2 5059 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 GNG7O60262 68 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 OR7C2O60412 319 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 CEACAM6P40199 344 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 OPRK1P41145 380 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 LPAR6P43657 344 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 RND3P61587 244 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 RAB32Q13637 225 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 AANATQ16613 207 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 RNF5Q99942 180 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 ALKBH7Q9BT30 221 aaPredicted RBP4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 HSPB8Q9UJY1 196 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 IGKV1-17P01599 117 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 DLK1P80370 383 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 SERF2P84101 59 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 RRN3P1Q2M238 152 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 RAB24Q969Q5 203 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 C14orf79Q96F83 325 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 SLC25A10Q9UBX3 287 aaPredicted RBP4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 HSPB7Q9UBY9 170 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 HIGD1AQ9Y241 93 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 IGHV7-81A0A0B4J1V7 117 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 KBTBD11-OT1A0A1B0GTJ5 212 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 TMEM238LA0A1B0GVL6 79 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 A1L4Q6 167 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 A6NJY4 79 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 NDUFS8O00217 210 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 ISLRO14498 428 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 GATCO43716 136 aaKnown RBP4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 GGCTO75223 188 aaKnown RBP4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 KIR3DS1Q14943 382 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 ADIRFQ15847 76 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 R3HDM4Q96D70 268 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 PMCHL2Q9BQD1 86 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 SLC25A33Q9BSK2 321 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 TMEM208Q9BTX3 173 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 INSIG2Q9Y5U4 225 aa4.33□□□□□ -1.72
TOPBP1-201ENST00000260810 MFSD2BA6NFX1 497 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 ZNF727A8MUV8 499 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 OPN1MWP04001 364 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 RBMY1A1P0DJD3 496 aaKnown RBP4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 RBMY1CP0DJD4 496 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 OPN1MW2P0DN77 364 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 OPN1MW3P0DN78 364 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 BTF3P20290 206 aaKnown RBP4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 GNG4P50150 75 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 NDUFA6P56556 154 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 RBMY1FQ15415 496 aaKnown RBP4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 TBC1D26Q86UD7 250 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 NPBQ8NG41 125 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 NDUFA4L2Q9NRX3 87 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 NAT8Q9UHE5 227 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 OR2W1Q9Y3N9 320 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 CDC34P49427 236 aaPredicted RBP4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 CRIP1P50238 77 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 ZNF345Q14585 488 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 IQCJQ1A5X6 159 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 AMMECR1LQ6DCA0 310 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 OR2T10Q8NGZ9 312 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 NOL4LQ96MY1 436 aaPredicted RBP4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 ATG101Q9BSB4 218 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 COA4Q9NYJ1 87 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 H0Y980 276 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms