RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 MED13LQ71F56 2210 aa18.34■□□□□ 0.53
MSX2-201ENST00000239243 TOMM40O96008 361 aa18.34■□□□□ 0.53
MSX2-201ENST00000239243 KLF17Q5JT82 389 aaPredicted RBP18.34■□□□□ 0.53
MSX2-201ENST00000239243 ELOVL1Q9BW60 279 aa18.34■□□□□ 0.53
MSX2-201ENST00000239243 C5orf52A6NGY3 159 aa18.33■□□□□ 0.53
MSX2-201ENST00000239243 GNG7O60262 68 aa18.33■□□□□ 0.53
MSX2-201ENST00000239243 SCGB2A1O75556 95 aa18.33■□□□□ 0.53
MSX2-201ENST00000239243 S100A7AQ86SG5 101 aa18.33■□□□□ 0.53
MSX2-201ENST00000239243 MSMBP08118 114 aa18.33■□□□□ 0.52
MSX2-201ENST00000239243 HIST1H1BP16401 226 aaKnown RBP18.33■□□□□ 0.52
MSX2-201ENST00000239243 SNRPEP62304 92 aaKnown RBP18.33■□□□□ 0.52
MSX2-201ENST00000239243 CENPWQ5EE01 88 aa18.33■□□□□ 0.52
MSX2-201ENST00000239243 TEX38Q6PEX7 206 aa18.33■□□□□ 0.52
MSX2-201ENST00000239243 SGMS2Q8NHU3 365 aa18.33■□□□□ 0.52
MSX2-201ENST00000239243 EGR2P11161 476 aaPredicted RBP18.32■□□□□ 0.52
MSX2-201ENST00000239243 YPEL3P61236 119 aaPredicted RBP18.32■□□□□ 0.52
MSX2-201ENST00000239243 OR10G8Q8NGN5 311 aa18.32■□□□□ 0.52
MSX2-201ENST00000239243 SRD5A3Q9H8P0 318 aa18.32■□□□□ 0.52
MSX2-201ENST00000239243 MRPL27Q9P0M9 148 aaKnown RBP18.32■□□□□ 0.52
MSX2-201ENST00000239243 TRAV40A0A0B4J280 105 aa18.31■□□□□ 0.52
MSX2-201ENST00000239243 GGCTO75223 188 aaKnown RBP18.31■□□□□ 0.52
MSX2-201ENST00000239243 SLC25A16P16260 332 aa18.31■□□□□ 0.52
MSX2-201ENST00000239243 ZNF329Q86UD4 541 aa18.31■□□□□ 0.52
MSX2-201ENST00000239243 TMEM68Q96MH6 324 aa18.31■□□□□ 0.52
MSX2-201ENST00000239243 SLC25A39Q9BZJ4 359 aaPredicted RBP18.31■□□□□ 0.52
MSX2-201ENST00000239243 MYO18BQ8IUG5 2567 aa18.31■□□□□ 0.52
MSX2-201ENST00000239243 PPP5D1E7EU14 171 aa18.31■□□□□ 0.52
MSX2-201ENST00000239243 NBEAP1P0C6P0 100 aa18.31■□□□□ 0.52
MSX2-201ENST00000239243 GP9P14770 177 aa18.31■□□□□ 0.52
MSX2-201ENST00000239243 TAS2R60P59551 318 aa18.31■□□□□ 0.52
MSX2-201ENST00000239243 C21orf62Q9NYP8 219 aa18.31■□□□□ 0.52
MSX2-201ENST00000239243 TMEM14CQ9P0S9 112 aa18.31■□□□□ 0.52
MSX2-201ENST00000239243 TRGC2P03986 189 aa18.3■□□□□ 0.52
MSX2-201ENST00000239243 FAM110DQ8TAY7 271 aaPredicted RBP18.3■□□□□ 0.52
MSX2-201ENST00000239243 COL12A1Q99715 3063 aa18.3■□□□□ 0.52
MSX2-201ENST00000239243 A0A1W2PPQ1 181 aa18.3■□□□□ 0.52
MSX2-201ENST00000239243 AP4M1O00189 453 aa18.3■□□□□ 0.52
MSX2-201ENST00000239243 HNF1AP20823 631 aa18.3■□□□□ 0.52
MSX2-201ENST00000239243 CNN1P51911 297 aaKnown RBP18.3■□□□□ 0.52
MSX2-201ENST00000239243 FOXL1Q12952 345 aa18.3■□□□□ 0.52
MSX2-201ENST00000239243 HSPB9Q9BQS6 159 aa18.3■□□□□ 0.52
MSX2-201ENST00000239243 CDC42EP3Q9UKI2 254 aa18.3■□□□□ 0.52
MSX2-201ENST00000239243 B4DSR2 109 aa18.29■□□□□ 0.52
MSX2-201ENST00000239243 K7EN84 100 aa18.29■□□□□ 0.52
MSX2-201ENST00000239243 UBE2CO00762 179 aa18.29■□□□□ 0.52
MSX2-201ENST00000239243 MYCNOSP40205 109 aa18.29■□□□□ 0.52
MSX2-201ENST00000239243 MEGF9Q9H1U4 602 aa18.29■□□□□ 0.52
MSX2-201ENST00000239243 ABCA2Q9BZC7 2435 aa18.29■□□□□ 0.52
MSX2-201ENST00000239243 PEX7O00628 323 aa18.29■□□□□ 0.52
MSX2-201ENST00000239243 SRSF1Q07955 248 aaKnown RBP eCLIP18.29■□□□□ 0.52
MSX2-201ENST00000239243 Q56UQ5 140 aa18.29■□□□□ 0.52
MSX2-201ENST00000239243 TMEM190Q8WZ59 177 aa18.29■□□□□ 0.52
MSX2-201ENST00000239243 RNF125Q96EQ8 232 aa18.29■□□□□ 0.52
MSX2-201ENST00000239243 TXN2Q99757 166 aa18.29■□□□□ 0.52
MSX2-201ENST00000239243 TMUB1Q9BVT8 246 aa18.29■□□□□ 0.52
MSX2-201ENST00000239243 ZNF462Q96JM2 2506 aa18.28■□□□□ 0.52
MSX2-201ENST00000239243 GATA3P23771 443 aa18.28■□□□□ 0.52
MSX2-201ENST00000239243 FAM3BP58499 235 aaPredicted RBP18.28■□□□□ 0.52
MSX2-201ENST00000239243 RANP62826 216 aaKnown RBP18.28■□□□□ 0.52
MSX2-201ENST00000239243 UNQ5815/PRO19632Q6UWF5 114 aa18.28■□□□□ 0.52
MSX2-201ENST00000239243 ZNF491Q8N8L2 437 aa18.28■□□□□ 0.52
MSX2-201ENST00000239243 BLNKQ8WV28 456 aa18.28■□□□□ 0.52
MSX2-201ENST00000239243 RNF24Q9Y225 148 aa18.28■□□□□ 0.52
MSX2-201ENST00000239243 MOB4Q9Y3A3 225 aa18.28■□□□□ 0.52
MSX2-201ENST00000239243 FCGR2BP31994 310 aaPredicted RBP18.27■□□□□ 0.52
MSX2-201ENST00000239243 AKR1D1P51857 326 aa18.27■□□□□ 0.52
MSX2-201ENST00000239243 KLK9Q2XQG4 91 aa18.27■□□□□ 0.52
MSX2-201ENST00000239243 C5orf56Q8N8D9 126 aa18.27■□□□□ 0.52
MSX2-201ENST00000239243 VN1R17PQ8TDU5 208 aa18.27■□□□□ 0.52
MSX2-201ENST00000239243 IGF2BP2-AS1Q96M15 143 aa18.27■□□□□ 0.52
MSX2-201ENST00000239243 SHANK2-AS3Q9BTD1 123 aa18.27■□□□□ 0.52
MSX2-201ENST00000239243 C7orf69Q9H7B7 122 aa18.27■□□□□ 0.52
MSX2-201ENST00000239243 KLK9Q9UKQ9 250 aa18.27■□□□□ 0.52
MSX2-201ENST00000239243 WI2-2373I1.2A0A1W2PRP0 233 aa18.27■□□□□ 0.52
MSX2-201ENST00000239243 ATP6V0E1O15342 81 aa18.27■□□□□ 0.52
MSX2-201ENST00000239243 OR2J3O76001 311 aa18.27■□□□□ 0.52
MSX2-201ENST00000239243 NDUFB8O95169 186 aa18.27■□□□□ 0.52
MSX2-201ENST00000239243 TYMSP04818 313 aa18.27■□□□□ 0.52
MSX2-201ENST00000239243 IL4P05112 153 aa18.27■□□□□ 0.52
MSX2-201ENST00000239243 CLEC12BQ2HXU8 276 aa18.27■□□□□ 0.52
MSX2-201ENST00000239243 ZNF600Q6ZNG1 722 aa18.27■□□□□ 0.52
MSX2-201ENST00000239243 ZFYVE26Q68DK2 2539 aa18.26■□□□□ 0.51
MSX2-201ENST00000239243 IGHV3OR16-10A0A075B7F0 116 aa18.26■□□□□ 0.51
MSX2-201ENST00000239243 FBXL7Q9UJT9 491 aa18.26■□□□□ 0.51
MSX2-201ENST00000239243 TRAV20A0A0B4J274 112 aa18.26■□□□□ 0.51
MSX2-201ENST00000239243 H3BRN7 92 aa18.26■□□□□ 0.51
MSX2-201ENST00000239243 HIST1H1EP10412 219 aaKnown RBP18.26■□□□□ 0.51
MSX2-201ENST00000239243 ERVFC1-1P60608 527 aa18.26■□□□□ 0.51
MSX2-201ENST00000239243 FABP9Q0Z7S8 132 aa18.26■□□□□ 0.51
MSX2-201ENST00000239243 ECSCRQ19T08 205 aa18.26■□□□□ 0.51
MSX2-201ENST00000239243 LEMD1Q68G75 181 aa18.26■□□□□ 0.51
MSX2-201ENST00000239243 BRD3OSQ6XYD6 125 aa18.26■□□□□ 0.51
MSX2-201ENST00000239243 NRGNQ92686 78 aa18.26■□□□□ 0.51
MSX2-201ENST00000239243 BPIFA4PQ86YQ2 179 aa18.25■□□□□ 0.51
MSX2-201ENST00000239243 EPDR1Q9UM22 224 aa18.25■□□□□ 0.51
MSX2-201ENST00000239243 TRAV9-1A0A075B6T8 112 aa18.25■□□□□ 0.51
MSX2-201ENST00000239243 PGPA6NDG6 321 aa18.25■□□□□ 0.51
MSX2-201ENST00000239243 F8W735 103 aaPredicted RBP18.25■□□□□ 0.51
MSX2-201ENST00000239243 HIST1H2BKO60814 126 aa18.25■□□□□ 0.51
MSX2-201ENST00000239243 GCGP01275 180 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms