RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 REG1BP48304 166 aa16.24■□□□□ 0.19
SYNGAP1-227ENST00000638142 Q6ZN92 141 aa16.24■□□□□ 0.19
SYNGAP1-227ENST00000638142 FXYD5Q96DB9 178 aa16.24■□□□□ 0.19
SYNGAP1-227ENST00000638142 TXN2Q99757 166 aa16.24■□□□□ 0.19
SYNGAP1-227ENST00000638142 ICE1Q9Y2F5 2266 aa16.24■□□□□ 0.19
SYNGAP1-227ENST00000638142 FSTL3O95633 263 aa16.24■□□□□ 0.19
SYNGAP1-227ENST00000638142 CEACAM8P31997 349 aaPredicted RBP16.24■□□□□ 0.19
SYNGAP1-227ENST00000638142 HNRNPA3P51991 378 aaKnown RBP16.24■□□□□ 0.19
SYNGAP1-227ENST00000638142 MFAP2P55001 183 aa16.24■□□□□ 0.19
SYNGAP1-227ENST00000638142 STPG4Q8N801 248 aa16.24■□□□□ 0.19
SYNGAP1-227ENST00000638142 NUDT10Q8NFP7 164 aa16.24■□□□□ 0.19
SYNGAP1-227ENST00000638142 OR10X1Q8NGY0 326 aa16.24■□□□□ 0.19
SYNGAP1-227ENST00000638142 BORCS7Q96B45 105 aa16.24■□□□□ 0.19
SYNGAP1-227ENST00000638142 TMEM186Q96B77 213 aa16.24■□□□□ 0.19
SYNGAP1-227ENST00000638142 NUDT11Q96G61 164 aa16.24■□□□□ 0.19
SYNGAP1-227ENST00000638142 LAMTOR2Q9Y2Q5 125 aa16.24■□□□□ 0.19
SYNGAP1-227ENST00000638142 TMEM200BQ69YZ2 307 aa16.23■□□□□ 0.19
SYNGAP1-227ENST00000638142 IGF2-ASQ6U949 168 aa16.23■□□□□ 0.19
SYNGAP1-227ENST00000638142 C8orf31Q8N9H6 132 aa16.23■□□□□ 0.19
SYNGAP1-227ENST00000638142 NUP35Q8NFH5 326 aa16.23■□□□□ 0.19
SYNGAP1-227ENST00000638142 HIST1H1EP10412 219 aaKnown RBP16.23■□□□□ 0.19
SYNGAP1-227ENST00000638142 SPACA3Q8IXA5 215 aa16.23■□□□□ 0.19
SYNGAP1-227ENST00000638142 LINC00311Q8N616 119 aa16.23■□□□□ 0.19
SYNGAP1-227ENST00000638142 RBMXL3Q8N7X1 1067 aaKnown RBP16.23■□□□□ 0.19
SYNGAP1-227ENST00000638142 STXBP6Q8NFX7 210 aa16.23■□□□□ 0.19
SYNGAP1-227ENST00000638142 TRAV34A0A0B4J273 112 aa16.22■□□□□ 0.19
SYNGAP1-227ENST00000638142 MYCNOSP40205 109 aa16.22■□□□□ 0.19
SYNGAP1-227ENST00000638142 C10orf55Q5SWW7 151 aa16.22■□□□□ 0.19
SYNGAP1-227ENST00000638142 TMEM108Q6UXF1 575 aa16.22■□□□□ 0.19
SYNGAP1-227ENST00000638142 FAM19A2Q8N3H0 131 aa16.22■□□□□ 0.19
SYNGAP1-227ENST00000638142 ZNF596Q8TC21 504 aa16.22■□□□□ 0.19
SYNGAP1-227ENST00000638142 SMIM12Q96EX1 92 aa16.22■□□□□ 0.19
SYNGAP1-227ENST00000638142 WASHC3Q9Y3C0 194 aa16.22■□□□□ 0.19
SYNGAP1-227ENST00000638142 C17orf100A8MU93 164 aa16.22■□□□□ 0.19
SYNGAP1-227ENST00000638142 IGLV2-23P01705 113 aa16.22■□□□□ 0.19
SYNGAP1-227ENST00000638142 KLF5Q13887 457 aaPredicted RBP16.22■□□□□ 0.19
SYNGAP1-227ENST00000638142 Q6ZS92 163 aa16.22■□□□□ 0.19
SYNGAP1-227ENST00000638142 SAP30LQ9HAJ7 183 aa16.22■□□□□ 0.19
SYNGAP1-227ENST00000638142 NDUFB8O95169 186 aa16.21■□□□□ 0.19
SYNGAP1-227ENST00000638142 NTF3P20783 257 aa16.21■□□□□ 0.19
SYNGAP1-227ENST00000638142 LINC00305Q7Z4B0 112 aa16.21■□□□□ 0.19
SYNGAP1-227ENST00000638142 C7orf69Q9H7B7 122 aa16.21■□□□□ 0.19
SYNGAP1-227ENST00000638142 SSUH2Q9Y2M2 353 aa16.21■□□□□ 0.19
SYNGAP1-227ENST00000638142 OR2J3O76001 311 aa16.21■□□□□ 0.18
SYNGAP1-227ENST00000638142 PMCHL1Q16048 86 aa16.21■□□□□ 0.18
SYNGAP1-227ENST00000638142 ATP5L2Q7Z4Y8 100 aa16.21■□□□□ 0.18
SYNGAP1-227ENST00000638142 UBE2G1P62253 170 aa16.2■□□□□ 0.18
SYNGAP1-227ENST00000638142 VMA21Q3ZAQ7 101 aa16.2■□□□□ 0.18
SYNGAP1-227ENST00000638142 GDF5OSQ5U4N7 250 aa16.2■□□□□ 0.18
SYNGAP1-227ENST00000638142 ZCCHC24Q8N2G6 241 aaKnown RBP16.2■□□□□ 0.18
SYNGAP1-227ENST00000638142 ORAOV1Q8WV07 137 aa16.2■□□□□ 0.18
SYNGAP1-227ENST00000638142 ST6GALNAC6Q969X2 333 aa16.2■□□□□ 0.18
SYNGAP1-227ENST00000638142 PERPQ96FX8 193 aa16.2■□□□□ 0.18
SYNGAP1-227ENST00000638142 WNT10AQ9GZT5 417 aa16.2■□□□□ 0.18
SYNGAP1-227ENST00000638142 MRPS16Q9Y3D3 137 aaKnown RBP16.2■□□□□ 0.18
SYNGAP1-227ENST00000638142 FCN3O75636 299 aa16.2■□□□□ 0.18
SYNGAP1-227ENST00000638142 MRPL36Q9P0J6 103 aaKnown RBP16.2■□□□□ 0.18
SYNGAP1-227ENST00000638142 EPDR1Q9UM22 224 aa16.2■□□□□ 0.18
SYNGAP1-227ENST00000638142 PPIAL4EA0A075B759 164 aa16.19■□□□□ 0.18
SYNGAP1-227ENST00000638142 PPIAL4DF5H284 164 aa16.19■□□□□ 0.18
SYNGAP1-227ENST00000638142 IGHV3-48P01763 117 aa16.19■□□□□ 0.18
SYNGAP1-227ENST00000638142 PPIAL4FP0DN26 164 aa16.19■□□□□ 0.18
SYNGAP1-227ENST00000638142 ZNF137PP52743 207 aa16.19■□□□□ 0.18
SYNGAP1-227ENST00000638142 DIAPH2-AS1Q14236 149 aa16.19■□□□□ 0.18
SYNGAP1-227ENST00000638142 ADIPOQQ15848 244 aa16.19■□□□□ 0.18
SYNGAP1-227ENST00000638142 ASPHD1Q5U4P2 390 aa16.19■□□□□ 0.18
SYNGAP1-227ENST00000638142 ETFRF1Q6IPR1 90 aa16.19■□□□□ 0.18
SYNGAP1-227ENST00000638142 PRR27Q6MZM9 219 aa16.19■□□□□ 0.18
SYNGAP1-227ENST00000638142 CLEC7AQ9BXN2 247 aa16.19■□□□□ 0.18
SYNGAP1-227ENST00000638142 PPIAL4AQ9Y536 164 aa16.19■□□□□ 0.18
SYNGAP1-227ENST00000638142 HIGD1CA8MV81 97 aa16.19■□□□□ 0.18
SYNGAP1-227ENST00000638142 TCF21O43680 179 aa16.19■□□□□ 0.18
SYNGAP1-227ENST00000638142 HSBP1O75506 76 aa16.19■□□□□ 0.18
SYNGAP1-227ENST00000638142 H1FXQ92522 213 aaKnown RBP16.19■□□□□ 0.18
SYNGAP1-227ENST00000638142 KLF12Q9Y4X4 402 aa16.19■□□□□ 0.18
SYNGAP1-227ENST00000638142 A0A1W2PPI3 338 aa16.18■□□□□ 0.18
SYNGAP1-227ENST00000638142 TSPOP30536 169 aa16.18■□□□□ 0.18
SYNGAP1-227ENST00000638142 CA7P43166 264 aa16.18■□□□□ 0.18
SYNGAP1-227ENST00000638142 TNXAQ16473 311 aa16.18■□□□□ 0.18
SYNGAP1-227ENST00000638142 ALKBH7Q9BT30 221 aaPredicted RBP16.18■□□□□ 0.18
SYNGAP1-227ENST00000638142 TMEM178BH3BS89 294 aa16.18■□□□□ 0.18
SYNGAP1-227ENST00000638142 NDUFB3O43676 98 aa16.18■□□□□ 0.18
SYNGAP1-227ENST00000638142 SLC25A5P05141 298 aaKnown RBP16.18■□□□□ 0.18
SYNGAP1-227ENST00000638142 MC5RP33032 325 aa16.18■□□□□ 0.18
SYNGAP1-227ENST00000638142 GNG5P63218 68 aa16.18■□□□□ 0.18
SYNGAP1-227ENST00000638142 LRRC10Q5BKY1 277 aa16.18■□□□□ 0.18
SYNGAP1-227ENST00000638142 FAM57AQ8TBR7 257 aa16.18■□□□□ 0.18
SYNGAP1-227ENST00000638142 TNFRSF19Q9NS68 423 aa16.18■□□□□ 0.18
SYNGAP1-227ENST00000638142 C20orf202A1L168 122 aa16.17■□□□□ 0.18
SYNGAP1-227ENST00000638142 SLC25A17O43808 307 aa16.17■□□□□ 0.18
SYNGAP1-227ENST00000638142 CRYGCP07315 174 aa16.17■□□□□ 0.18
SYNGAP1-227ENST00000638142 A0A1B0GXF2 115 aa16.17■□□□□ 0.18
SYNGAP1-227ENST00000638142 PLAUP00749 431 aa16.17■□□□□ 0.18
SYNGAP1-227ENST00000638142 PVRIGQ6DKI7 326 aa16.17■□□□□ 0.18
SYNGAP1-227ENST00000638142 ZNF841Q6ZN19 808 aa16.17■□□□□ 0.18
SYNGAP1-227ENST00000638142 GPR82Q96P67 336 aa16.17■□□□□ 0.18
SYNGAP1-227ENST00000638142 TRGV9Q99603 122 aa16.17■□□□□ 0.18
SYNGAP1-227ENST00000638142 LGALS7P47929 136 aa16.16■□□□□ 0.18
SYNGAP1-227ENST00000638142 PGPA6NDG6 321 aa16.16■□□□□ 0.18
SYNGAP1-227ENST00000638142 FAM181BA6NEQ2 426 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 452.1 ms