RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 PSG4Q00888 419 aa16.36■□□□□ 0.21
CACNA1A-257ENST00000638009 LTBP4Q8N2S1 1624 aa16.36■□□□□ 0.21
CACNA1A-257ENST00000638009 FAM90A9PA6NNJ1 464 aa16.36■□□□□ 0.21
CACNA1A-257ENST00000638009 CT62P0C5K7 136 aa16.36■□□□□ 0.21
CACNA1A-257ENST00000638009 NOTCH4Q99466 2003 aa16.36■□□□□ 0.21
CACNA1A-257ENST00000638009 A8MXK9 166 aa16.35■□□□□ 0.21
CACNA1A-257ENST00000638009 GPR179Q6PRD1 2367 aa16.35■□□□□ 0.21
CACNA1A-257ENST00000638009 PCNX3Q9H6A9 2034 aa16.35■□□□□ 0.21
CACNA1A-257ENST00000638009 FBXL7Q9UJT9 491 aa16.35■□□□□ 0.21
CACNA1A-257ENST00000638009 FDCSPQ8NFU4 85 aa16.35■□□□□ 0.21
CACNA1A-257ENST00000638009 GP6Q9HCN6 339 aa16.35■□□□□ 0.21
CACNA1A-257ENST00000638009 CCL3P10147 92 aa16.35■□□□□ 0.21
CACNA1A-257ENST00000638009 C1QL4Q86Z23 238 aa16.35■□□□□ 0.21
CACNA1A-257ENST00000638009 C2CD4DB7Z1M9 353 aa16.35■□□□□ 0.21
CACNA1A-257ENST00000638009 ATG2AQ2TAZ0 1938 aa16.35■□□□□ 0.21
CACNA1A-257ENST00000638009 ZNF721Q8TF20 911 aa16.35■□□□□ 0.21
CACNA1A-257ENST00000638009 IL18BPO95998 194 aa16.34■□□□□ 0.21
CACNA1A-257ENST00000638009 BHLHA9Q7RTU4 235 aa16.34■□□□□ 0.21
CACNA1A-257ENST00000638009 TMEM240Q5SV17 173 aa16.34■□□□□ 0.21
CACNA1A-257ENST00000638009 ASPHD2Q6ICH7 369 aa16.34■□□□□ 0.21
CACNA1A-257ENST00000638009 IGHV5-10-1A0A0J9YXX1 117 aa16.34■□□□□ 0.21
CACNA1A-257ENST00000638009 ZIC1Q15915 447 aa16.34■□□□□ 0.21
CACNA1A-257ENST00000638009 C15orf61A6NNL5 157 aa16.34■□□□□ 0.21
CACNA1A-257ENST00000638009 UMODP07911 640 aa16.34■□□□□ 0.21
CACNA1A-257ENST00000638009 HTN3P15516 51 aa16.33■□□□□ 0.21
CACNA1A-257ENST00000638009 SS18Q15532 418 aa16.33■□□□□ 0.21
CACNA1A-257ENST00000638009 C6orf226Q5I0X4 101 aa16.33■□□□□ 0.21
CACNA1A-257ENST00000638009 C1QTNF4Q9BXJ3 329 aa16.33■□□□□ 0.21
CACNA1A-257ENST00000638009 BCL6BQ8N143 479 aaPredicted RBP16.33■□□□□ 0.2
CACNA1A-257ENST00000638009 NEU4Q8WWR8 484 aaPredicted RBP16.33■□□□□ 0.2
CACNA1A-257ENST00000638009 OVOL1O14753 267 aa16.33■□□□□ 0.2
CACNA1A-257ENST00000638009 NCR2O95944 276 aa16.33■□□□□ 0.2
CACNA1A-257ENST00000638009 CCL1P22362 96 aa16.33■□□□□ 0.2
CACNA1A-257ENST00000638009 TSKUQ8WUA8 353 aa16.33■□□□□ 0.2
CACNA1A-257ENST00000638009 TMEM126AQ9H061 195 aa16.33■□□□□ 0.2
CACNA1A-257ENST00000638009 NANOS3P60323 173 aaKnown RBP16.33■□□□□ 0.2
CACNA1A-257ENST00000638009 LY6EQ16553 131 aa16.33■□□□□ 0.2
CACNA1A-257ENST00000638009 RPRMLQ8N4K4 120 aa16.32■□□□□ 0.2
CACNA1A-257ENST00000638009 KLF14Q8TD94 323 aaPredicted RBP16.32■□□□□ 0.2
CACNA1A-257ENST00000638009 C1QL3Q5VWW1 255 aa16.32■□□□□ 0.2
CACNA1A-257ENST00000638009 A0A1W2PRE2 83 aa16.32■□□□□ 0.2
CACNA1A-257ENST00000638009 VCYO14598 125 aa16.32■□□□□ 0.2
CACNA1A-257ENST00000638009 PEAR1Q5VY43 1037 aaPredicted RBP16.32■□□□□ 0.2
CACNA1A-257ENST00000638009 ATXN7O15265 892 aaPredicted RBP16.31■□□□□ 0.2
CACNA1A-257ENST00000638009 HIST1H2BKO60814 126 aa16.31■□□□□ 0.2
CACNA1A-257ENST00000638009 HIST1H2BJP06899 126 aa16.31■□□□□ 0.2
CACNA1A-257ENST00000638009 HIST1H2BOP23527 126 aa16.31■□□□□ 0.2
CACNA1A-257ENST00000638009 HIST1H2BBP33778 126 aa16.31■□□□□ 0.2
CACNA1A-257ENST00000638009 ADMP35318 185 aa16.31■□□□□ 0.2
CACNA1A-257ENST00000638009 VDAC2P45880 294 aaPredicted RBP16.31■□□□□ 0.2
CACNA1A-257ENST00000638009 HIST1H2BDP58876 126 aa16.31■□□□□ 0.2
CACNA1A-257ENST00000638009 HIST1H2BCP62807 126 aa16.31■□□□□ 0.2
CACNA1A-257ENST00000638009 HIST2H2BEQ16778 126 aa16.31■□□□□ 0.2
CACNA1A-257ENST00000638009 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.31■□□□□ 0.2
CACNA1A-257ENST00000638009 HIST1H2BHQ93079 126 aa16.31■□□□□ 0.2
CACNA1A-257ENST00000638009 HIST1H2BNQ99877 126 aa16.31■□□□□ 0.2
CACNA1A-257ENST00000638009 HIST1H2BMQ99879 126 aa16.31■□□□□ 0.2
CACNA1A-257ENST00000638009 A0A1B0GTL3 188 aa16.31■□□□□ 0.2
CACNA1A-257ENST00000638009 IGHMP01871 453 aa16.31■□□□□ 0.2
CACNA1A-257ENST00000638009 SRP19P09132 144 aaKnown RBP16.31■□□□□ 0.2
CACNA1A-257ENST00000638009 RPL36AP83881 106 aaKnown RBP16.31■□□□□ 0.2
CACNA1A-257ENST00000638009 RPL36ALQ969Q0 106 aaKnown RBP16.31■□□□□ 0.2
CACNA1A-257ENST00000638009 DUSP15Q9H1R2 295 aaPredicted RBP16.31■□□□□ 0.2
CACNA1A-257ENST00000638009 KIF26AQ9ULI4 1882 aaPredicted RBP16.31■□□□□ 0.2
CACNA1A-257ENST00000638009 F8W1H4 67 aa16.31■□□□□ 0.2
CACNA1A-257ENST00000638009 FAM166AQ6J272 317 aa16.31■□□□□ 0.2
CACNA1A-257ENST00000638009 CFHR5Q9BXR6 569 aa16.31■□□□□ 0.2
CACNA1A-257ENST00000638009 IGHG3P01860 377 aa16.31■□□□□ 0.2
CACNA1A-257ENST00000638009 TMEM144Q7Z5S9 345 aa16.31■□□□□ 0.2
CACNA1A-257ENST00000638009 OR13A1Q8NGR1 328 aa16.31■□□□□ 0.2
CACNA1A-257ENST00000638009 YBX2Q9Y2T7 364 aaKnown RBP16.31■□□□□ 0.2
CACNA1A-257ENST00000638009 LRP5O75197 1615 aa16.3■□□□□ 0.2
CACNA1A-257ENST00000638009 APOBEC3AP31941 199 aaPredicted RBP16.3■□□□□ 0.2
CACNA1A-257ENST00000638009 SIGLEC14Q08ET2 396 aa16.3■□□□□ 0.2
CACNA1A-257ENST00000638009 FGF11Q92914 225 aa16.3■□□□□ 0.2
CACNA1A-257ENST00000638009 ERVH48-1M5A8F1 160 aa16.3■□□□□ 0.2
CACNA1A-257ENST00000638009 DRD3P35462 400 aa16.3■□□□□ 0.2
CACNA1A-257ENST00000638009 VN1R4Q7Z5H5 301 aa16.3■□□□□ 0.2
CACNA1A-257ENST00000638009 TPRX1Q8N7U7 411 aa16.3■□□□□ 0.2
CACNA1A-257ENST00000638009 RNASE7Q9H1E1 156 aaKnown RBP16.3■□□□□ 0.2
CACNA1A-257ENST00000638009 GLRXP35754 106 aa16.29■□□□□ 0.2
CACNA1A-257ENST00000638009 MMP23AO75900 390 aa16.29■□□□□ 0.2
CACNA1A-257ENST00000638009 RBM3P98179 157 aaKnown RBP16.29■□□□□ 0.2
CACNA1A-257ENST00000638009 RPUSD1Q9UJJ7 312 aaKnown RBP16.29■□□□□ 0.2
CACNA1A-257ENST00000638009 NLRC5Q86WI3 1866 aa16.29■□□□□ 0.2
CACNA1A-257ENST00000638009 C9orf40Q8IXQ3 194 aa16.29■□□□□ 0.2
CACNA1A-257ENST00000638009 IGKV1D-33P01593 117 aa16.29■□□□□ 0.2
CACNA1A-257ENST00000638009 IGKV1-33P01594 117 aa16.29■□□□□ 0.2
CACNA1A-257ENST00000638009 TIMM21Q9BVV7 248 aa16.29■□□□□ 0.2
CACNA1A-257ENST00000638009 C1orf43Q9BWL3 253 aa16.29■□□□□ 0.2
CACNA1A-257ENST00000638009 ZNF708P17019 499 aa16.28■□□□□ 0.2
CACNA1A-257ENST00000638009 BOD1L2Q8IYS8 172 aa16.28■□□□□ 0.2
CACNA1A-257ENST00000638009 TANC1Q9C0D5 1861 aa16.28■□□□□ 0.2
CACNA1A-257ENST00000638009 TCRBV4S1A1TA0A5B7 111 aa16.28■□□□□ 0.2
CACNA1A-257ENST00000638009 SHANK3Q9BYB0 1731 aa16.28■□□□□ 0.2
CACNA1A-257ENST00000638009 TRAV8-3A0A0A6YYJ7 113 aa16.28■□□□□ 0.2
CACNA1A-257ENST00000638009 IGHV1OR15-9A0A0B4J2B8 117 aa16.28■□□□□ 0.2
CACNA1A-257ENST00000638009 UPK3AO75631 287 aa16.28■□□□□ 0.2
CACNA1A-257ENST00000638009 WFDC6Q9BQY6 131 aa16.28■□□□□ 0.2
CACNA1A-257ENST00000638009 SLC25A39Q9BZJ4 359 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms