RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 SCGB1C2P0DMR2 95 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 CXCL2P19875 107 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 LINC00474Q9P2X8 69 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 ING1Q9UK53 422 aaPredicted RBP2.74□□□□□ -1.97
LPP-220ENST00000617246 TOXO94900 526 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 HRH1P35367 487 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 CD300CQ08708 224 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 H3F3CQ6NXT2 135 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 BAGE3Q86Y29 109 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 BAGE2Q86Y30 109 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 ZNF503Q96F45 646 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 C20orf144Q9BQM9 153 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 MLST8Q9BVC4 326 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 TMEM126AQ9H061 195 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 IGKV1OR2-108A0A075B7D4 117 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 FAM236DA0A1B0GTK5 79 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 UMAD1C9J7I0 102 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 GREM1O60565 184 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 FAM236CP0DP71 79 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 TMUB2Q71RG4 321 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 IGHV1-3A0A0C4DH29 117 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 PPP5D1E7EU14 171 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 ANAPC16Q96DE5 110 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 KCNE3Q9Y6H6 103 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 KIAA2026Q5HYC2 2103 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 DEFB131BA0A096LNP1 70 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 C9JQL5 133 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 PPYP01298 95 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 SLC25A47Q6Q0C1 308 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 JPT2Q9H910 190 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 PDE6DO43924 150 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 FABP9Q0Z7S8 132 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 TMEM229BQ8NBD8 167 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 PSG5Q15238 335 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 TCEAL7Q9BRU2 100 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 G3V3Q6 166 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 BAK1Q16611 211 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 CTF1Q16619 201 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 ZNF826PQ6ZT77 177 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 GTF2H5Q6ZYL4 71 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 Q9HAA7 133 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 RNF125Q96EQ8 232 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 LINC00477Q96M19 166 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 PAX4O43316 350 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 RAMP1O60894 148 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 NDUFA7O95182 113 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 IGHA1P01876 353 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 IGHA2P01877 340 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 LINC00303Q3SY05 128 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 CBLN3Q6UW01 205 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 LHFPL4Q7Z7J7 247 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 YPEL1O60688 119 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 MT-ND6P03923 174 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 YPEL2Q96QA6 119 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 CD55P08174 381 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 IGLV3-32A0A0A0MS00 114 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 B4DEV8 164 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 IGHV3-23P01764 117 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 IGFBP3P17936 291 aaPredicted RBP2.73□□□□□ -1.97
LPP-220ENST00000617246 C9orf153Q5TBE3 101 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 RBFOX1Q9NWB1 397 aaKnown RBP2.73□□□□□ -1.97
LPP-220ENST00000617246 IBA57Q5T440 356 aaKnown RBP2.73□□□□□ -1.97
LPP-220ENST00000617246 TPRX1Q8N7U7 411 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 OR5A1Q8NGJ0 315 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 SPACA5Q96QH8 159 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 TRAV8-7A0A075B6U6 113 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 TRAV8-3A0A0A6YYJ7 113 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 G3V2L1 256 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 GYPEP15421 78 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 RPL12P30050 165 aaKnown RBP2.73□□□□□ -1.97
LPP-220ENST00000617246 DEFB131AP59861 70 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 FAAP24Q9BTP7 215 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 GALP22466 123 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 ETV1P50549 477 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 HSPE1P61604 102 aaKnown RBP2.73□□□□□ -1.97
LPP-220ENST00000617246 PLAC9Q5JTB6 97 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 ZDHHC24Q6UX98 284 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 SMIM2Q9BVW6 85 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 TRGC2P03986 189 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 HOXB4P17483 251 aaPredicted RBP2.73□□□□□ -1.97
LPP-220ENST00000617246 RNASE4P34096 147 aaKnown RBP2.73□□□□□ -1.97
LPP-220ENST00000617246 ADMP35318 185 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 LINC00322Q6ZN03 302 aaPredicted RBP2.73□□□□□ -1.97
LPP-220ENST00000617246 TMEM91Q6ZNR0 172 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 FOXI2Q6ZQN5 318 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 A0A1W2PPE3 182 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 LYRM9A8MSI8 78 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 C17orf82Q86X59 251 aaPredicted RBP2.73□□□□□ -1.97
LPP-220ENST00000617246 FAM19A2Q8N3H0 131 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 TECTAO75443 2155 aa2.73□□□□□ -1.97
LPP-220ENST00000617246 NUP214P35658 2090 aaPredicted RBP2.73□□□□□ -1.97
LPP-220ENST00000617246 ATP6V0E1O15342 81 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 HCP5Q6MZN7 132 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 DEPPQ9NTK1 212 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 JUNBP17275 347 aaPredicted RBP2.72□□□□□ -1.97
LPP-220ENST00000617246 DEFB135Q30KP9 77 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 IGHV4-39P01824 125 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 CKS2P33552 79 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 FOXA1P55317 472 aa2.72□□□□□ -1.97
LPP-220ENST00000617246 WFDC11Q8NEX6 87 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms