RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 NPY1RP25929 384 aa12.89□□□□□ -0.35
SMN2-213ENST00000614240 DHODHQ02127 395 aa12.89□□□□□ -0.35
SMN2-213ENST00000614240 BSXQ3C1V8 233 aa12.89□□□□□ -0.35
SMN2-213ENST00000614240 C16orf54Q6UWD8 224 aa12.89□□□□□ -0.35
SMN2-213ENST00000614240 Q6ZRM9 215 aa12.89□□□□□ -0.35
SMN2-213ENST00000614240 CSNK1G2-AS1Q8NCQ2 148 aa12.89□□□□□ -0.35
SMN2-213ENST00000614240 MARCH1Q8TCQ1 289 aa12.89□□□□□ -0.35
SMN2-213ENST00000614240 AP3S1Q92572 193 aa12.89□□□□□ -0.35
SMN2-213ENST00000614240 XCL2Q9UBD3 114 aa12.89□□□□□ -0.35
SMN2-213ENST00000614240 EXTL2Q9UBQ6 330 aa12.89□□□□□ -0.35
SMN2-213ENST00000614240 MTFP1Q9UDX5 166 aa12.89□□□□□ -0.35
SMN2-213ENST00000614240 CELA1Q9UNI1 258 aa12.89□□□□□ -0.35
SMN2-213ENST00000614240 U3KQE9 123 aa12.89□□□□□ -0.35
SMN2-213ENST00000614240 AGRNO00468 2067 aa12.89□□□□□ -0.35
SMN2-213ENST00000614240 RAB3DO95716 219 aa12.88□□□□□ -0.35
SMN2-213ENST00000614240 IGLC1P0CG04 106 aa12.88□□□□□ -0.35
SMN2-213ENST00000614240 YPEL3P61236 119 aaPredicted RBP12.88□□□□□ -0.35
SMN2-213ENST00000614240 C12orf74Q32Q52 190 aa12.88□□□□□ -0.35
SMN2-213ENST00000614240 ETFRF1Q6IPR1 90 aa12.88□□□□□ -0.35
SMN2-213ENST00000614240 PRSS54Q6PEW0 395 aa12.88□□□□□ -0.35
SMN2-213ENST00000614240 OR4D10Q8NGI6 311 aa12.88□□□□□ -0.35
SMN2-213ENST00000614240 OR52E5Q8NH55 327 aa12.88□□□□□ -0.35
SMN2-213ENST00000614240 RNASEH2CQ8TDP1 164 aaKnown RBP12.88□□□□□ -0.35
SMN2-213ENST00000614240 GLMPQ8WWB7 406 aa12.88□□□□□ -0.35
SMN2-213ENST00000614240 NDUFAF3Q9BU61 184 aa12.88□□□□□ -0.35
SMN2-213ENST00000614240 C14orf166Q9Y224 244 aaKnown RBP12.88□□□□□ -0.35
SMN2-213ENST00000614240 FAM90A26D6RGX4 464 aa12.87□□□□□ -0.35
SMN2-213ENST00000614240 IL4P05112 153 aa12.87□□□□□ -0.35
SMN2-213ENST00000614240 OR5AC1P0C628 307 aa12.87□□□□□ -0.35
SMN2-213ENST00000614240 P0DMU3 169 aa12.87□□□□□ -0.35
SMN2-213ENST00000614240 FAM231AP0DMU4 169 aa12.87□□□□□ -0.35
SMN2-213ENST00000614240 FAM231CP0DMU5 169 aa12.87□□□□□ -0.35
SMN2-213ENST00000614240 TAS2R19P59542 299 aa12.87□□□□□ -0.35
SMN2-213ENST00000614240 C2orf83Q53S99 150 aa12.87□□□□□ -0.35
SMN2-213ENST00000614240 SLC24A4Q8NFF2 622 aa12.87□□□□□ -0.35
SMN2-213ENST00000614240 C15orf40Q8WUR7 153 aa12.87□□□□□ -0.35
SMN2-213ENST00000614240 TMEM222Q9H0R3 208 aa12.87□□□□□ -0.35
SMN2-213ENST00000614240 NRN1Q9NPD7 142 aa12.87□□□□□ -0.35
SMN2-213ENST00000614240 CACNG5Q9UF02 275 aa12.87□□□□□ -0.35
SMN2-213ENST00000614240 GSTZ1O43708 216 aaPredicted RBP12.86□□□□□ -0.35
SMN2-213ENST00000614240 CDS2O95674 445 aa12.86□□□□□ -0.35
SMN2-213ENST00000614240 AMBPP02760 352 aa12.86□□□□□ -0.35
SMN2-213ENST00000614240 RD3LP0DJH9 198 aa12.86□□□□□ -0.35
SMN2-213ENST00000614240 POM121L12Q8N7R1 296 aa12.86□□□□□ -0.35
SMN2-213ENST00000614240 TMEM229BQ8NBD8 167 aa12.86□□□□□ -0.35
SMN2-213ENST00000614240 NPIPB3Q92617 1050 aa12.86□□□□□ -0.35
SMN2-213ENST00000614240 RBPMSQ93062 196 aaKnown RBP12.86□□□□□ -0.35
SMN2-213ENST00000614240 ACY3Q96HD9 319 aa12.86□□□□□ -0.35
SMN2-213ENST00000614240 H3BMM0 161 aa12.85□□□□□ -0.35
SMN2-213ENST00000614240 CD74P04233 296 aa12.85□□□□□ -0.35
SMN2-213ENST00000614240 USF2Q15853 346 aaPredicted RBP12.85□□□□□ -0.35
SMN2-213ENST00000614240 STEAP1BQ6NZ63 245 aa12.85□□□□□ -0.35
SMN2-213ENST00000614240 SIGLEC15Q6ZMC9 328 aa12.85□□□□□ -0.35
SMN2-213ENST00000614240 NOXA1Q86UR1 476 aa12.85□□□□□ -0.35
SMN2-213ENST00000614240 GPR146Q96CH1 333 aa12.85□□□□□ -0.35
SMN2-213ENST00000614240 ABHD1Q96SE0 405 aa12.85□□□□□ -0.35
SMN2-213ENST00000614240 FRAS1Q86XX4 4008 aa12.85□□□□□ -0.35
SMN2-213ENST00000614240 M0R2N4 97 aa12.84□□□□□ -0.35
SMN2-213ENST00000614240 NXPH3O95157 252 aa12.84□□□□□ -0.35
SMN2-213ENST00000614240 ZNF182P17025 639 aaPredicted RBP12.84□□□□□ -0.35
SMN2-213ENST00000614240 EMP1P54849 157 aa12.84□□□□□ -0.35
SMN2-213ENST00000614240 AARDQ4LEZ3 155 aa12.84□□□□□ -0.35
SMN2-213ENST00000614240 TMEM268Q5VZI3 342 aa12.84□□□□□ -0.35
SMN2-213ENST00000614240 SELENOHQ8IZQ5 122 aaKnown RBP12.84□□□□□ -0.35
SMN2-213ENST00000614240 GLYATL2Q8WU03 294 aa12.84□□□□□ -0.35
SMN2-213ENST00000614240 NAA60Q9H7X0 242 aa12.84□□□□□ -0.35
SMN2-213ENST00000614240 SEPSECSQ9HD40 501 aaKnown RBP12.84□□□□□ -0.35
SMN2-213ENST00000614240 KMT2AQ03164 3969 aa12.84□□□□□ -0.35
SMN2-213ENST00000614240 TOMM40O96008 361 aa12.83□□□□□ -0.36
SMN2-213ENST00000614240 IFNA10P01566 189 aa12.83□□□□□ -0.36
SMN2-213ENST00000614240 SPART-AS1P0CW21 52 aa12.83□□□□□ -0.36
SMN2-213ENST00000614240 MEF2DQ14814 521 aa12.83□□□□□ -0.36
SMN2-213ENST00000614240 LHFPL5Q8TAF8 219 aa12.83□□□□□ -0.36
SMN2-213ENST00000614240 PFDN2Q9UHV9 154 aa12.83□□□□□ -0.36
SMN2-213ENST00000614240 IGHV3OR16-12A0A075B7B8 117 aa12.82□□□□□ -0.36
SMN2-213ENST00000614240 PRSS29PA6NIE9 313 aa12.82□□□□□ -0.36
SMN2-213ENST00000614240 DISC1C4P0D8 188 aa12.82□□□□□ -0.36
SMN2-213ENST00000614240 BUB3O43684 328 aa12.82□□□□□ -0.36
SMN2-213ENST00000614240 IGKV3-20P01619 116 aa12.82□□□□□ -0.36
SMN2-213ENST00000614240 HLA-DRB4P13762 266 aa12.82□□□□□ -0.36
SMN2-213ENST00000614240 GPR107Q5VW38 600 aa12.82□□□□□ -0.36
SMN2-213ENST00000614240 FAAP20Q6NZ36 180 aa12.82□□□□□ -0.36
SMN2-213ENST00000614240 OR51G1Q8NGK1 321 aa12.82□□□□□ -0.36
SMN2-213ENST00000614240 LINC00052Q96N35 136 aa12.82□□□□□ -0.36
SMN2-213ENST00000614240 RTBDNQ9BSG5 229 aaPredicted RBP12.82□□□□□ -0.36
SMN2-213ENST00000614240 PBDC1Q9BVG4 233 aa12.82□□□□□ -0.36
SMN2-213ENST00000614240 SCRT1Q9BWW7 348 aa12.82□□□□□ -0.36
SMN2-213ENST00000614240 CACFD1Q9UGQ2 172 aa12.82□□□□□ -0.36
SMN2-213ENST00000614240 HLA-DRB4X5D2U9 266 aa12.82□□□□□ -0.36
SMN2-213ENST00000614240 TMEM189A5PLL7 270 aa12.81□□□□□ -0.36
SMN2-213ENST00000614240 GABARAPH6UMI1 98 aa12.81□□□□□ -0.36
SMN2-213ENST00000614240 GABARAPO95166 117 aa12.81□□□□□ -0.36
SMN2-213ENST00000614240 IFNA21P01568 189 aa12.81□□□□□ -0.36
SMN2-213ENST00000614240 PSG1P11464 419 aa12.81□□□□□ -0.36
SMN2-213ENST00000614240 NUP62P37198 522 aaPredicted RBP12.81□□□□□ -0.36
SMN2-213ENST00000614240 NKX2-1P43699 371 aaPredicted RBP12.81□□□□□ -0.36
SMN2-213ENST00000614240 FXYD7P58549 80 aa12.81□□□□□ -0.36
SMN2-213ENST00000614240 SURF2Q15527 256 aaPredicted RBP12.81□□□□□ -0.36
SMN2-213ENST00000614240 UBE2DNLQ8IWF7 75 aa12.81□□□□□ -0.36
SMN2-213ENST00000614240 SMIM9A6NGZ8 99 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms