RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 SYS1-DBNDD2H3BUS1 97 aa12.07□□□□□ -0.48
VPS36-207ENST00000611132 RIPPLY3P57055 190 aa12.07□□□□□ -0.48
VPS36-207ENST00000611132 TRIP6Q15654 476 aaKnown RBP12.07□□□□□ -0.48
VPS36-207ENST00000611132 CENPVQ7Z7K6 275 aaPredicted RBP12.07□□□□□ -0.48
VPS36-207ENST00000611132 Q8NFD4 153 aa12.07□□□□□ -0.48
VPS36-207ENST00000611132 C18orf32Q8TCD1 76 aa12.07□□□□□ -0.48
VPS36-207ENST00000611132 NCOR1O75376 2440 aa12.07□□□□□ -0.48
VPS36-207ENST00000611132 SCRT1Q9BWW7 348 aa12.07□□□□□ -0.48
VPS36-207ENST00000611132 DOCK10Q96BY6 2186 aa12.07□□□□□ -0.48
VPS36-207ENST00000611132 C19orf67A6NJJ6 358 aa12.07□□□□□ -0.48
VPS36-207ENST00000611132 GOSR1O95249 250 aa12.07□□□□□ -0.48
VPS36-207ENST00000611132 IL4P05112 153 aa12.07□□□□□ -0.48
VPS36-207ENST00000611132 ATP1A1-AS1Q5TC04 95 aa12.07□□□□□ -0.48
VPS36-207ENST00000611132 OR10W1Q8NGF6 305 aa12.07□□□□□ -0.48
VPS36-207ENST00000611132 OR4X2Q8NGF9 303 aa12.07□□□□□ -0.48
VPS36-207ENST00000611132 TMUB1Q9BVT8 246 aa12.07□□□□□ -0.48
VPS36-207ENST00000611132 H3BVH4 76 aa12.06□□□□□ -0.48
VPS36-207ENST00000611132 CIARTQ8N365 385 aaPredicted RBP12.06□□□□□ -0.48
VPS36-207ENST00000611132 MMP23AO75900 390 aa12.06□□□□□ -0.48
VPS36-207ENST00000611132 PSG9Q00887 426 aa12.06□□□□□ -0.48
VPS36-207ENST00000611132 ZFP36L1Q07352 338 aaKnown RBP12.06□□□□□ -0.48
VPS36-207ENST00000611132 TPTE2P1Q5T6R2 138 aa12.06□□□□□ -0.48
VPS36-207ENST00000611132 OTORQ9NRC9 128 aa12.06□□□□□ -0.48
VPS36-207ENST00000611132 SRRM5B3KS81 715 aa12.06□□□□□ -0.48
VPS36-207ENST00000611132 RPL13AP40429 203 aaKnown RBP12.06□□□□□ -0.48
VPS36-207ENST00000611132 Q6ZSR3 168 aa12.06□□□□□ -0.48
VPS36-207ENST00000611132 STPG4Q8N801 248 aa12.06□□□□□ -0.48
VPS36-207ENST00000611132 TEX45Q8NA69 505 aa12.06□□□□□ -0.48
VPS36-207ENST00000611132 RALYQ9UKM9 306 aaKnown RBP12.06□□□□□ -0.48
VPS36-207ENST00000611132 V9GYV3 84 aa12.06□□□□□ -0.48
VPS36-207ENST00000611132 PSG1P11464 419 aa12.06□□□□□ -0.48
VPS36-207ENST00000611132 PRR31Q5SQ13 230 aa12.06□□□□□ -0.48
VPS36-207ENST00000611132 CHD3Q12873 2000 aaKnown RBP12.05□□□□□ -0.48
VPS36-207ENST00000611132 TRAV8-6A0A0B4J262 113 aa12.05□□□□□ -0.48
VPS36-207ENST00000611132 SAMD13Q5VXD3 122 aa12.05□□□□□ -0.48
VPS36-207ENST00000611132 ZNF502Q8TBZ5 544 aa12.05□□□□□ -0.48
VPS36-207ENST00000611132 INTS1Q8N201 2190 aaKnown RBP12.05□□□□□ -0.48
VPS36-207ENST00000611132 A0A087X0K7 114 aa12.05□□□□□ -0.48
VPS36-207ENST00000611132 ITGB1BP1O14713 200 aa12.05□□□□□ -0.48
VPS36-207ENST00000611132 MFAP4P55083 255 aa12.05□□□□□ -0.48
VPS36-207ENST00000611132 OR5A1Q8NGJ0 315 aa12.05□□□□□ -0.48
VPS36-207ENST00000611132 LINC00312Q9Y6C7 94 aa12.05□□□□□ -0.48
VPS36-207ENST00000611132 MUC21A0A0G2JKD1 596 aa12.05□□□□□ -0.48
VPS36-207ENST00000611132 MUC21A0A140T8X8 626 aa12.05□□□□□ -0.48
VPS36-207ENST00000611132 NKX2-8O15522 239 aa12.05□□□□□ -0.48
VPS36-207ENST00000611132 MUC21Q5SSG8 566 aa12.05□□□□□ -0.48
VPS36-207ENST00000611132 TTC9CQ8N5M4 171 aa12.05□□□□□ -0.48
VPS36-207ENST00000611132 CD3EP07766 207 aa12.04□□□□□ -0.48
VPS36-207ENST00000611132 CD177Q8N6Q3 437 aa12.04□□□□□ -0.48
VPS36-207ENST00000611132 C1RLQ9NZP8 487 aa12.04□□□□□ -0.48
VPS36-207ENST00000611132 USF3Q68DE3 2245 aa12.04□□□□□ -0.48
VPS36-207ENST00000611132 TIMM23BQ5SRD1 257 aa12.04□□□□□ -0.48
VPS36-207ENST00000611132 NEUROG1Q92886 237 aa12.04□□□□□ -0.48
VPS36-207ENST00000611132 TMEM160Q9NX00 188 aa12.04□□□□□ -0.48
VPS36-207ENST00000611132 SPTBN1Q01082 2364 aaKnown RBP12.04□□□□□ -0.48
VPS36-207ENST00000611132 J3KRW8 73 aa12.04□□□□□ -0.48
VPS36-207ENST00000611132 CACNG7P62955 275 aa12.04□□□□□ -0.48
VPS36-207ENST00000611132 HSD52Q0P140 79 aa12.04□□□□□ -0.48
VPS36-207ENST00000611132 TMEM78Q5T7P6 136 aa12.04□□□□□ -0.48
VPS36-207ENST00000611132 C1orf185Q5T7R7 199 aa12.04□□□□□ -0.48
VPS36-207ENST00000611132 WFDC3Q8IUB2 231 aa12.04□□□□□ -0.48
VPS36-207ENST00000611132 RAB1BQ9H0U4 201 aa12.04□□□□□ -0.48
VPS36-207ENST00000611132 PROK2Q9HC23 129 aa12.04□□□□□ -0.48
VPS36-207ENST00000611132 KIF26AQ9ULI4 1882 aaPredicted RBP12.04□□□□□ -0.48
VPS36-207ENST00000611132 APC2O95996 2303 aa12.04□□□□□ -0.48
VPS36-207ENST00000611132 GAGE12BA1L429 117 aa12.04□□□□□ -0.48
VPS36-207ENST00000611132 FNDC10F2Z333 226 aa12.04□□□□□ -0.48
VPS36-207ENST00000611132 CD5LO43866 347 aa12.04□□□□□ -0.48
VPS36-207ENST00000611132 SS18L1O75177 396 aaPredicted RBP12.04□□□□□ -0.48
VPS36-207ENST00000611132 MGPP08493 103 aa12.04□□□□□ -0.48
VPS36-207ENST00000611132 MYOD1P15172 320 aa12.04□□□□□ -0.48
VPS36-207ENST00000611132 OR5AN1Q8NGI8 311 aa12.04□□□□□ -0.48
VPS36-207ENST00000611132 LINC00479Q96M42 142 aa12.04□□□□□ -0.48
VPS36-207ENST00000611132 AKAP6Q13023 2319 aa12.03□□□□□ -0.48
VPS36-207ENST00000611132 KIAA1549LQ6ZVL6 1849 aa12.03□□□□□ -0.48
VPS36-207ENST00000611132 NUPR1O60356 82 aa12.03□□□□□ -0.48
VPS36-207ENST00000611132 HBDP02042 147 aa12.03□□□□□ -0.48
VPS36-207ENST00000611132 MEF2CQ06413 473 aaPredicted RBP12.03□□□□□ -0.48
VPS36-207ENST00000611132 PRSS8Q16651 343 aa12.03□□□□□ -0.48
VPS36-207ENST00000611132 OR11H12B2RN74 326 aa12.03□□□□□ -0.48
VPS36-207ENST00000611132 Q0VFX4 171 aa12.03□□□□□ -0.48
VPS36-207ENST00000611132 DEFB124Q8NES8 71 aa12.03□□□□□ -0.48
VPS36-207ENST00000611132 OR11H1Q8NG94 326 aa12.03□□□□□ -0.48
VPS36-207ENST00000611132 OR11H2Q8NH07 326 aa12.03□□□□□ -0.48
VPS36-207ENST00000611132 C11orf52Q96A22 123 aa12.03□□□□□ -0.48
VPS36-207ENST00000611132 TRBV20OR9-2A0A075B6H5 130 aa12.03□□□□□ -0.48
VPS36-207ENST00000611132 M0QZ24 198 aa12.03□□□□□ -0.48
VPS36-207ENST00000611132 TMEM249Q2WGJ8 235 aa12.03□□□□□ -0.48
VPS36-207ENST00000611132 C11orf1Q9H5F2 150 aa12.03□□□□□ -0.48
VPS36-207ENST00000611132 KLK10O43240 276 aa12.02□□□□□ -0.48
VPS36-207ENST00000611132 NTN3O00634 580 aaPredicted RBP12.02□□□□□ -0.49
VPS36-207ENST00000611132 F2Z2F3 143 aa12.02□□□□□ -0.49
VPS36-207ENST00000611132 CCL3L1P16619 93 aa12.02□□□□□ -0.49
VPS36-207ENST00000611132 VDAC2P45880 294 aaPredicted RBP12.02□□□□□ -0.49
VPS36-207ENST00000611132 SLC25A48Q6ZT89 311 aaKnown RBP12.02□□□□□ -0.49
VPS36-207ENST00000611132 OR9G4Q8NGQ1 327 aa12.02□□□□□ -0.49
VPS36-207ENST00000611132 CST9LQ9H4G1 147 aa12.02□□□□□ -0.49
VPS36-207ENST00000611132 DLX1P56177 255 aa12.01□□□□□ -0.49
VPS36-207ENST00000611132 OCIAD2Q56VL3 154 aa12.01□□□□□ -0.49
VPS36-207ENST00000611132 FAM53AQ6NSI3 398 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms