RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 CYSLTR1Q9Y271 337 aa8.08□□□□□ -1.12
CSMD1-217ENST00000602723 A0A1W2PRS3 328 aa8.07□□□□□ -1.12
CSMD1-217ENST00000602723 SRSF1Q07955 248 aaKnown RBP eCLIP8.07□□□□□ -1.12
CSMD1-217ENST00000602723 PPP1R27Q86WC6 154 aa8.07□□□□□ -1.12
CSMD1-217ENST00000602723 C18orf12Q96KH6 178 aa8.07□□□□□ -1.12
CSMD1-217ENST00000602723 IGKV3D-20A0A0C4DH25 116 aa8.07□□□□□ -1.12
CSMD1-217ENST00000602723 GAGE13Q4V321 117 aa8.07□□□□□ -1.12
CSMD1-217ENST00000602723 CTHRC1Q96CG8 243 aa8.07□□□□□ -1.12
CSMD1-217ENST00000602723 FBXL15Q9H469 300 aa8.07□□□□□ -1.12
CSMD1-217ENST00000602723 CD7P09564 240 aa8.07□□□□□ -1.12
CSMD1-217ENST00000602723 ZNF525Q8N782 197 aa8.07□□□□□ -1.12
CSMD1-217ENST00000602723 EGR4Q05215 589 aa8.07□□□□□ -1.12
CSMD1-217ENST00000602723 CFHR5Q9BXR6 569 aa8.07□□□□□ -1.12
CSMD1-217ENST00000602723 GNB1LQ9BYB4 327 aa8.07□□□□□ -1.12
CSMD1-217ENST00000602723 SRSF6Q13247 344 aaKnown RBP8.07□□□□□ -1.12
CSMD1-217ENST00000602723 STPG1Q5TH74 334 aa8.07□□□□□ -1.12
CSMD1-217ENST00000602723 TRGV2A0A075B6R0 118 aa8.07□□□□□ -1.12
CSMD1-217ENST00000602723 A8MWV9 139 aa8.07□□□□□ -1.12
CSMD1-217ENST00000602723 CHCHD1Q96BP2 118 aaKnown RBP8.07□□□□□ -1.12
CSMD1-217ENST00000602723 TRAV14DV4A0A0A6YYC5 116 aa8.07□□□□□ -1.12
CSMD1-217ENST00000602723 PPBPP02775 128 aa8.07□□□□□ -1.12
CSMD1-217ENST00000602723 BSPH1Q075Z2 132 aa8.07□□□□□ -1.12
CSMD1-217ENST00000602723 ORMDL2Q53FV1 153 aa8.07□□□□□ -1.12
CSMD1-217ENST00000602723 SAA2-SAA4A0A096LPE2 208 aa8.07□□□□□ -1.12
CSMD1-217ENST00000602723 SAA2P0DJI9 122 aaPredicted RBP8.07□□□□□ -1.12
CSMD1-217ENST00000602723 EVI2AP22794 236 aa8.07□□□□□ -1.12
CSMD1-217ENST00000602723 WDR90Q96KV7 1748 aa8.06□□□□□ -1.12
CSMD1-217ENST00000602723 CECR9P0C854 216 aa8.06□□□□□ -1.12
CSMD1-217ENST00000602723 DPM3Q9P2X0 92 aa8.06□□□□□ -1.12
CSMD1-217ENST00000602723 CCL20P78556 96 aa8.06□□□□□ -1.12
CSMD1-217ENST00000602723 MESP2Q0VG99 397 aa8.06□□□□□ -1.12
CSMD1-217ENST00000602723 PCOLCEQ15113 449 aa8.06□□□□□ -1.12
CSMD1-217ENST00000602723 TRAV2A0A0B4J234 112 aa8.06□□□□□ -1.12
CSMD1-217ENST00000602723 A0A0G2JK05 382 aa8.06□□□□□ -1.12
CSMD1-217ENST00000602723 SRSF3P84103 164 aaKnown RBP8.06□□□□□ -1.12
CSMD1-217ENST00000602723 TET2Q6N021 2002 aaPredicted RBP8.06□□□□□ -1.12
CSMD1-217ENST00000602723 GATA2P23769 480 aaPredicted RBP8.06□□□□□ -1.12
CSMD1-217ENST00000602723 GLRXP35754 106 aa8.06□□□□□ -1.12
CSMD1-217ENST00000602723 ORAOV1Q8WV07 137 aa8.06□□□□□ -1.12
CSMD1-217ENST00000602723 RNF222A6NCQ9 220 aa8.06□□□□□ -1.12
CSMD1-217ENST00000602723 HIST1H2BLQ99880 126 aa8.06□□□□□ -1.12
CSMD1-217ENST00000602723 HSD52Q0P140 79 aa8.06□□□□□ -1.12
CSMD1-217ENST00000602723 OR13A1Q8NGR1 328 aa8.06□□□□□ -1.12
CSMD1-217ENST00000602723 CTSBP07858 339 aa8.06□□□□□ -1.12
CSMD1-217ENST00000602723 EIF4EBP2Q13542 120 aaPredicted RBP8.06□□□□□ -1.12
CSMD1-217ENST00000602723 ATXN8Q156A1 80 aa8.06□□□□□ -1.12
CSMD1-217ENST00000602723 CLEC19AQ6UXS0 136 aa8.06□□□□□ -1.12
CSMD1-217ENST00000602723 CHTOPQ9Y3Y2 248 aaKnown RBP8.06□□□□□ -1.12
CSMD1-217ENST00000602723 KIAA1549LQ6ZVL6 1849 aa8.06□□□□□ -1.12
CSMD1-217ENST00000602723 C1QTNF9P0C862 333 aa8.05□□□□□ -1.12
CSMD1-217ENST00000602723 CD28P10747 220 aa8.05□□□□□ -1.12
CSMD1-217ENST00000602723 MS4A6AQ9H2W1 248 aa8.05□□□□□ -1.12
CSMD1-217ENST00000602723 TRAV8-1A0A0A6YYK1 113 aa8.05□□□□□ -1.12
CSMD1-217ENST00000602723 GFI1BQ5VTD9 330 aa8.05□□□□□ -1.12
CSMD1-217ENST00000602723 A0A1B0GTI1 187 aa8.05□□□□□ -1.12
CSMD1-217ENST00000602723 A6NNC1 897 aa8.05□□□□□ -1.12
CSMD1-217ENST00000602723 M0R2P5 195 aa8.05□□□□□ -1.12
CSMD1-217ENST00000602723 IGKCP01834 107 aa8.05□□□□□ -1.12
CSMD1-217ENST00000602723 C1QTNF5Q9BXJ0 243 aa8.05□□□□□ -1.12
CSMD1-217ENST00000602723 ERVK11-1P61568 191 aa8.05□□□□□ -1.12
CSMD1-217ENST00000602723 LAGE3Q14657 143 aa8.05□□□□□ -1.12
CSMD1-217ENST00000602723 RTN4RL2Q86UN3 420 aa8.05□□□□□ -1.12
CSMD1-217ENST00000602723 FAM90A1Q86YD7 464 aa8.05□□□□□ -1.12
CSMD1-217ENST00000602723 ZNF479Q96JC4 524 aa8.05□□□□□ -1.12
CSMD1-217ENST00000602723 GLMPQ8WWB7 406 aa8.05□□□□□ -1.12
CSMD1-217ENST00000602723 TNS1Q9HBL0 1735 aaKnown RBP8.05□□□□□ -1.12
CSMD1-217ENST00000602723 SHISA3A0PJX4 238 aa8.05□□□□□ -1.12
CSMD1-217ENST00000602723 LINC00312Q9Y6C7 94 aa8.05□□□□□ -1.12
CSMD1-217ENST00000602723 C15orf61A6NNL5 157 aa8.05□□□□□ -1.12
CSMD1-217ENST00000602723 HTN3P15516 51 aa8.05□□□□□ -1.12
CSMD1-217ENST00000602723 TMEM86BQ8N661 226 aa8.05□□□□□ -1.12
CSMD1-217ENST00000602723 OSTCQ9NRP0 149 aa8.05□□□□□ -1.12
CSMD1-217ENST00000602723 CHCHD2Q9Y6H1 151 aaPredicted RBP8.05□□□□□ -1.12
CSMD1-217ENST00000602723 TLN2Q9Y4G6 2542 aa8.04□□□□□ -1.12
CSMD1-217ENST00000602723 SMIM10L1P0DMW3 83 aa8.04□□□□□ -1.12
CSMD1-217ENST00000602723 SMIM10Q96HG1 83 aa8.04□□□□□ -1.12
CSMD1-217ENST00000602723 IGHV2OR16-5A0A0B4J2B6 119 aa8.04□□□□□ -1.12
CSMD1-217ENST00000602723 PRR19A6NJB7 356 aa8.04□□□□□ -1.12
CSMD1-217ENST00000602723 C1QL4Q86Z23 238 aa8.04□□□□□ -1.12
CSMD1-217ENST00000602723 TMEM167AQ8TBQ9 72 aa8.04□□□□□ -1.12
CSMD1-217ENST00000602723 IGLV3-21P80748 117 aaPredicted RBP8.04□□□□□ -1.12
CSMD1-217ENST00000602723 GAGE2BQ13066 116 aa8.04□□□□□ -1.12
CSMD1-217ENST00000602723 GAGE2EQ4V326 116 aa8.04□□□□□ -1.12
CSMD1-217ENST00000602723 GP6Q9HCN6 339 aa8.04□□□□□ -1.12
CSMD1-217ENST00000602723 GAGE2DQ9UEU5 116 aa8.04□□□□□ -1.12
CSMD1-217ENST00000602723 HEPN1Q6WQI6 88 aa8.04□□□□□ -1.12
CSMD1-217ENST00000602723 SAP25Q8TEE9 199 aa8.04□□□□□ -1.12
CSMD1-217ENST00000602723 RNF125Q96EQ8 232 aa8.04□□□□□ -1.12
CSMD1-217ENST00000602723 UMODP07911 640 aa8.04□□□□□ -1.12
CSMD1-217ENST00000602723 FAM216BQ8N7L0 139 aa8.04□□□□□ -1.12
CSMD1-217ENST00000602723 ZNF703Q9H7S9 590 aaPredicted RBP8.04□□□□□ -1.12
CSMD1-217ENST00000602723 FABP5P3A8MUU1 101 aa8.04□□□□□ -1.12
CSMD1-217ENST00000602723 CD55P08174 381 aa8.04□□□□□ -1.12
CSMD1-217ENST00000602723 ZNF124Q15973 351 aa8.04□□□□□ -1.12
CSMD1-217ENST00000602723 NRN1LQ496H8 165 aa8.04□□□□□ -1.12
CSMD1-217ENST00000602723 NR2C2APQ86WQ0 139 aa8.04□□□□□ -1.12
CSMD1-217ENST00000602723 LINC01560Q8TB33 94 aa8.04□□□□□ -1.12
CSMD1-217ENST00000602723 FOXD3Q9UJU5 478 aaPredicted RBP8.04□□□□□ -1.12
CSMD1-217ENST00000602723 EPDR1Q9UM22 224 aa8.04□□□□□ -1.12
CSMD1-217ENST00000602723 ADAMTS9Q9P2N4 1935 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms