RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 YIF1AO95070 293 aa14.07□□□□□ -0.16
VRK3-225ENST00000601912 HBE1P02100 147 aa14.07□□□□□ -0.16
VRK3-225ENST00000601912 FABP1P07148 127 aa14.07□□□□□ -0.16
VRK3-225ENST00000601912 LINC00869P0C866 280 aa14.07□□□□□ -0.16
VRK3-225ENST00000601912 ZNF90Q03938 601 aa14.07□□□□□ -0.16
VRK3-225ENST00000601912 C15orf32Q32M92 178 aa14.07□□□□□ -0.16
VRK3-225ENST00000601912 MS4A10Q96PG2 267 aa14.07□□□□□ -0.16
VRK3-225ENST00000601912 TXN2Q99757 166 aa14.07□□□□□ -0.16
VRK3-225ENST00000601912 HIVEP2P31629 2446 aa14.07□□□□□ -0.16
VRK3-225ENST00000601912 A0A1W2PPV4 95 aa14.07□□□□□ -0.16
VRK3-225ENST00000601912 GNG7O60262 68 aa14.07□□□□□ -0.16
VRK3-225ENST00000601912 BRI3O95415 125 aa14.07□□□□□ -0.16
VRK3-225ENST00000601912 IGLC1P0CG04 106 aa14.07□□□□□ -0.16
VRK3-225ENST00000601912 GATA2P23769 480 aaPredicted RBP14.07□□□□□ -0.16
VRK3-225ENST00000601912 PPIFP30405 207 aaKnown RBP14.07□□□□□ -0.16
VRK3-225ENST00000601912 Q56UQ5 140 aa14.07□□□□□ -0.16
VRK3-225ENST00000601912 FAM122CQ6P4D5 195 aa14.07□□□□□ -0.16
VRK3-225ENST00000601912 IL34Q6ZMJ4 242 aa14.07□□□□□ -0.16
VRK3-225ENST00000601912 MARC2Q969Z3 335 aa14.07□□□□□ -0.16
VRK3-225ENST00000601912 ZFHX3Q15911 3703 aa14.06□□□□□ -0.16
VRK3-225ENST00000601912 CTXND1A0A1B0GTU2 59 aa14.06□□□□□ -0.16
VRK3-225ENST00000601912 MFSD2BA6NFX1 497 aa14.06□□□□□ -0.16
VRK3-225ENST00000601912 DNAJC9-AS1A6NH13 148 aa14.06□□□□□ -0.16
VRK3-225ENST00000601912 FAM223BA6NKX1 122 aa14.06□□□□□ -0.16
VRK3-225ENST00000601912 CDC34P49427 236 aaPredicted RBP14.06□□□□□ -0.16
VRK3-225ENST00000601912 GCSAMLQ5JQS6 135 aa14.06□□□□□ -0.16
VRK3-225ENST00000601912 FAM223AQ8IWN6 122 aa14.06□□□□□ -0.16
VRK3-225ENST00000601912 ZNF418Q8TF45 676 aaPredicted RBP14.06□□□□□ -0.16
VRK3-225ENST00000601912 MBD3L1Q8WWY6 194 aa14.06□□□□□ -0.16
VRK3-225ENST00000601912 C19orf24Q9BVV8 132 aa14.06□□□□□ -0.16
VRK3-225ENST00000601912 S4R3C0 116 aa14.06□□□□□ -0.16
VRK3-225ENST00000601912 TRAV1-1A0A0B4J248 108 aa14.05□□□□□ -0.16
VRK3-225ENST00000601912 ATP6V1G1O75348 118 aa14.05□□□□□ -0.16
VRK3-225ENST00000601912 TRGV3P03979 118 aa14.05□□□□□ -0.16
VRK3-225ENST00000601912 ATP5G2Q06055 141 aa14.05□□□□□ -0.16
VRK3-225ENST00000601912 ZNF726P1Q15940 193 aa14.05□□□□□ -0.16
VRK3-225ENST00000601912 COMMD1Q8N668 190 aa14.05□□□□□ -0.16
VRK3-225ENST00000601912 EEF1AKMT3Q96AZ1 226 aa14.05□□□□□ -0.16
VRK3-225ENST00000601912 CITED4Q96RK1 184 aa14.05□□□□□ -0.16
VRK3-225ENST00000601912 GSX1Q9H4S2 264 aaPredicted RBP14.05□□□□□ -0.16
VRK3-225ENST00000601912 SLC25A22Q9H936 323 aa14.05□□□□□ -0.16
VRK3-225ENST00000601912 ZNF702PQ9H963 129 aa14.05□□□□□ -0.16
VRK3-225ENST00000601912 GAR1Q9NY12 217 aaKnown RBP14.05□□□□□ -0.16
VRK3-225ENST00000601912 SEC14L6B5MCN3 397 aa14.04□□□□□ -0.16
VRK3-225ENST00000601912 CLDN34H7C241 214 aa14.04□□□□□ -0.16
VRK3-225ENST00000601912 FCGR2BP31994 310 aaPredicted RBP14.04□□□□□ -0.16
VRK3-225ENST00000601912 RHOBP62745 196 aa14.04□□□□□ -0.16
VRK3-225ENST00000601912 DEFA5Q01523 94 aa14.04□□□□□ -0.16
VRK3-225ENST00000601912 LCN15Q6UWW0 184 aa14.04□□□□□ -0.16
VRK3-225ENST00000601912 RAB24Q969Q5 203 aa14.04□□□□□ -0.16
VRK3-225ENST00000601912 TRBV7-1A0A0A6YYK4 115 aa14.04□□□□□ -0.16
VRK3-225ENST00000601912 A0A1B0GV50 99 aa14.04□□□□□ -0.16
VRK3-225ENST00000601912 MAP1LC3B2A6NCE7 125 aa14.04□□□□□ -0.16
VRK3-225ENST00000601912 TPPP2P59282 170 aa14.04□□□□□ -0.16
VRK3-225ENST00000601912 TMEM95Q3KNT9 176 aa14.04□□□□□ -0.16
VRK3-225ENST00000601912 TIGITQ495A1 244 aa14.04□□□□□ -0.16
VRK3-225ENST00000601912 OR1L4Q8NGR5 311 aa14.04□□□□□ -0.16
VRK3-225ENST00000601912 PFDN5Q99471 154 aa14.04□□□□□ -0.16
VRK3-225ENST00000601912 MAP1LC3BQ9GZQ8 125 aa14.04□□□□□ -0.16
VRK3-225ENST00000601912 BAHCC1Q9P281 2608 aa14.03□□□□□ -0.16
VRK3-225ENST00000601912 RAB19A4D1S5 217 aa14.03□□□□□ -0.16
VRK3-225ENST00000601912 IGKV1-17P01599 117 aa14.03□□□□□ -0.16
VRK3-225ENST00000601912 IGLV1-40P01703 118 aa14.03□□□□□ -0.16
VRK3-225ENST00000601912 IGHV3-23P01764 117 aa14.03□□□□□ -0.16
VRK3-225ENST00000601912 RD3LP0DJH9 198 aa14.03□□□□□ -0.16
VRK3-225ENST00000601912 PF4V1P10720 104 aa14.03□□□□□ -0.16
VRK3-225ENST00000601912 CFHR3Q02985 330 aa14.03□□□□□ -0.16
VRK3-225ENST00000601912 SPSB3Q6PJ21 355 aa14.03□□□□□ -0.16
VRK3-225ENST00000601912 Q8N2B8 174 aa14.03□□□□□ -0.16
VRK3-225ENST00000601912 ZNF502Q8TBZ5 544 aa14.03□□□□□ -0.16
VRK3-225ENST00000601912 GATAD1Q8WUU5 269 aa14.03□□□□□ -0.16
VRK3-225ENST00000601912 USMG5Q96IX5 58 aa14.03□□□□□ -0.16
VRK3-225ENST00000601912 RNF2Q99496 336 aa14.03□□□□□ -0.16
VRK3-225ENST00000601912 DNAJC4Q9NNZ3 241 aa14.03□□□□□ -0.16
VRK3-225ENST00000601912 F8W735 103 aaPredicted RBP14.02□□□□□ -0.16
VRK3-225ENST00000601912 COX7A2P2O60397 106 aa14.02□□□□□ -0.16
VRK3-225ENST00000601912 YPEL3P61236 119 aaPredicted RBP14.02□□□□□ -0.16
VRK3-225ENST00000601912 SLC35B1P78383 322 aa14.02□□□□□ -0.16
VRK3-225ENST00000601912 FAM78BQ5VT40 261 aa14.02□□□□□ -0.16
VRK3-225ENST00000601912 SSX7Q7RTT5 188 aa14.02□□□□□ -0.16
VRK3-225ENST00000601912 ELOA3CA0A087WX78 387 aaPredicted RBP14.01□□□□□ -0.17
VRK3-225ENST00000601912 TMEM89A2RUT3 159 aa14.01□□□□□ -0.17
VRK3-225ENST00000601912 FAM181BA6NEQ2 426 aa14.01□□□□□ -0.17
VRK3-225ENST00000601912 OR2T8A6NH00 312 aa14.01□□□□□ -0.17
VRK3-225ENST00000601912 NUPL2O15504 423 aaKnown RBP14.01□□□□□ -0.17
VRK3-225ENST00000601912 PSG1P11464 419 aa14.01□□□□□ -0.17
VRK3-225ENST00000601912 EIF4E3Q8N5X7 224 aaKnown RBP14.01□□□□□ -0.17
VRK3-225ENST00000601912 ATP6V0BQ99437 205 aa14.01□□□□□ -0.17
VRK3-225ENST00000601912 SEPSECSQ9HD40 501 aaKnown RBP14.01□□□□□ -0.17
VRK3-225ENST00000601912 ESM1Q9NQ30 184 aa14.01□□□□□ -0.17
VRK3-225ENST00000601912 A0A0G2JLM5 398 aa14.01□□□□□ -0.17
VRK3-225ENST00000601912 HMGB3O15347 200 aaKnown RBP14.01□□□□□ -0.17
VRK3-225ENST00000601912 TOMM40O96008 361 aa14.01□□□□□ -0.17
VRK3-225ENST00000601912 IGHG4P01861 327 aa14.01□□□□□ -0.17
VRK3-225ENST00000601912 CRYBA1P05813 215 aa14.01□□□□□ -0.17
VRK3-225ENST00000601912 OR5G3P0C626 314 aa14.01□□□□□ -0.17
VRK3-225ENST00000601912 FGF8P55075 233 aaPredicted RBP14.01□□□□□ -0.17
VRK3-225ENST00000601912 RPL15P61313 204 aaKnown RBP14.01□□□□□ -0.17
VRK3-225ENST00000601912 C10orf113Q5VZT2 155 aa14.01□□□□□ -0.17
VRK3-225ENST00000601912 Q71RC1 249 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms