RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 HSPB1P04792 205 aaKnown RBP7.62□□□□□ -1.19
GGA3-209ENST00000580646 OR8U8P0C7N1 319 aa7.62□□□□□ -1.19
GGA3-209ENST00000580646 RNASE2P10153 161 aaKnown RBP7.62□□□□□ -1.19
GGA3-209ENST00000580646 FCGR2BP31994 310 aaPredicted RBP7.62□□□□□ -1.19
GGA3-209ENST00000580646 SNCAP37840 140 aa7.62□□□□□ -1.19
GGA3-209ENST00000580646 KRTAP10-11P60412 298 aa7.62□□□□□ -1.19
GGA3-209ENST00000580646 RAP2BP61225 183 aa7.62□□□□□ -1.19
GGA3-209ENST00000580646 ID3Q02535 119 aa7.62□□□□□ -1.19
GGA3-209ENST00000580646 ZNF616Q08AN1 781 aa7.62□□□□□ -1.19
GGA3-209ENST00000580646 C2orf83Q53S99 150 aa7.62□□□□□ -1.19
GGA3-209ENST00000580646 SLC16A13Q7RTY0 426 aa7.62□□□□□ -1.19
GGA3-209ENST00000580646 OR11H1Q8NG94 326 aa7.62□□□□□ -1.19
GGA3-209ENST00000580646 OR4D5Q8NGN0 318 aa7.62□□□□□ -1.19
GGA3-209ENST00000580646 EEF1AKMT3Q96AZ1 226 aa7.62□□□□□ -1.19
GGA3-209ENST00000580646 RAX2Q96IS3 184 aa7.62□□□□□ -1.19
GGA3-209ENST00000580646 CIB3Q96Q77 187 aaPredicted RBP7.62□□□□□ -1.19
GGA3-209ENST00000580646 MCRIP2Q9BUT9 160 aaKnown RBP7.62□□□□□ -1.19
GGA3-209ENST00000580646 HIPK2Q9H2X6 1198 aa7.62□□□□□ -1.19
GGA3-209ENST00000580646 PEF1Q9UBV8 284 aaKnown RBP7.62□□□□□ -1.19
GGA3-209ENST00000580646 C5orf52A6NGY3 159 aa7.61□□□□□ -1.19
GGA3-209ENST00000580646 CEBPZOSA8MTT3 80 aa7.61□□□□□ -1.19
GGA3-209ENST00000580646 LINC01619G3V211 115 aa7.61□□□□□ -1.19
GGA3-209ENST00000580646 TCAPO15273 167 aa7.61□□□□□ -1.19
GGA3-209ENST00000580646 NDUFB8O95169 186 aa7.61□□□□□ -1.19
GGA3-209ENST00000580646 GIPP09681 153 aaPredicted RBP7.61□□□□□ -1.19
GGA3-209ENST00000580646 SPP1P10451 314 aa7.61□□□□□ -1.19
GGA3-209ENST00000580646 HOXD3P31249 432 aaPredicted RBP7.61□□□□□ -1.19
GGA3-209ENST00000580646 MFAP2P55001 183 aa7.61□□□□□ -1.19
GGA3-209ENST00000580646 EGFEM1PQ0D2K5 195 aa7.61□□□□□ -1.19
GGA3-209ENST00000580646 DEFB136Q30KP8 78 aa7.61□□□□□ -1.19
GGA3-209ENST00000580646 SLC25A24Q6NUK1 477 aa7.61□□□□□ -1.19
GGA3-209ENST00000580646 C19orf35Q6ZS72 473 aa7.61□□□□□ -1.19
GGA3-209ENST00000580646 SLC24A4Q8NFF2 622 aa7.61□□□□□ -1.19
GGA3-209ENST00000580646 OR11H7Q8NGC8 314 aa7.61□□□□□ -1.19
GGA3-209ENST00000580646 OR1N2Q8NGR9 330 aa7.61□□□□□ -1.19
GGA3-209ENST00000580646 DTD1Q8TEA8 209 aa7.61□□□□□ -1.19
GGA3-209ENST00000580646 DPF1Q92782 380 aa7.61□□□□□ -1.19
GGA3-209ENST00000580646 RBKSQ9H477 322 aa7.61□□□□□ -1.19
GGA3-209ENST00000580646 HEYLQ9NQ87 328 aaPredicted RBP7.61□□□□□ -1.19
GGA3-209ENST00000580646 GAR1Q9NY12 217 aaKnown RBP7.61□□□□□ -1.19
GGA3-209ENST00000580646 IGHV4OR15-8A0A075B7B6 117 aa7.6□□□□□ -1.19
GGA3-209ENST00000580646 A0A087WW49 117 aa7.6□□□□□ -1.19
GGA3-209ENST00000580646 A0A1B0GV90 55 aa7.6□□□□□ -1.19
GGA3-209ENST00000580646 HMSDA8MTL9 139 aa7.6□□□□□ -1.19
GGA3-209ENST00000580646 TSTD3H0UI37 97 aa7.6□□□□□ -1.19
GGA3-209ENST00000580646 I3L2K1 104 aa7.6□□□□□ -1.19
GGA3-209ENST00000580646 K7EIL1 84 aa7.6□□□□□ -1.19
GGA3-209ENST00000580646 K7EIM0 57 aa7.6□□□□□ -1.19
GGA3-209ENST00000580646 SYNGR2O43760 224 aa7.6□□□□□ -1.19
GGA3-209ENST00000580646 IGHV3-11P01762 117 aa7.6□□□□□ -1.19
GGA3-209ENST00000580646 NKX2-1P43699 371 aaPredicted RBP7.6□□□□□ -1.19
GGA3-209ENST00000580646 C21orf62-AS1Q17RA5 79 aa7.6□□□□□ -1.19
GGA3-209ENST00000580646 IAH1Q2TAA2 248 aaPredicted RBP7.6□□□□□ -1.19
GGA3-209ENST00000580646 SPINK9Q5DT21 86 aa7.6□□□□□ -1.19
GGA3-209ENST00000580646 ZNF502Q8TBZ5 544 aa7.6□□□□□ -1.19
GGA3-209ENST00000580646 RNASEH2CQ8TDP1 164 aaKnown RBP7.6□□□□□ -1.19
GGA3-209ENST00000580646 OR10C1Q96KK4 312 aa7.6□□□□□ -1.19
GGA3-209ENST00000580646 TXN2Q99757 166 aa7.6□□□□□ -1.19
GGA3-209ENST00000580646 WI2-2373I1.2A0A1W2PRP0 233 aa7.59□□□□□ -1.19
GGA3-209ENST00000580646 TMEM218A2RU14 115 aa7.59□□□□□ -1.19
GGA3-209ENST00000580646 SSNA1O43805 119 aa7.59□□□□□ -1.19
GGA3-209ENST00000580646 CFDP00746 253 aaPredicted RBP7.59□□□□□ -1.19
GGA3-209ENST00000580646 NPY1RP25929 384 aa7.59□□□□□ -1.19
GGA3-209ENST00000580646 S100A11P31949 105 aa7.59□□□□□ -1.19
GGA3-209ENST00000580646 TAS2R30P59541 319 aa7.59□□□□□ -1.19
GGA3-209ENST00000580646 RPP30P78346 268 aaKnown RBP7.59□□□□□ -1.19
GGA3-209ENST00000580646 SPSB3Q6PJ21 355 aa7.59□□□□□ -1.19
GGA3-209ENST00000580646 GSG1LQ6UXU4 331 aa7.59□□□□□ -1.19
GGA3-209ENST00000580646 C15orf54Q8N8G6 183 aa7.59□□□□□ -1.19
GGA3-209ENST00000580646 OR11H4Q8NGC9 324 aa7.59□□□□□ -1.19
GGA3-209ENST00000580646 OR2T35Q8NGX2 323 aa7.59□□□□□ -1.19
GGA3-209ENST00000580646 BSCL2Q96G97 398 aaPredicted RBP7.59□□□□□ -1.19
GGA3-209ENST00000580646 C2orf50Q96LR7 162 aa7.59□□□□□ -1.19
GGA3-209ENST00000580646 CCDC140Q96MF4 163 aa7.59□□□□□ -1.19
GGA3-209ENST00000580646 OR5B12Q96R08 314 aa7.59□□□□□ -1.19
GGA3-209ENST00000580646 C21orf62Q9NYP8 219 aa7.59□□□□□ -1.19
GGA3-209ENST00000580646 CARHSP1Q9Y2V2 147 aaKnown RBP7.59□□□□□ -1.19
GGA3-209ENST00000580646 CHTOPQ9Y3Y2 248 aaKnown RBP7.59□□□□□ -1.19
GGA3-209ENST00000580646 NXPH3O95157 252 aa7.58□□□□□ -1.2
GGA3-209ENST00000580646 LINC00614P0C842 121 aa7.58□□□□□ -1.2
GGA3-209ENST00000580646 PKIAP61925 76 aa7.58□□□□□ -1.2
GGA3-209ENST00000580646 IL15RAQ13261 267 aa7.58□□□□□ -1.2
GGA3-209ENST00000580646 PEA15Q15121 130 aa7.58□□□□□ -1.2
GGA3-209ENST00000580646 DEFB121Q5J5C9 76 aa7.58□□□□□ -1.2
GGA3-209ENST00000580646 ETFRF1Q6IPR1 90 aa7.58□□□□□ -1.2
GGA3-209ENST00000580646 ATRAIDQ6UW56 229 aa7.58□□□□□ -1.2
GGA3-209ENST00000580646 THAP6Q8TBB0 222 aa7.58□□□□□ -1.2
GGA3-209ENST00000580646 RAB24Q969Q5 203 aa7.58□□□□□ -1.2
GGA3-209ENST00000580646 PHYHIPLQ96FC7 376 aa7.58□□□□□ -1.2
GGA3-209ENST00000580646 MISP3Q96FF7 219 aa7.58□□□□□ -1.2
GGA3-209ENST00000580646 SMIM8Q96KF7 97 aa7.58□□□□□ -1.2
GGA3-209ENST00000580646 RAB40CQ96S21 281 aa7.58□□□□□ -1.2
GGA3-209ENST00000580646 KRTAP17-1Q9BYP8 105 aa7.58□□□□□ -1.2
GGA3-209ENST00000580646 NMES1Q9C002 83 aa7.58□□□□□ -1.2
GGA3-209ENST00000580646 C5orf51A6NDU8 294 aa7.57□□□□□ -1.2
GGA3-209ENST00000580646 F8W735 103 aaPredicted RBP7.57□□□□□ -1.2
GGA3-209ENST00000580646 BMPR1BO00238 502 aa7.57□□□□□ -1.2
GGA3-209ENST00000580646 CCSO14618 274 aa7.57□□□□□ -1.2
GGA3-209ENST00000580646 TGOLN2O43493 480 aa7.57□□□□□ -1.2
GGA3-209ENST00000580646 GGCTO75223 188 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms